Name: Actinomycetospora iriomotensis IR73-Li102
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13507

Type strain:

Species: Actinomycetospora iriomotensis

Strain Designation: IR73-Li102

Culture col. no.: DSM 45811, KCTC 19783, NBRC 106365

Strain history: <- T Tamura, NBRC <- M Hayakawa, Univ. Yamanashi

NCBI tax ID(s): 878213 (species)

SI-ID 399084

DSM 45811

Section

Actinomycetospora iriomotensis IR73-Li102 is an aerobe, Gram-positive bacterium that was isolated from crustose lichen sample.

Gram-positive
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinomycetospora*
	Species	**Actinomycetospora iriomotensis**
	Full Scientific Name (LPSN)	Actinomycetospora iriomotensis Yamamura et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18277]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #18277]

Culture medium growth

[Ref.: #18277]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18277]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #18277]			growth	28 °C
[Ref.: #67771]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18277]	Sample type/isolated from	crustose lichen sample
[Ref.: #18277]	Geographic location (country and/or sea, region)	Hokkaido, Rishiri
[Ref.: #18277]	Country	Japan
[Ref.: #18277]	Country ISO 3 Code	JPN
[Ref.: #18277]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From lichen
[Ref.: #67771]	Geographic location (country and/or sea, region)	Rishiri, Hokkaido
[Ref.: #67771]	Country	Japan
[Ref.: #67771]	Country ISO 3 Code	JPN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host

#Other

#Lichen

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB581531 (>99% sequence identity) for Actinomycetospora iriomotensis from Microbeatlas

Aquatic Samples	51
Soil Samples	92
Animal Samples	33
Plant Samples	14
Total Samples	190

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18277]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18277]	Actinomycetospora iriomotensis gene for 16S ribosomal RNA, partial sequence	AB581531	1428	GenBank ENA	878213 tax ID

[Ref.: #18277]

GC-content

74 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #18277]

Culture collection no.

DSM 45811, KCTC 19783, NBRC 106365

[Ref.: #82699]

SI-ID 399084

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomycetospora atypica sp. nov., a novel soil actinomycete and emended description of the genus Actinomycetospora.	Zhang Y, Liu C, Zhang J, Shen Y, Li C, He H, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-014-0143-2	2014	*
Phylogeny	Actinomycetospora iriomotensis sp. nov., a novel actinomycete isolated from a lichen sample.	Yamamura H, Ashizawa H, Nakagawa Y, Hamada M, Ishida Y, Otoguro M, Tamura T, Hayakawa M	J Antibiot (Tokyo)	10.1038/ja.2011.15	2011	*

References

#18277

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45811

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#82699

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399084.1 )

* These data were automatically processed and therefore are not curated

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