[Ref.: #7763] |
Sample type/isolated from |
salt lake |
[Ref.: #7763] |
Geographic location (country and/or sea, region) |
East Sea, Hwajinpo beach |
[Ref.: #7763] |
Country |
Republic of Korea |
[Ref.: #7763] |
Country ISO 3 Code |
KOR |
[Ref.: #7763] |
Continent |
Asia |
|
[Ref.: #67770] |
Sample type/isolated from |
Salt lake near Hwajinpo beach |
[Ref.: #67770] |
Country |
Republic of Korea |
[Ref.: #67770] |
Country ISO 3 Code |
KOR |
[Ref.: #67770] |
Continent |
Asia |
|
[Ref.: #122384] |
Sample type/isolated from |
Environment, Salt lake |
[Ref.: #122384] |
Geographic location (country and/or sea, region) |
Near Hwajinpo beach on the East Sea |
[Ref.: #122384] |
Country |
Republic of Korea |
[Ref.: #122384] |
Country ISO 3 Code |
KOR |
[Ref.: #122384] |
Continent |
Asia |
|
[Ref.: #22988] |
Enrichment culture temperature |
30.0 ̊C |
* marker position based on {}
|
|
Isolation sources categories |
#Environmental |
#Aquatic |
#Lake (large) |
#Condition |
#Saline |
- |
|
|
-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #7763] |
Halobacillus salinus strain HSL-3 16S ribosomal RNA gene, partial sequence |
AF500003 |
1522 |
|
192814 tax ID |
[Ref.: #20218] |
Halobacillus salinus gene for 16S ribosomal RNA, 23S ribosomal RNA, tRNA-Ileu, tRNA-Ala, partial and complete sequence, clone: 850 |
AB243776 |
644 |
|
192814 tax ID |
* |
[Ref.: #20218] |
Halobacillus salinus gene for 16S ribosomal RNA, ITS1, 23S ribosomal RNA, partial and complete sequence, clone: 700 |
AB243777 |
448 |
|
192814 tax ID |
* |
[Ref.: #20218] |
Halobacillus salinus gene for 16S ribosomal RNA, ITS1, 23S ribosomal RNA, partial and complete sequence, clone: 550 |
AB243778 |
566 |
|
192814 tax ID |
* |
[Ref.: #20218] |
Halobacillus salinus gene for 16S ribosomal RNA, ITS1, 23S ribosomal RNA, partial and complete sequence, clone: 450 |
AB243779 |
448 |
|
192814 tax ID |
* |
|
|
Genome sequence information: |
|
|
Sequence accession description |
Seq. accession number |
Assembly level |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #66792] |
Halobacillus salinus HSL-3 |
GCA_004684905 |
scaffold |
|
192814 tax ID |
* |
[Ref.: #66792] |
Halobacillus salinus HSL-3 |
2894530364 |
draft |
|
192814 tax ID |
* |
|
|
-
Availability in culture collections External links
[Ref.: #7763] |
Culture collection no. |
DSM 18897, CIP 108052, JCM 11546, KCCM 41590, CGMCC 1.3705, KCTC 3842 |
[Ref.: #71001] |
SI-ID 100669
|
* |
[Ref.: #71002] |
SI-ID 312363
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Halobacillus fulvus sp. nov., a moderately halophilic bacterium isolated from shrimp paste (Ka-pi) in Thailand. |
Booncharoen A, Visessanguan W, Kuncharoen N, Yiamsombut S, Santiyanont P, Mhuantong W, Rojsitthisak P, Tanasupawat S |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.005054 |
2021 |
* |
Phylogeny |
Halobacillus andaensis sp. nov., a moderately halophilic bacterium isolated from saline and alkaline soil. |
Wang K, Zhang L, Yang Y, Pan Y, Meng L, Liu H, Hong S, Huang H, Jiang J |
Int J Syst Evol Microbiol |
10.1099/ijs.0.000198 |
2015 |
* |
Phylogeny |
Halobacillus salinus sp. nov., isolated from a salt lake on the coast of the East Sea in Korea. |
Yoon JH, Kang KH, Park YH |
Int J Syst Evol Microbiol |
10.1099/ijs.0.02421-0 |
2003 |
* |
|
- References
-
#7763 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 18897
|
-
-
-
-
#33196 |
; Curators of the CIP;
|
-
-
#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
|
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
-
#71001 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID100669.1 )
|
-
#71002 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID312363.1 )
|
-
#122384 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 108052
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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