Name: Shewanella decolorationis CIP 108688
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134698

Type strain:

Species: Shewanella decolorationis

Culture col. no.: CIP 108688, IAM 15094, CCTCC M 203093, JCM 21555, KCTC 23987, NBRC 103170

Strain history: IAM 15094 <-- M. Xu S12.

NCBI tax ID(s): 256839 (species)

Section

Shewanella decolorationis CIP 108688 is a mesophilic bacterium of the family Shewanellaceae.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Shewanellaceae*
	Genus	*Shewanella*
	Species	**Shewanella decolorationis**
	Full Scientific Name (PNU)	Shewanella decolorationis Xu et al. 2005

Information on culture and growth conditions Culture and growth conditions

[Ref.: #33262]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33262]

Culture medium growth

[Ref.: #33262]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #33262]			growth	25 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #33262]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7, Q-8, Q-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Activated sludge of a textile-printing wastewater treatment plant in Guangzhou
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #33262]	Geographic location (country and/or sea, region)	Guangzhou
[Ref.: #33262]	Country	China
[Ref.: #33262]	Country ISO 3 Code	CHN
[Ref.: #33262]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AJ609571 (>99% sequence identity) for Shewanella decolorationis from Microbeatlas

Aquatic Samples	83
Soil Samples	8
Animal Samples	185
Plant Samples	1
Total Samples	277

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Shewanella decolorationis partial 16S rRNA gene, type strain CCTCC M 203093T	AJ609571	1448	ENA	1353536 tax ID

[Ref.: #67770]

GC-content

49.3 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #33262]

Culture collection no.

CIP 108688, IAM 15094, CCTCC M 203093, JCM 21555, KCTC 23987, NBRC 103170

[Ref.: #20218]

Associated Passport(s) in StrainInfo

841028, 382830, 374029

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Shewanella decolorationis sp. nov., a dye-decolorizing bacterium isolated from activated sludge of a waste-water treatment plant.	Xu M, Guo J, Cen Y, Zhong X, Cao W, Sun G	Int J Syst Evol Microbiol	10.1099/ijs.0.63157-0	2005	*
Phylogeny	Shewanella seohaensis sp. nov., isolated from a tidal flat sediment.	Yoon JH, Park S, Jung YT, Lee JS	Antonie Van Leeuwenhoek	10.1007/s10482-012-9722-2	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33262 Collection of Institut Pasteur ; Curators of the CIP; CIP 108688
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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