Name: Tistrella mobilis CIP 108080
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 135528

Type strain:

Species: Tistrella mobilis

Culture col. no.: CIP 108080, IAM 14872, JCM 21370, CGMCC 1.7686, NBRC 102134, TISTR 1108

Strain history: CIP <- 2003, IAM <- Vullapa Arunpairojana: strain TISTR 1108

NCBI tax ID(s): 171437 (species)

SI-ID 126083

IAM 14872, TISTR 1108, CIP 108080, NBRC 102134, JCM 21370

Section

Tistrella mobilis CIP 108080 is a mesophilic, Gram-negative, motile bacterium of the family Geminicoccaceae.

Gram-negative
motile
rod-shaped
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Geminicoccaceae*
	Genus	*Tistrella*
	Species	**Tistrella mobilis**
	Full Scientific Name (LPSN)	Tistrella mobilis Shi et al. 2003

Information on morphological and physiological properties Morphology

[Ref.: #34675]	Gram stain	negative

[Ref.: #34675]	Cell shape	rod-shaped

[Ref.: #34675]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #34675]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #34675]

Culture medium growth

[Ref.: #34675]

Culture medium composition

expand / minimize

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Culture medium

CIP Medium 328

[Ref.: #34675]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #34675]

Culture medium

CIP Medium 72

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #34675]		growth	30 °C
[Ref.: #34675]		growth	25-37 °C
[Ref.: #34675]	no	growth	5 °C
[Ref.: #34675]	no	growth	10 °C
[Ref.: #34675]	no	growth	41 °C
[Ref.: #67770]		growth	27 °C

[Ref.: #34675]	Temperature range	mesophilic
[Ref.: #34675]	Temperature range	psychrophilic
[Ref.: #34675]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Salt	Tested relation		Salt conc.
[Ref.: #34675]	NaCl		growth	0-6	%
[Ref.: #34675]	NaCl	no	growth	8	%
[Ref.: #34675]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #34675]	citrate ChEBI	-	carbon source
[Ref.: #34675]	esculin ChEBI	-	hydrolysis
[Ref.: #34675]	nitrate ChEBI	-	reduction
[Ref.: #34675]	nitrate ChEBI	-	respiration
[Ref.: #34675]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #34675]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #34675]		indole ChEBI	yes
[Ref.: #67770]		polyhydroxyalkanoate ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #34675]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #34675]	amylase	-
[Ref.: #34675]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #34675]	caseinase	-	3.4.21.50
[Ref.: #34675]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #34675]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #34675]	gelatinase	-
[Ref.: #34675]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #34675]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #34675]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #34675]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #34675]	oxidase	+
[Ref.: #34675]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #34675]	tryptophan deaminase	-
[Ref.: #34675]	tween esterase	-
[Ref.: #34675]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #34675]	10868	-	+	+	+	-	+	-	+	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Wastewater
[Ref.: #67770]	Country	Thailand
[Ref.: #67770]	Country ISO 3 Code	THA
[Ref.: #67770]	Continent	Asia

[Ref.: #34675]	Sample type/isolated from	Environment, Wastewater
[Ref.: #34675]	Country	Thailand
[Ref.: #34675]	Country ISO 3 Code	THA
[Ref.: #34675]	Continent	Asia

[Ref.: #34675]	Country	Thailand
[Ref.: #34675]	Country ISO 3 Code	THA
[Ref.: #34675]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB071665 (>99% sequence identity) for Tistrella mobilis subclade from Microbeatlas

Aquatic Samples	4475
Soil Samples	866
Animal Samples	944
Plant Samples	153
Total Samples	6438

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #34675]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Tistrella mobilis gene for 16S ribosomal RNA, partial sequence	AB071665	1453	ENA	171437 tax ID

[Ref.: #67770]

GC-content

67.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #34675]

Culture collection no.

CIP 108080, IAM 14872, JCM 21370, CGMCC 1.7686, NBRC 102134, TISTR 1108

[Ref.: #92874]

SI-ID 126083

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	[Predominant strains of polycyclic aromatic hydrocarbon-degrading consortia from deep sea of the Middle Atlantic Ridge].	Cui Z, Shao Z	Wei Sheng Wu Xue Bao		2009	*
Phylogeny	Tistrella mobilis gen nov, sp nov, a novel polyhydroxyalkanoate-producing bacterium belonging to alpha-Proteobacteria.	Shi BH, Arunpairojana V, Palakawong S, Yokota A	J Gen Appl Microbiol	10.2323/jgam.48.335	2002	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#34675 Collection of Institut Pasteur ; Curators of the CIP; CIP 108080
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#92874

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID126083.1 )

* These data were automatically processed and therefore are not curated

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