Workshop and Q&A October 6th

Strain identifier

BacDive ID: 13580

Type strain: Yes

Species: Agrobacterium radiobacter

Culture col. no.: DSM 30147, ATCC 19358, IFO 13532, NBRC 13532, NCIB 9042, CCUG 3354, IAM 12048, EX 3.24.2 (L 624), JCM 20371, BCRC 10372, CECT 4112, CIP 104325, HAMBI 1814, ICMP 5785, KACC 10798, KCTC 22091, LMG 140, NCCB 27005, NCIMB 9042, NCPPB 3001

Strain history: IAM 12048 <-- ATCC 19358 <-- NCIB 9042 <-- Lab. Micorbiol., Delft; EX3.24.2.

NCBI tax ID(s): 1336745 (strain), 358 (species)

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Agrobacterium radiobacter DSM 30147 is an aerobe, mesophilic human pathogen that was isolated from Ditch water.

  1. aerobe
  2. human pathogen
  3. mesophilic
  4. 16S sequence
  5. Bacteria
  6. genome sequence
  • Availability in culture collections External linksarrow_down
  • [Ref.: #9167] Culture collection no. DSM 30147, ATCC 19358, IFO 13532, NBRC 13532, NCIB 9042, CCUG 3354, IAM 12048, EX 3.24.2 (L 624), JCM 20371, BCRC 10372, CECT 4112, CIP 104325, HAMBI 1814, ICMP 5785, KACC 10798, KCTC 22091, LMG 140, NCCB 27005, NCIMB 9042, NCPPB 3001
    [Ref.: #20218] Associated Passport(s) in StrainInfo 2057, 2053, 2061, 486704, 2063
    Literature: Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries.
    Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort Mesharrow to sort Topicarrow to sort Topic2arrow to sort
    Purification and characterization of 2,6-dihydroxybenzoate decarboxylase reversibly catalyzing nonoxidative decarboxylation. Yoshida T, Hayakawa Y, Matsui T, Nagasawa T Arch Microbiol 10.1007/s00203-004-0668-2 2004 Agrobacterium tumefaciens/*enzymology, Bicarbonates/metabolism, Carboxy-Lyases/chemistry/*isolation & purification/*metabolism, Coenzymes, Decarboxylation, Enzyme Stability, Hydrogen-Ion Concentration, Hydroxybenzoates/*metabolism, Kinetics, Molecular Weight, Potassium Compounds/metabolism, Protein Subunits/chemistry, Resorcinols/metabolism, Stereoisomerism, Substrate Specificity Enzymology Metabolism *
    Phylogenetic assignment and mechanism of action of a crop growth promoting Rhizobium radiobacter strain used as a biofertiliser on graminaceous crops in Russia. Humphry DR, Andrews M, Santos SR, James EK, Vinogradova LV, Perin L, Reis VM, Cummings SP Antonie Van Leeuwenhoek 10.1007/s10482-006-9100-z 2007 Agrobacterium tumefaciens/*classification/genetics/*physiology, Bacterial Proteins/genetics, Bacterial Typing Techniques, Crops, Agricultural/growth & development/*microbiology, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, DNA-Directed RNA Polymerases/genetics, Genes, rRNA, Gibberellins/biosynthesis, Hordeum/growth & development/microbiology, Indoleacetic Acids/metabolism, Molecular Sequence Data, Nitrogen Fixation/genetics, Nucleic Acid Hybridization, Oxidoreductases/genetics, Peptide Elongation Factor G/genetics, Phylogeny, Plant Diseases/microbiology, Plant Shoots/growth & development, Polymerase Chain Reaction, RNA, Ribosomal, 16S/genetics, Russia, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Solanum tuberosum/microbiology Phylogeny Genetics *
    Modeling growth and succinoglucan production by Agrobacterium radiobacter NCIB 9042 in batch cultures. Dussap CG, De Vita D, Pons A Biotechnol Bioeng 10.1002/bit.260380109 1991 Biotechnology *
    Rhizobium borbori sp. nov., aniline-degrading bacteria isolated from activated sludge. Zhang GX, Ren SZ, Xu MY, Zeng GQ, Luo HD, Chen JL, Tan ZY, Sun GP Int J Syst Evol Microbiol 10.1099/ijs.0.022228-0 2010 Aniline Compounds/*metabolism, Bacterial Typing Techniques, Cluster Analysis, DNA Fingerprinting, DNA Transposable Elements, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, DNA, Ribosomal Spacer/chemistry/genetics, Fatty Acids/analysis, Genotype, Glutamate-Ammonia Ligase, Molecular Sequence Data, Molecular Typing, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Rec A Recombinases, Rhizobium/*classification/genetics/isolation & purification/*metabolism, Sequence Analysis, DNA, Sewage/*microbiology Phylogeny Genetics *
    Rhizobium rosettiformans sp. nov., isolated from a hexachlorocyclohexane dump site, and reclassification of Blastobacter aggregatus Hirsch and Muller 1986 as Rhizobium aggregatum comb. nov. Kaur J, Verma M, Lal R Int J Syst Evol Microbiol 10.1099/ijs.0.017491-0 2010 Bradyrhizobiaceae/*classification/genetics/*isolation & purification/metabolism, DNA, Bacterial/genetics, Fatty Acids/metabolism, Hexachlorocyclohexane/*metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhizobium/*classification/genetics/*isolation & purification/metabolism, Water Pollutants, Chemical/*metabolism Phylogeny Metabolism *
    Rhizobium pusense sp. nov., isolated from the rhizosphere of chickpea (Cicer arietinum L.). Panday D, Schumann P, Das SK Int J Syst Evol Microbiol 10.1099/ijs.0.028407-0 2010 Base Composition, Cicer/*microbiology, DNA, Bacterial/genetics, Fatty Acids/metabolism, India, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhizobium/*classification/genetics/*isolation & purification/metabolism, *Rhizosphere, *Soil Microbiology Phylogeny Metabolism *
    Rhizobium nepotum sp. nov. isolated from tumors on different plant species. Pulawska J, Willems A, De Meyer SE, Sule S Syst Appl Microbiol 10.1016/j.syapm.2012.03.001 2012 Bacterial Proteins/genetics, Bacterial Typing Techniques, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Hungary, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, Poland, RNA, Ribosomal, 16S/genetics, Rhizobium/*classification/genetics/*isolation & purification, Root Nodules, Plant/*microbiology, Sequence Analysis, DNA Phylogeny Genetics *
    Genomic analysis of Agrobacterium radiobacter DSM 30147(T) and emended description of A. radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993. Zhang L, Li X, Zhang F, Wang G Stand Genomic Sci 10.4056/sigs.4688352 2014 *
    Agrobacterium deltaense sp. nov., an endophytic bacteria isolated from nodule of Sesbania cannabina. Yan J, Li Y, Han XZ, Chen WF, Zou WX, Xie Z, Li M Arch Microbiol 10.1007/s00203-017-1367-0 2017 *Agrobacterium/classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition/genetics, China, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, Essential/genetics, Genome, Bacterial/genetics, Phylogeny, RNA, Ribosomal, 16S/genetics, Root Nodules, Plant/*microbiology, Sequence Analysis, DNA, Sesbania/*microbiology Phylogeny Genetics *
    Agrobacterium salinitolerans sp. nov., a saline-alkaline-tolerant bacterium isolated from root nodule of Sesbania cannabina. Yan J, Li Y, Yan H, Chen WF, Zhang X, Wang ET, Han XZ, Xie ZH Int J Syst Evol Microbiol 10.1099/ijsem.0.001885 2017 Agrobacterium/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, *Phylogeny, RNA, Ribosomal, 16S/genetics, Root Nodules, Plant/*microbiology, Sequence Analysis, DNA, Sesbania/*microbiology Phylogeny Transcriptome *

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