Name: Pyrodictium brockii S1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13525

Type strain:

Species: Pyrodictium brockii

Strain Designation: S1

Culture col. no.: DSM 2708, JCM 9392, NBRC 100437

Strain history: DSM 2708 <-- K. O. Stetter S1.

NCBI tax ID(s): 35616 (species)

SI-ID 47659

DSM 2708, JCM 9392, NBRC 100437

Section

Pyrodictium brockii S1 is an anaerobe, hyperthermophilic archaeon that was isolated from submarine solfataric field.

anaerobe
hyperthermophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Thermoproteota*
	Class	*Thermoprotei*
	Order	*Desulfurococcales*
	Family	*Pyrodictiaceae*
	Genus	*Pyrodictium*
	Species	**Pyrodictium brockii**
	Full Scientific Name (LPSN)	Pyrodictium brockii Stetter et al. 1984

Information on culture and growth conditions Culture and growth conditions

[Ref.: #1208]

Culture medium

PYRODICTIUM MEDIUM (DSMZ Medium 283)

[Ref.: #1208]

Culture medium growth

[Ref.: #1208]

Culture medium link

Medium recipe at MediaDive

[Ref.: #1208]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1208]			growth	97 °C
[Ref.: #67770]			growth	95 °C

[Ref.: #1208]	Temperature range	hyperthermophilic
[Ref.: #67770]	Temperature range	hyperthermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #1208]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1208]	Sample type/isolated from	submarine solfataric field
[Ref.: #1208]	Geographic location (country and/or sea, region)	Vulcano island, Porto di Levante
[Ref.: #1208]	Country	Italy
[Ref.: #1208]	Country ISO 3 Code	ITA
[Ref.: #1208]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Submarine solfataric field off Vulcano
[Ref.: #67770]	Country	Italy
[Ref.: #67770]	Country ISO 3 Code	ITA
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Condition	#Sulfuric	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1208]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1208]	Pyrodictium brockii 16S ribosomal RNA, partial sequence; 16S-23S intergenic ribosomal RNA spacer, complete sequence; and 23S ribosomal RNA genes, partial sequence	L36461	406	ENA	35616 tax ID
[Ref.: #20218]	Pyrodictium brockii strain NBRC 100437 16S ribosomal RNA gene, partial sequence	KC139250	1334	ENA	35616 tax ID	*

[Ref.: #1208]	GC-content	62.0 mol%
[Ref.: #67770]	GC-content	51.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	62 mol%
[Ref.: #67770]	GC-content	51.6 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #1208]

Culture collection no.

DSM 2708, JCM 9392, NBRC 100437

[Ref.: #82716]

SI-ID 47659

References

#1208

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2708

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#82716

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID47659.1 )

* These data were automatically processed and therefore are not curated

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