Helicobacter pylori (CIP 106780, JCM 12097, 26695)

Name: Helicobacter pylori (CIP 106780, JCM 12097, 26695)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 135934

Type strain

Strain Designation 26695

Culture col. no. CIP 106780 JCM 12097 26695

NCBI tax ID(s) 210

Special Collections JCM CIP

History JCM <-- CIP 106780 <-- D. Berg 26695. CIP <- 2000, D. Berg - Washington Univ., St Louis, MO, USA: strain 26695

Links

Helicobacter pylori 26695 is a Gram-negative, motile, rod-shaped bacterium of the family Helicobacteraceae.

Gram-negative motile rod-shaped genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 68848

CIP 106780,JCM 12097

@ref 20215

Last LPSN update 2026-05-29 08:38:41

Domain Bacteria

Phylum Pseudomonadota

Class Epsilonproteobacteria

Order Campylobacterales

Family Helicobacteraceae

Genus Helicobacter

Species Helicobacter pylori

Full scientific name Helicobacter pylori (Marshall et al. 1985) Goodwin et al. 1989

Synonyms (3)

Campylobacter pylori
Campylobacter pyloridis
Helicobacter nemestrinae

BacDive ID	Other strains from **Helicobacter pylori** (69)	Type strain
6102	H. pylori RPH 13487, CCUG 15815, LMG 7540, CIP 103995, ... (type strain)
6099	H. pylori T81213-NTB, T81123-NTB, DSM 7492, ATCC 49396, ...
6100	H. pylori Göteborg 113, DSM 9691, CCUG 21658
6101	H. pylori RPH 13491, DSM 10242, NCTC 11638, CCUG 17875, ...
24099	H. pylori ASTRA J99, J99, DSM 28160, CCUG 47164, ATCC ...
135116	H. pylori 85P, CIP 104086, JCM 12095
135395	H. pylori N6, CIP 104085, JCM 12094
137187	H. pylori CGLO-1, CIP 101260, JCM 12092, CCUG 18943, ...
142935	H. pylori CCUG 15815 B
142936	H. pylori CCUG 15816 B, LMG 8773
142937	H. pylori CCUG 15817
142938	H. pylori CCUG 15818, ATCC 43629, NCTC 11639, LMG 8927, ...
143086	H. pylori CCUG 17135, CCUG 17073
143299	H. pylori CCUG 18295
143328	H. pylori CCUG 18430
143425	H. pylori CCUG 19087
143430	H. pylori CCUG 19104
143431	H. pylori CCUG 19106, LMG 8775
143432	H. pylori CCUG 19107
143433	H. pylori CCUG 19110
143627	H. pylori CCUG 20649
143831	H. pylori CCUG 21365
143840	H. pylori CCUG 21460
143952	H. pylori CCUG 22032
143953	H. pylori CCUG 22035
143954	H. pylori CCUG 22036
143955	H. pylori CCUG 22037
143964	H. pylori CCUG 22110
143980	H. pylori CCUG 22225, LMG 8164
144370	H. pylori CCUG 24780
146346	H. pylori CCUG 30985
146347	H. pylori CCUG 30986
146348	H. pylori CCUG 30987
146349	H. pylori CCUG 30988
146350	H. pylori CCUG 30989
146351	H. pylori CCUG 30990
146352	H. pylori CCUG 30992
146353	H. pylori CCUG 30993
146354	H. pylori CCUG 30994
146462	H. pylori CCUG 31209
148598	H. pylori CCUG 35689
148752	H. pylori CCUG 35899
148764	H. pylori CCUG 35914
149009	H. pylori CCUG 36718
149010	H. pylori CCUG 36719
149969	H. pylori CCUG 38770
149970	H. pylori CCUG 38771
149971	H. pylori CCUG 38772
150213	H. pylori CCUG 39297
150435	H. pylori CCUG 39924
150675	H. pylori CCUG 41936, ATCC 700392, NCTC 12455
152974	H. pylori CCUG 48166
156766	H. pylori CCUG 64957
157640	H. pylori 82894, DSM 105195
157641	H. pylori 85107, DSM 105196
157642	H. pylori 87041, DSM 105197
157643	H. pylori 86298, DSM 105198
157644	H. pylori 85369, DSM 105199
157645	H. pylori 85592, DSM 105200
157646	H. pylori 86153, DSM 105260
157647	H. pylori 83321, DSM 105261
157648	H. pylori G27, DSM 105292
157649	H. pylori J166, DSM 105293
157650	H. pylori PMSS1, DSM 105294
157651	H. pylori 2808, DSM 105296
157652	H. pylori Sydney strain, SS1, DSM 105297
157653	H. pylori Tx30, DSM 105400, ATCC 51932
157654	H. pylori 85593, DSM 105470
157655	H. pylori 85866, DSM 105471

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
35213	negative	rod-shaped

Colony morphology

35213

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
35213	MEDIUM 45 - for Columbia agar with sheep blood	Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
35213	CIP Medium 45		Medium recipe at CIP
35213	Brucella broth

Culture temp

@ref	Growth	Type	Temperature (°C)
35213	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	97.648

Spore formation

@ref	Spore formation	Confidence
125439		99.895

Halophily

@ref	Salt	Growth	Tested relation	Concentration
35213	NaCl		growth	3.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
35213	606565 ChEBI	hippurate	-	hydrolysis
35213	17632 ChEBI	nitrate	-	reduction
35213	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
35213	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
35213	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
35213	gamma-glutamyltransferase	+	2.3.2.2
35213	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
35213	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
35213	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
35213	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent	Isolation date
35213			United Kingdom	GBR	Europe
67770	Patient in the United Kingdom with gastritis	Homo sapiens
35213	Human, Gastritis	Homo sapiens	United States of America	USA	North America	1989

Taxonmaps

69479

Global distribution of 16S sequence LC507450 (>99% sequence identity) for Helicobacter pylori subclade from Microbeatlas

Aquatic Samples	829
Soil Samples	670
Animal Samples	16307
Plant Samples	278
Total Samples	18084

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
35213	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM852v1 assembly for Helicobacter pylori 26695	complete	GCA_000008525	85962.8	637000132	85962	73.56

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Helicobacter pylori JCM 12097 gene for 16S ribosomal RNA, partial sequence	LC507450	1426		210

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM852v1 assembly for Helicobacter pylori 26695
NCBI: GCA_000008525

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	97.65	no
125439	gram_stain	BacteriaNetⓘ	negative	49.54	no
125439	motility	BacteriaNetⓘ	no	68.12	no
125439	spore_formation	BacteriaNetⓘ	no	99.90	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35213	Collection of Institut Pasteur ; Curators of the CIP; CIP 106780
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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