Paracoccus thiocyanatus (CIP 106060, IAM 12816, IFO 14569)

Name: Paracoccus thiocyanatus (CIP 106060, IAM 12816, IFO 14569)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135951

Type strain

Culture col. no. CIP 106060 IAM 12816 IFO 14569 VKM B-2162 NCIMB 13627 3 more

NCBI tax ID(s) 34006

Special Collections JCM CIP

History JCM <-- IAM 12816 <-- Y. Katayama THI 011 <-- H. Murooka 1-8A. CIP <- 1999, IFO <- IAM <- Y. Fujimura & H. Kuraishi <- H. Murooka

Links

Paracoccus thiocyanatus CIP 106060 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from Activated sludge.

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46218

ATCC 700171,IAM 12816,IFO 14569,CIP 106060,NCIMB 13627,KCTC 2839,VKM B-2162,KCTC 2848,KCTC 2874,NBRC 14569,JCM 20756,LMG 24666

@ref 20215

Last LPSN update 2026-05-29 08:38:41

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Paracoccaceae

Genus Paracoccus

Species Paracoccus thiocyanatus

Full scientific name Paracoccus thiocyanatus Katayama et al. 1996

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
35239	negative	rod-shaped
125439	negative		97.265
125438	negative		99

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
35239	MEDIUM 127 - for Streptomyces scabiei and Thiobacillus novellus		Distilled water make up to (1000.000 ml);Magnesium sulphate heptahydrate (0.100 g);Agar (15.000 g);Yeast extract (5.000 g);Potassium di-hydrogen phosphate (1.500 g);Ammonium chloride (0.300 g);Sodium thiosulphate pentahydrate (5.000 g);Di Sodium hydrogen
35239	CIP Medium 127			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
35239	positive	growth	30
35239	positive	growth	25-37
35239	negative	growth	5
35239	negative	growth	10
35239	negative	growth	41
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
35239	obligate aerobe
125439	obligate aerobe	96.697

Spore formation

@ref	Spore formation	Confidence
125439		99.232
125438		92.157

Halophily

@ref	Salt	Growth	Tested relation	Concentration
35239	NaCl	positive	growth	0-4 %
35239	NaCl		growth	6 %
35239	NaCl		growth	8 %
35239	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
35239	4853 ChEBI	esculin	-	hydrolysis
35239	17632 ChEBI	nitrate	+	reduction
35239	16301 ChEBI	nitrite	+	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
35239	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
35239	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
35239	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
35239	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
35239	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
35239	caseinase	-	3.4.21.50
35239	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
35239	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
35239	gelatinase	-
35239	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
35239	lipase	-
68382	lipase (C 14)	-		from API zym
35239	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
35239	ornithine decarboxylase	-	4.1.1.17
35239	oxidase	+
35239	protease	-
68382	trypsin	-	3.4.21.4	from API zym
35239	tryptophan deaminase	-
35239	tween esterase	-
35239	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	biotin biosynthesis	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	formaldehyde oxidation	100	3 of 3
66794	ethanol fermentation	100	2 of 2
66794	enterobactin biosynthesis	100	3 of 3
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	Entner Doudoroff pathway	100	10 of 10
66794	octane oxidation	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	4-hydroxymandelate degradation	100	9 of 9
66794	propanol degradation	100	7 of 7
66794	starch degradation	100	10 of 10
66794	threonine metabolism	100	10 of 10
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	gluconeogenesis	100	8 of 8
66794	ppGpp biosynthesis	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	butanoate fermentation	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	denitrification	100	2 of 2
66794	glycogen biosynthesis	100	4 of 4
66794	photosynthesis	92.86	13 of 14
66794	phenylalanine metabolism	92.31	12 of 13
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	ketogluconate metabolism	87.5	7 of 8
66794	glutathione metabolism	85.71	12 of 14
66794	citric acid cycle	85.71	12 of 14
66794	glutamate and glutamine metabolism	85.71	24 of 28
66794	leucine metabolism	84.62	11 of 13
66794	glycogen metabolism	80	4 of 5
66794	propionate fermentation	80	8 of 10
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	chorismate metabolism	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	isoleucine metabolism	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	pentose phosphate pathway	72.73	8 of 11
66794	vitamin B6 metabolism	72.73	8 of 11
66794	purine metabolism	72.34	68 of 94
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	vitamin B1 metabolism	69.23	9 of 13
66794	degradation of pentoses	67.86	19 of 28
66794	cyanate degradation	66.67	2 of 3
66794	lipid A biosynthesis	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	oxidative phosphorylation	65.93	60 of 91
66794	tryptophan metabolism	65.79	25 of 38
66794	glycolysis	64.71	11 of 17
66794	vitamin B12 metabolism	64.71	22 of 34
66794	degradation of sugar acids	64	16 of 25
66794	proline metabolism	63.64	7 of 11
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	alanine metabolism	62.07	18 of 29
66794	lysine metabolism	61.9	26 of 42
66794	methionine metabolism	61.54	16 of 26
66794	vitamin K metabolism	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	peptidoglycan biosynthesis	60	9 of 15
66794	3-chlorocatechol degradation	60	3 of 5
66794	gallate degradation	60	3 of 5
66794	cellulose degradation	60	3 of 5
66794	elloramycin biosynthesis	60	3 of 5
66794	non-pathway related	57.89	22 of 38
66794	allantoin degradation	55.56	5 of 9
66794	aspartate and asparagine metabolism	55.56	5 of 9
66794	pyrimidine metabolism	55.56	25 of 45
66794	cysteine metabolism	55.56	10 of 18
66794	metabolism of disaccharids	54.55	6 of 11
66794	arginine metabolism	54.17	13 of 24
66794	phosphatidylethanolamine bioynthesis	53.85	7 of 13
66794	urea cycle	53.85	7 of 13
66794	3-phenylpropionate degradation	53.33	8 of 15
66794	histidine metabolism	51.72	15 of 29
66794	lipid metabolism	51.61	16 of 31
66794	isoprenoid biosynthesis	50	13 of 26
66794	sulfopterin metabolism	50	2 of 4
66794	pantothenate biosynthesis	50	3 of 6
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	ribulose monophosphate pathway	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	heme metabolism	50	7 of 14
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	acetate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	phenol degradation	50	10 of 20
66794	tetrahydrofolate metabolism	50	7 of 14
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	lactate fermentation	50	2 of 4
66794	glycine metabolism	50	5 of 10
66794	cyclohexanol degradation	50	2 of 4
66794	toluene degradation	50	2 of 4
66794	degradation of hexoses	50	9 of 18
66794	flavin biosynthesis	46.67	7 of 15
66794	sulfate reduction	46.15	6 of 13
66794	nitrate assimilation	44.44	4 of 9
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	tyrosine metabolism	42.86	6 of 14
66794	ascorbate metabolism	40.91	9 of 22
66794	lipoate biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	coenzyme M biosynthesis	40	4 of 10
66794	arachidonic acid metabolism	38.89	7 of 18
66794	carnitine metabolism	37.5	3 of 8
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	sphingosine metabolism	33.33	2 of 6
66794	polyamine pathway	30.43	7 of 23
66794	myo-inositol biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	d-xylose degradation	27.27	3 of 11
66794	alginate biosynthesis	25	1 of 4
66794	coenzyme A metabolism	25	1 of 4
66794	phenylpropanoid biosynthesis	23.08	3 of 13

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
35239	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
35239	not determinedn.d.	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	-	-	-	-	+	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	-	-	+	-	+	-	+	-	-	+	-	-	+	+	-	-	-	-	-	+	-	+	+	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Activated sludge	Japan	JPN	Asia
35239	Environment, Activated sludge

Taxonmaps

69479

Global distribution of 16S sequence D32242 (>99% sequence identity) for Paracoccus thiocyanatus subclade from Microbeatlas

Aquatic Samples	22
Soil Samples	5
Animal Samples	9
Plant Samples	9
Total Samples	45

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
35239	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2681812813 annotated assembly for Paracoccus thiocyanatus ATCC 700171	scaffold	GCA_900156255	34006.7	2681812813	34006	65.92

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Paracoccus thiocyanatus gene for 16S rRNA, partial sequence, strain: NBRC 14569	AB680635	1388		34006
67770	Paracoccus thiocyanatus gene for 16S rRNA, strain: THI 011	D32242	1384		34006

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2681812813 annotated assembly for Paracoccus thiocyanatus ATCC 700171
BV-BRC: 34006.7

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.70	no
125439	gram_stain	BacteriaNetⓘ	negative	97.27	no
125439	spore_formation	BacteriaNetⓘ	no	99.23	no
125439	motility	BacteriaNetⓘ	yes	51.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paracoccus thiocyanatus ATCC 700171
NCBI: GCA_900156255.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	96.11	yes
125438	aerobic	aerobicⓘ	yes	81.34	no
125438	spore-forming	spore-formingⓘ	no	92.16	no
125438	thermophilic	thermophileⓘ	no	94.10	yes
125438	flagellated	motile2+ⓘ	no	61.04	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Two pathways for thiosulfate oxidation in the alphaproteobacterial chemolithotroph Paracoccus thiocyanatus SST.	Rameez MJ, Pyne P, Mandal S, Chatterjee S, Alam M, Bhattacharya S, Mondal N, Sarkar J, Ghosh W.	Microbiol Res	10.1016/j.micres.2019.126345	2020
Metabolism	Bacteria involved in sulfur amendment oxidation and acidification processes of alkaline 'alperujo' compost.	Garcia-de-la-Fuente R, Cuesta G, Sanchis-Jimenez E, Botella S, Abad M, Fornes F.	Bioresour Technol	10.1016/j.biortech.2010.09.103	2011
Metabolism	Chemolithoautotrophic oxidation of thiosulfate, tetrathionate and thiocyanate by a novel rhizobacterium belonging to the genus Paracoccus.	Ghosh W, Roy P.	FEMS Microbiol Lett	10.1111/j.1574-6968.2007.00670.x	2007
	Heterotrophic Sulfur Oxidation of Halomonas titanicae SOB56 and Its Habitat Adaptation to the Hydrothermal Environment.	Du R, Gao D, Wang Y, Liu L, Cheng J, Liu J, Zhang XH, Yu M.	Front Microbiol	10.3389/fmicb.2022.888833	2022
Genetics	Thermal Endurance by a Hot-Spring-Dwelling Phylogenetic Relative of the Mesophilic Paracoccus.	Mondal N, Roy C, Chatterjee S, Sarkar J, Dutta S, Bhattacharya S, Chakraborty R, Ghosh W.	Microbiol Spectr	10.1128/spectrum.01606-22	2022
Enzymology	Comparative Genome Analysis of Three Thiocyanate Oxidizing Thioalkalivibrio Species Isolated from Soda Lakes.	Berben T, Overmars L, Sorokin DY, Muyzer G.	Front Microbiol	10.3389/fmicb.2017.00254	2017
	Global Association between Thermophilicity and Vancomycin Susceptibility in Bacteria.	Roy C, Alam M, Mandal S, Haldar PK, Bhattacharya S, Mukherjee T, Roy R, Rameez MJ, Misra AK, Chakraborty R, Nanda AK, Mukhopadhyay SK, Ghosh W.	Front Microbiol	10.3389/fmicb.2016.00412	2016
Metabolism	Involvement of membrane vesicles in long-chain-AHL delivery in Paracoccus species.	Morinaga K, Nagakubo T, Nomura N, Toyofuku M	Environ Microbiol Rep	10.1111/1758-2229.12843	2020
Genetics	Characterization of the replicator region of megaplasmid pTAV3 of Paracoccus versutus and search for plasmid-encoded traits.	Bartosik D, Baj J, Bartosik AA, Wlodarczyk M	Microbiology (Reading)	10.1099/00221287-148-3-871	2002
	Genomic evidence for two pathways of formaldehyde oxidation and denitrification capabilities of the species Paracoccus methylovorus sp. nov.	Timsy T, Behrendt U, Ulrich A, Foesel BU, Spanner T, Neumann-Schaal M, Wolf J, Schloter M, Horn MA, Kolb S.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005581	2022
Phylogeny	Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus.	Katayama Y, Hiraishi A, Kuraishi H.	Microbiology (Reading)	10.1099/13500872-141-6-1469	1995

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35239	Collection of Institut Pasteur ; Curators of the CIP; CIP 106060
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paracoccus thiocyanatus (CIP 106060, IAM 12816, IFO 14569)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Pathway annotation

API zym

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900156255

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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