Chryseobacterium aquaticum subsp. greenlandense (CIP 110007, NRRL B-59357)

Name: Chryseobacterium aquaticum subsp. greenlandense (CIP 110007, NRRL B-59357)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134711

Type strain

Culture col. no. CIP 110007 NRRL B-59357

NCBI tax ID(s) 345663

Special Collections CIP

Links

Chryseobacterium aquaticum subsp. greenlandense CIP 110007 is an obligate aerobe, mesophilic, Gram-negative prokaryote of the family Weeksellaceae.

Gram-negative rod-shaped obligate aerobe mesophilic genome sequence

Name and taxonomic classification

SI-ID 370162

CIP 110007,NRRL B-59357

@ref 20215

Last LPSN update 2025-12-16 10:02:07

Domain Pseudomonadati

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium aquaticum subsp. greenlandense

Full scientific name Chryseobacterium aquaticum subsp. greenlandense (Loveland-Curtze et al. 2010) García-López et al. 2020

Synonyms (1)

Chryseobacterium greenlandense

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
33344	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
33344	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
33344	CIP Medium 72			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
33344	positive	growth	25	mesophilic

Physiology and metabolism

Oxygen tolerance

33344

Oxygen toleranceobligate aerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
33344	17632 ChEBI	nitrate	-	reduction
33344	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
33344	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
33344	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
33344	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
33344	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
33344	-	+	-	+	-	+	+	+	+	-	+	+	-	-	-	+	-	+	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
33344		Greenland ice sheet	Greenland	GRL	North America
33344	Environment, Greenland, GIPS2 ice core	Ice Sheet	Greenland	GRL	North America	2004

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
33344	1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
124043	ASM150732v1 assembly for Chryseobacterium aquaticum subsp. greenlandense UMB34	contig	GCA_001507325	2728368984	345663	74.88

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.	Garcia-Lopez M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Goker M.	Front Microbiol	10.3389/fmicb.2019.02083	2019
Phylogeny	Chryseobacterium glaciei sp. nov., isolated from the surface of a glacier in the Indian trans-Himalayas.	Pal M, Kumari M, Kiran S, Salwan R, Mayilraj S, Chhibber S, Gulati A.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002600	2018
Phylogeny	Novel ultramicrobacterial isolates from a deep Greenland ice core represent a proposed new species, Chryseobacterium greenlandense sp. nov.	Loveland-Curtze J, Miteva V, Brenchley J.	Extremophiles	10.1007/s00792-009-0287-6	2010

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#33344	Collection of Institut Pasteur ; Curators of the CIP; CIP 110007
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chryseobacterium aquaticum subsp. greenlandense (CIP 110007, NRRL B-59357)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001507325

Genome-based predictions

Literature

Literature

References

BacDive

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