Actinomycetospora chlora (DSM 45770, KACC 14252, NBRC 105900)

Name: Actinomycetospora chlora (DSM 45770, KACC 14252, NBRC 105900)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13501

Type strain

Strain Designation TT07I-57

Culture col. no. DSM 45770 KACC 14252 NBRC 105900 TT07I-57 JCM 17979

NCBI tax ID(s) 663608

Special Collections DSMZ JCM

History DSMZ <- S.-W. Kwon, KACC; KACC 14252 <- T. Tamura; TT07I-57 JCM <-- KACC 14252 <-- NBRC 105900 <-- T. Tamura TT071-57.

Links

Actinomycetospora chlora TT07I-57 is a bacterium that was isolated from rice field soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 407688

NBRC 105900,JCM 17979,DSM 45770

@ref 20215

Last LPSN update 2026-05-29 08:28:03

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Actinomycetospora

Species Actinomycetospora chlora

Full scientific name Actinomycetospora chlora Tamura et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99.532

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18184	ISP2 MEDIUM (DSMZ Medium 987)		Medium recipe at MediaDive	Name: ISP 2 MEDIUM (DSMZ Medium 987) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Dextrose 4.0 g/l Yeast extract 4.0 g/l Distilled water
18184	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18184	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.936

Observation

67770

Observationquinones: MK-8(H₄)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
18184	rice field soil	Iriomote Island, Okinawa	Japan	JPN	Asia
67770	Paddy soil	Iriomote Island, Okinawa Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB514519 (>99% sequence identity) for Actinomycetospora chlora from Microbeatlas

Aquatic Samples	77
Soil Samples	545
Animal Samples	110
Plant Samples	88
Total Samples	820

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18184	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954213v1 assembly for Actinomycetospora chlora JCM 17979	scaffold	GCA_039542135	663608	26.54

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
18184	Actinomycetospora chlora gene for 16S rRNA, partial sequence, strain: TT07I-57	AB514519	1487		663608

GC content

@ref	GC-content (mol%)	Method
18184	73
67770	73	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3954213v1 assembly for Actinomycetospora chlora JCM 17979
NCBI: GCA_039542135

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	99.53	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.94	no
125439	motility	BacteriaNetⓘ	no	83.76	no
125439	spore_formation	BacteriaNetⓘ	yes	48.89	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomycetospora rhizophila sp. nov., an actinomycete isolated from rhizosphere soil of a peace lily (Spathi phyllum Kochii).	He H, Zhang Y, Ma Z, Li C, Liu C, Zhou Y, Li L, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijs.0.000131	2015
Phylogeny	Description of Actinomycetospora chibensis sp. nov., Actinomycetospora chlora sp. nov., Actinomycetospora cinnamomea sp. nov., Actinomycetospora corticicola sp. nov., Actinomycetospora lutea sp. nov., Actinomycetospora straminea sp. nov. and Actinomycetospora succinea sp. nov. and emended description of the genus Actinomycetospora.	Tamura T, Ishida Y, Hamada M, Otoguro M, Yamamura H, Hayakawa M, Suzuki KI	Int J Syst Evol Microbiol	10.1099/ijs.0.024166-0	2010

References

#18184	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45770
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinomycetospora chlora (DSM 45770, KACC 14252, NBRC 105900)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039542135

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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