Hathewaya histolytica (CIP 60.16, JCM 11014, 114 C)

Name: Hathewaya histolytica (CIP 60.16, JCM 11014, 114 C)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134377

Type strain

Strain Designation 114 C

Culture col. no. CIP 60.16 JCM 11014 114 C

NCBI tax ID(s) 1498

Special Collections JCM CIP

History CIP <- 1960, A.R. Prévot, Inst. Pasteur, Paris, France: strain 114 C JCM <-- CIP 60.16 <-- A. R. Prévot 114C. CIP <- 1960, A.R. Prévot, Inst. Pasteur, Paris, France, Clostridium histolyticum: strain 114 C

Links

Hathewaya histolytica 114 C is an anaerobe, Gram-positive, motile bacterium of the family Clostridiaceae.

Gram-positive motile rod-shaped anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 67906

JCM 11014,CIP 60.16

@ref 20215

Last LPSN update 2026-05-29 08:38:18

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Hathewaya

Species Hathewaya histolytica

Full scientific name Hathewaya histolytica (Weinberg and Séguin 1916) Lawson and Rainey 2016

Synonyms (2)

Clostridium histolyticum
"Bacillus histolyticus"

BacDive ID	Other strains from **Hathewaya histolytica** (5)	Type strain
2601	H. histolytica Weinberg, LRA 050 07 85, DSM 2158, ATCC 19401, ... (type strain)
2599	H. histolytica DSM 627
2600	H. histolytica DSM 1126
138873	H. histolytica chevaux, CIP 60.34, JCM 11013
141392	H. histolytica CCUG 1390

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
32663	positive	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
32663	MEDIUM 20 - for Anaerobic bacteria		Agar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)
32663	CIP Medium 20			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
32663	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

32663

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32663	17632 ChEBI	nitrate	+	reduction
32663	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
32663	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
32663	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
32663	oxidase	-
68382	trypsin	+	3.4.21.4	from API zym
32663	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	lipoate biosynthesis	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	vitamin B1 metabolism	92.31	12 of 13
66794	chorismate metabolism	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	vitamin B12 metabolism	85.29	29 of 34
66794	phenylalanine metabolism	84.62	11 of 13
66794	peptidoglycan biosynthesis	80	12 of 15
66794	photosynthesis	78.57	11 of 14
66794	NAD metabolism	77.78	14 of 18
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	pyrimidine metabolism	75.56	34 of 45
66794	ppGpp biosynthesis	75	3 of 4
66794	biotin biosynthesis	75	3 of 4
66794	lactate fermentation	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	purine metabolism	74.47	70 of 94
66794	flavin biosynthesis	73.33	11 of 15
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	heme metabolism	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	alanine metabolism	68.97	20 of 29
66794	glutamate and glutamine metabolism	67.86	19 of 28
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	octane oxidation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	methionine metabolism	61.54	16 of 26
66794	non-pathway related	60.53	23 of 38
66794	methylglyoxal degradation	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	cellulose degradation	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	oxidative phosphorylation	57.14	52 of 91
66794	propanol degradation	57.14	4 of 7
66794	degradation of sugar alcohols	56.25	9 of 16
66794	tryptophan metabolism	52.63	20 of 38
66794	ketogluconate metabolism	50	4 of 8
66794	threonine metabolism	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	isoprenoid biosynthesis	50	13 of 26
66794	phenylmercury acetate degradation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	adipate degradation	50	1 of 2
66794	tetrahydrofolate metabolism	50	7 of 14
66794	glycine metabolism	50	5 of 10
66794	toluene degradation	50	2 of 4
66794	suberin monomers biosynthesis	50	1 of 2
66794	isoleucine metabolism	50	4 of 8
66794	proline metabolism	45.45	5 of 11
66794	lysine metabolism	45.24	19 of 42
66794	lipid metabolism	45.16	14 of 31
66794	nitrate assimilation	44.44	4 of 9
66794	cysteine metabolism	44.44	8 of 18
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	ubiquinone biosynthesis	42.86	3 of 7
66794	tyrosine metabolism	42.86	6 of 14
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	glycogen metabolism	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	histidine metabolism	37.93	11 of 29
66794	arginine metabolism	37.5	9 of 24
66794	d-xylose degradation	36.36	4 of 11
66794	pentose phosphate pathway	36.36	4 of 11
66794	citric acid cycle	35.71	5 of 14
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	valine metabolism	33.33	3 of 9
66794	degradation of hexoses	33.33	6 of 18
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	IAA biosynthesis	33.33	1 of 3
66794	degradation of pentoses	32.14	9 of 28
66794	ascorbate metabolism	31.82	7 of 22
66794	urea cycle	30.77	4 of 13
66794	leucine metabolism	30.77	4 of 13
66794	sulfate reduction	30.77	4 of 13
66794	myo-inositol biosynthesis	30	3 of 10
66794	propionate fermentation	30	3 of 10
66794	glutathione metabolism	28.57	4 of 14
66794	metabolism of disaccharids	27.27	3 of 11
66794	vitamin B6 metabolism	27.27	3 of 11
66794	polyamine pathway	26.09	6 of 23
66794	glycogen biosynthesis	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	CMP-KDO biosynthesis	25	1 of 4
66794	lipid A biosynthesis	22.22	2 of 9

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
32663	-	-	-	-	-	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent	Isolation date
32663			France	FRA	Europe
32663	Human, Appendix	Homo sapiens	France	FRA	Europe	1959

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
32663	2	Risk group (French classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Hathewaya histolytica JCM 11014 gene for 16S ribosomal RNA, partial sequence	LC480787	1453		1498

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#32663	Collection of Institut Pasteur ; Curators of the CIP; CIP 60.16
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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