Agrobacterium radiobacter (DSM 30205, ATCC 23308, CCM 1040)

Name: Agrobacterium radiobacter (DSM 30205, ATCC 23308, CCM 1040)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13584

Type strain

Strain Designation B 6, B6

Culture col. no. DSM 30205 ATCC 23308 CCM 1040 CIP B6 DSM 60574 17 more

NCBI tax ID(s) 362

Special Collections DSMZ CCUG JCM CIP

History <- DSM 60574 <- J. De Ley <- CIP <- A.C. Braun, B 6 (1934) IAM 13129 <-- ATCC 23308 <-- M. P. Starr TT3 <-- A. C. Braun B6. CIP <- 1967, P. Manigault <- A.C. Braun: strain B6

Links

Agrobacterium radiobacter B 6 is an aerobe, Gram-negative, motile plant pathogen that was isolated from Malus sp., crown gall of apple seedling.

Gram-negative motile rod-shaped aerobe plant pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 419

LMG 187,ATCC 23308,CCM 1040,CCUG 725,ICMP 5856,LMG 28,NCPPB 2437,NCPPB 397,PDDCC 5856,IAM 13129,NCIMB 13307,IMI 347314,CCM 2928,CIP 67.1,LMD 64.1,CECT 4119,CCRC 13210,CFBP 2413,NCAIM B.01287,NCCB 64001,BCRC 13210,HAMBI 1811,KACC 10736,NBIMCC 3310,NBRC 102589,CGMCC 1.2554,CFBP 42,JCM 20845,DSM 30205,DSM 60574

@ref 20215

Last LPSN update 2026-02-09 11:21:11

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Rhizobiaceae

Genus Agrobacterium

Species Agrobacterium radiobacter

Full scientific name Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980)

Synonyms (3)

"Bacillus radiobacter"
Rhizobium radiobacter
Beijerinckia fluminensis

BacDive ID	Other strains from **Agrobacterium radiobacter** (59)	Type strain
13580	A. radiobacter DSM 30147, ATCC 19358, IFO 13532, NBRC 13532, ... (type strain)
13581	A. radiobacter A 1, CCUG 3355, DSM 30150, ATCC 4720, CCM ... (type strain)
13576	A. radiobacter AK205, DSM 7215
13577	A. radiobacter d3I, DSM 9674
13579	A. radiobacter DSM 13874, NCPPB 4043
13582	A. radiobacter M 2/1, DSM 30199, DSM 60577, JCM 20987, IAM ...
13585	A. radiobacter F/1, DSM 30206, DSM 60575
13586	A. radiobacter 3/1, DSM 30207, DSM 60576
13587	A. radiobacter H-100, DSM 30208, DSM 60579, NCPPB 3837, ...
13589	A. radiobacter DSM 2108, CRIPP D57
100184	A. radiobacter ST032833(HKI), E008,
100185	A. radiobacter ST033150(HKI),
100186	A. radiobacter ST032607(HKI), F114a,
24476	A. radiobacter DSM 2327, UQM 1685, CCUG 53676, CIP 106281, ...
24823	A. radiobacter GV3101(pMP90), DSM 12364
134748	A. radiobacter B6 Tr, CIP 74.29
134990	A. radiobacter CIP 102835
136296	A. radiobacter CIP 104327, ATCC 6466, IFO 13127, JCM 20200, ...
136689	A. radiobacter 90A, CIP 107749, CCUG 51326
137356	A. radiobacter B62, CIP 104334, ATCC 11157
137357	A. radiobacter TT134, 6-1-2, CIP 104336, ATCC 15955
137527	A. radiobacter 500, CIP 70.51, ATCC 17983
137660	A. radiobacter 81.83, CIP 100088
137664	A. radiobacter C58, CIP 104333, ATCC 33970
137832	A. radiobacter CIP 101091
137982	A. radiobacter 358-86, CIP 102371
139082	A. radiobacter CIP 104326, ATCC 4718, JCM 20199, IAM 1526, ...
139214	A. radiobacter 572-85, CIP 101768
141516	A. radiobacter CCUG 2516, NRRL B-181
141594	A. radiobacter CCUG 3370
142441	A. radiobacter CCUG 12508
142442	A. radiobacter CCUG 12509, LMG 385
143154	A. radiobacter CCUG 17511
145747	A. radiobacter CCUG 29471
146695	A. radiobacter CCUG 31962
146956	A. radiobacter CCUG 32540
146960	A. radiobacter CCUG 32544
147074	A. radiobacter CCUG 32799
147077	A. radiobacter CCUG 32804
147384	A. radiobacter CCUG 33502
147440	A. radiobacter CCUG 33585
150676	A. radiobacter CCUG 41940
150928	A. radiobacter CCUG 42766
152911	A. radiobacter CCUG 47961
153141	A. radiobacter CCUG 48560
153176	A. radiobacter CCUG 48648
153197	A. radiobacter CCUG 48700 B
153447	A. radiobacter CCUG 49619
153627	A. radiobacter CCUG 50385 B
157291	A. radiobacter IMI 347314
157292	A. radiobacter IMI 350781
157293	A. radiobacter IMI 347313
157294	A. radiobacter IMI 347316
157295	A. radiobacter IMI 347322
157296	A. radiobacter IMI 347323
157297	A. radiobacter IMI 347324
157298	A. radiobacter IMI 347312
157514	A. radiobacter IMI 389299
157515	A. radiobacter IMI 505624a

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
122121	negative	rod-shaped
125439	negative		99
125438	negative		98.333

Colony morphology

@ref	Incubation period
9202	1-2 days
122121

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
36619	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
9202	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
68368	MacConkey medium			from API 20E
122121	CIP Medium 3	Medium recipe at CIP
122121	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
9202	positive	growth	26
36619	positive	growth	30
44253	positive	growth	37
67770	positive	growth	25
122121	positive	growth	30-37
122121	negative	growth	5
122121	negative	growth	10
122121	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
44253	aerobe
122121	obligate aerobe
125439	obligate aerobe	96.2

Spore formation

@ref	Spore formation	Confidence
122121
125439		98.1
125438		94.63

Halophily

@ref	Salt	Growth	Tested relation	Concentration
122121	NaCl	positive	growth	0-2 %
122121	NaCl		growth	4 %
122121	NaCl		growth	6 %
122121	NaCl		growth	8 %
122121	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68368	27613 ChEBI	amygdalin	+	fermentation	from API 20E
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
122121	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68368	17634 ChEBI	D-glucose	-	fermentation	from API 20E
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68368	16899 ChEBI	D-mannitol	-	fermentation	from API 20E
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
122121	4853 ChEBI	esculin	+	hydrolysis
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68368	30849 ChEBI	L-arabinose	+	fermentation	from API 20E
68368	62345 ChEBI	L-rhamnose	-	fermentation	from API 20E
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
122121	15792 ChEBI	malonate	-	assimilation
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68368	28053 ChEBI	melibiose	-	fermentation	from API 20E
68368	17268 ChEBI	myo-inositol	+	fermentation	from API 20E
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
122121	17632 ChEBI	nitrate	-	builds gas from
122121	17632 ChEBI	nitrate	-	reduction
122121	17632 ChEBI	nitrate	-	respiration
68368	17632 ChEBI	nitrate	+	reduction	from API 20E
122121	16301 ChEBI	nitrite	-	builds gas from
122121	16301 ChEBI	nitrite	+	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68368	30911 ChEBI	sorbitol	-	fermentation	from API 20E
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
122121	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68369	35581 ChEBI	indole	from API 20NE
122121	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E
68368	16301 ChEBI	nitrite	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
122121	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
122121	17234 ChEBI	glucose		+
68369	35581 ChEBI	indole			-	from API 20NE
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
122121	alcohol dehydrogenase	-	1.1.1.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122121	amylase	-
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
122121	beta-galactosidase	+	3.2.1.23
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
9202	catalase	+	1.11.1.6
122121	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68368	cytochrome oxidase	+	1.9.3.1	from API 20E
9202	cytochrome-c oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
122121	gelatinase	-
68369	gelatinase	-		from API 20NE
68368	gelatinase	-		from API 20E
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
122121	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
122121	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
122121	oxidase	+
122121	urease	+	3.5.1.5
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

44253

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	77.6	17.824
C16:0	9.1	16
C14:0 3OH/C16:1 ISO I	6.1	15.485
C19:0 CYCLO ω8c	3.6	18.9
C16:0 3OH	2.2	17.52
C16:1 ω7c	1.5	15.819

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
9202	+	-	-	-	+	-	+	+/-	-	-	-	-	-	+	-	-	+/-	-	+	+	+	+	not determinedn.d.	not determinedn.d.	+	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
44253	-	-	+	+	-	+	-	-	-	-	+	-	-	-	-	+	+	+	-	-
44253	-	+	+	-	-	+	-	-	+	-	+	+	-	-	-	+	+	+	-	-
122121	-	+	+	-	-	+	-	-	-	-	+	+	-	+	-	+	+	+	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
9202	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	+	-	-	-	+/-	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	+
9202	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	+
9202	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	-	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	-	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	-	-	-	-	+/-	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
9202	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	not determinedn.d.
44253	+	-	-	-	+	+	-	+	+	+	+	+	+	+	+	-	-	+	-	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122121	not determinedn.d.	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	+	-	+	-	-	-	-	-	-	+	+	+	+	-	-	+	+	+	+	-	+	+	-	+	+	+	-	-	-	-	-	-	+	-	+	-	+	-	-	-	+	+	+	-	-	+	-	+	-	-	+	+	+	-	+	+	-	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree
#Host Body-Site	#Plant	-
#Infection	#Plant infections	#Gall

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Host species
9202	Malus sp., crown gall of apple seedling					Malus
44253	Apple tree,tumour,'crown gall'
67770	Apple seedling crown gall	IA	USA	USA	North America
122121	Plant, Apple tree, Crown gall

Taxonmaps

69479

Global distribution of 16S sequence AB681869 (>99% sequence identity) for Agrobacterium from Microbeatlas

Aquatic Samples	822
Soil Samples	595
Animal Samples	3746
Plant Samples	731
Total Samples	5894

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity plant	Biosafety level	Biosafety level comment
9202	yes, in single cases		1	Risk group (German classification) According to TRBA 466
122121			1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
67770	35377_C01 assembly for Agrobacterium tumefaciens NCTC13543	contig	GCA_900455815	358.254	358	39.23

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Agrobacterium tumefaciens gene for 16S rRNA, partial sequence, strain: NBRC 102589	AB681869	1410	358
20218	Agrobacterium tumefaciens strain DSM 30205 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence	AF345274	1087	358
67770	Agrobacterium tumefaciens gene for 16S rRNA, strain: IAM 13129	D12784	1438	358

GC content

9202

GC-content (mol%)60.2

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Agrobacterium tumefaciens NCTC13543
NCBI: GCA_900455815

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.10	no
125439	motility	BacteriaNetⓘ	yes	60.00	no
125439	gram_stain	BacteriaNetⓘ	negative	99.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Agrobacterium tumefaciens strain NCTC13543
PATRIC: 358.254

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.33	no
125438	anaerobic	anaerobicⓘ	no	96.08	yes
125438	spore-forming	spore-formingⓘ	no	94.63	no
125438	aerobic	aerobicⓘ	yes	82.85	yes
125438	thermophilic	thermophileⓘ	no	99.25	yes
125438	flagellated	motile2+ⓘ	yes	67.40	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Differentiation of gram-negative, nonfermentative bacteria isolated from biofilters on the basis of Fatty Acid composition, quinone system, and physiological reaction profiles.	Lipski A, Klatte S, Bendinger B, Altendorf K.	Appl Environ Microbiol	10.1128/aem.58.6.2053-2065.1992	1992
	Draft Genome Sequence of Agrobacterium radiobacter Strain MD22b, Isolated from a Grape Plant in Tajikistan.	Dzhuraeva M, Bobodzhanova K, Javier-Lopez R, Tediashvili M, Jaiani E, Birkeland NK.	Microbiol Resour Announc	10.1128/mra.01131-22	2023
Phylogeny	Strain ATCC 4720^T is the authentic type strain of Agrobacterium tumefaciens, which is not a later heterotypic synonym of Agrobacterium radiobacter.	Velazquez E, Flores-Felix JD, Sanchez-Juanes F, Igual JM, Peix A.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004443	2020
Metabolism	MALDI-TOF mass spectrometry is a fast and reliable platform for identification and ecological studies of species from family Rhizobiaceae.	Ferreira L, Sanchez-Juanes F, Garcia-Fraile P, Rivas R, Mateos PF, Martinez-Molina E, Gonzalez-Buitrago JM, Velazquez E.	PLoS One	10.1371/journal.pone.0020223	2011
Enzymology	Analysis of stable low-molecular-weight RNA profiles of members of the family Rhizobiaceae.	Velazquez E, Cruz-Sanchez JM, Mateos PF, Martinez-Molina E.	Appl Environ Microbiol	10.1128/aem.64.4.1555-1559.1998	1998
Enzymology	A new Agrobacterium strain isolated from aerial tumors on Ficus benjamina L.	Bouzar H, Chilton WS, Nesme X, Dessaux Y, Vaudequin V, Petit A, Jones JB, Hodge NC.	Appl Environ Microbiol	10.1128/aem.61.1.65-73.1995	1995
	Susceptibility of Agrobacterium tumefaciens Strains to Two Agrocin-Producing Agrobacterium Strains.	van Zyl FG, Strijdom BW, Staphorst JL.	Appl Environ Microbiol	10.1128/aem.52.2.234-238.1986	1986
Enzymology	Purification and characterization of seven bioactive compounds from the newly isolated Streptomyces cavourensis TN638 strain via solid-state fermentation.	Kaaniche F, Hamed A, Elleuch L, Chakchouk-Mtibaa A, Smaoui S, Karray-Rebai I, Koubaa I, Arcile G, Allouche N, Mellouli L	Microb Pathog	10.1016/j.micpath.2020.104106	2020
Pathogenicity	Chemical Composition and in vivo Efficacy of the Essential Oil of Mentha piperita L. in the Suppression of Crown Gall Disease on Tomato Plants.	Hsouna AB, Touj N, Hammami I, Dridi K, Al-Ayed AS, Hamdi N	J Oleo Sci	10.5650/jos.ess18261	2019
Phylogeny	Characterization of copper-resistant agrobacterium isolated from legume nodule in mining tailings.	Yu J, Fan L, Yang S, Tang M, Yang W, Li H, Wei G	Bull Environ Contam Toxicol	10.1007/s00128-008-9598-z	2008
Phylogeny	Endophytic occupation of root nodules and roots of Melilotus dentatus by Agrobacterium tumefaciens.	Wang LL, Wang ET, Liu J, Li Y, Chen WX	Microb Ecol	10.1007/s00248-006-9116-y	2006
Metabolism	Structural determination of the O-chain polysaccharide from Agrobacterium tumefaciens, strain DSM 30205.	De Castro C, De Castro O, Molinaro A, Parrilli M	Eur J Biochem	10.1046/j.1432-1033.2002.02955.x	2002
Phylogeny	Rhizobium pusense sp. nov., isolated from the rhizosphere of chickpea (Cicer arietinum L.).	Panday D, Schumann P, Das SK	Int J Syst Evol Microbiol	10.1099/ijs.0.028407-0	2010

References

#9202	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30205
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#36619	; Curators of the CIP;
#44253	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 725
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122121	Collection of Institut Pasteur ; Curators of the CIP; CIP 67.1
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Agrobacterium radiobacter (DSM 30205, ATCC 23308, CCM 1040)

Name and taxonomic classification

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Physiology and metabolism

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