Marinomonas communis (KCTC 22118, JCM 14948, J63)

Name: Marinomonas communis (KCTC 22118, JCM 14948, J63)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134351

Type strain

Strain Designation J63

Culture col. no. KCTC 22118 JCM 14948 J63 LMG 25279

NCBI tax ID(s) 28254

Special Collections JCM KCTC Literature strains

Links

Marinomonas communis J63 is an aerobe, Gram-negative, motile prokaryote that was isolated from black sand.

Gram-negative motile rod-shaped aerobe 16S sequence

Name and taxonomic classification

SI-ID 364759

LMG 25279,KCTC 22118,JCM 14948

@ref 20215

Last LPSN update 2025-12-16 10:02:02

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Oceanospirillaceae

Genus Marinomonas

Species Marinomonas communis

Full scientific name Marinomonas communis (Baumann et al. 1972) van Landschoot and De Ley 1984

Synonyms (3)

Alteromonas communis
Oceanospirillum commune
Marinomonas basaltis

BacDive ID	Other strains from **Marinomonas communis** (1)	Type strain
11268	M. communis Baumann 8, CECT 5003, IAM 12914, JCM 20766, ... (type strain)

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
32580	negative	1-2.5 µm	0.5-0.6 µm	rod-shaped
67771	negative

Pigmentation

32580

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
32580	positive	growth	10-45
32580	positive	optimum	30	mesophilic
67770	positive	growth	30	mesophilic
67771	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
32580	positive	optimum	7
32580	positive	growth	05-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
32580	aerobe
67771	aerobe

Spore formation

32580

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32580	NaCl	positive	growth	01-07 %
32580	NaCl	positive	optimum	01-07 %

Observation

32580

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32580	16449 ChEBI	alanine	+	carbon source
32580	40585 ChEBI	alpha-cyclodextrin	+	carbon source
32580	22599 ChEBI	arabinose	+	carbon source
32580	22653 ChEBI	asparagine	+	carbon source
32580	35391 ChEBI	aspartate	+	carbon source
32580	16947 ChEBI	citrate	+	carbon source
32580	28757 ChEBI	fructose	+	carbon source
32580	28260 ChEBI	galactose	+	carbon source
32580	24265 ChEBI	gluconate	+	carbon source
32580	17234 ChEBI	glucose	+	carbon source
32580	29987 ChEBI	glutamate	+	carbon source
32580	17754 ChEBI	glycerol	+	carbon source
32580	24996 ChEBI	lactate	+	carbon source
32580	51850 ChEBI	methyl pyruvate	+	carbon source
32580	506227 ChEBI	N-acetylglucosamine	+	carbon source
32580	26271 ChEBI	proline	+	carbon source
32580	15963 ChEBI	ribitol	+	carbon source
32580	30031 ChEBI	succinate	+	carbon source
32580	17992 ChEBI	sucrose	+	carbon source
32580	26986 ChEBI	threonine	+	carbon source
32580	27082 ChEBI	trehalose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
32580	alkaline phosphatase	+	3.1.3.1
32580	alpha-galactosidase	+	3.2.1.22
32580	catalase	+	1.11.1.6
32580	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Sandy

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
32580	black sand
67770	Black sand	Soesoggak, Jeju island	Republic of Korea	KOR	Asia
67771	From black sand in Soesoggak	Jeju island	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence EU143359 (>99% sequence identity) for Marinomonas from Microbeatlas

Aquatic Samples	45
Soil Samples
Animal Samples	2
Plant Samples	1
Total Samples	48

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
32580	Marinomonas basaltis strain J63 16S ribosomal RNA gene, partial sequence	EU143359	1402		28254
124043	Marinomonas basaltis strain LMG 25279 16S ribosomal RNA gene, partial sequence.	GU929941	1501		28254

GC content

@ref	GC-content (mol%)	Method
32580	48.8
67770	46.3	high performance liquid chromatography (HPLC)
67770	48.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinomonas basaltis sp. nov., a marine bacterium isolated from black sand.	Chang HW, Roh SW, Kim KH, Nam YD, Yoon JH, Oh HM, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.65724-0	2008

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28795	IJSEM 2743 2008 ( DOI 10.1099/ijs.0.65724-0 , PubMed 19060051 )
#32580	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28795
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Marinomonas communis (KCTC 22118, JCM 14948, J63)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

Help

Social Media