Name: Roseateles terrae CECT 7247
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134277

Type strain:

Species: Roseateles terrae

Culture col. no.: CECT 7247, CCUG 52222

NCBI tax ID(s): 431060 (species)

SI-ID 303366

CCUG 52222, CECT 7247

Section

Roseateles terrae CECT 7247 is an aerobe, Gram-negative, motile bacterium that was isolated from freshwater .

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Roseateles*
	Species	**Roseateles terrae**
	Full Scientific Name (LPSN)	Roseateles terrae Gomila et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32233]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.989

[Ref.: #32233]	Cell length	2 µm

[Ref.: #32233]	Cell width	0.5 µm

[Ref.: #32233]	Cell shape	rod-shaped

[Ref.: #32233]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %97.905

[Ref.: #32233]

Pigment production

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #32233]			growth	10-37 °C
[Ref.: #59473]			growth	37 °C

[Ref.: #59473]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32233]	Oxygen tolerance	aerobe
[Ref.: #59473]	Oxygen tolerance	aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.974

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32233]	arabinose ChEBI	+	carbon source
[Ref.: #32233]	decanoate ChEBI	+	carbon source
[Ref.: #32233]	esculin ChEBI	+	hydrolysis
[Ref.: #32233]	gluconate ChEBI	+	carbon source
[Ref.: #32233]	glucose ChEBI	+	carbon source
[Ref.: #32233]	maltose ChEBI	+	carbon source
[Ref.: #32233]	mannitol ChEBI	+	carbon source
[Ref.: #32233]	mannose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #32233]	catalase	+	1.11.1.6
[Ref.: #32233]	cytochrome oxidase	+	1.9.3.1
[Ref.: #32233]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #32233]	Sample type/isolated from	freshwater (river, lake, pond)

[Ref.: #59473]	Sample type/isolated from	Soil
[Ref.: #59473]	Geographic location (country and/or sea, region)	Mitsukaido
[Ref.: #59473]	Country	Japan
[Ref.: #59473]	Country ISO 3 Code	JPN
[Ref.: #59473]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM501445 (>99% sequence identity) for Roseateles from Microbeatlas

Aquatic Samples	489
Soil Samples	360
Animal Samples	216
Plant Samples	315
Total Samples	1380

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #32233]	Roseateles terrae partial 16S rRNA gene, type strain CCUG 52222T	AM501445	1388	GenBank	431060 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Roseateles terrae CECT 7247	GCA_014192155	scaffold	GenBank	431060 tax ID	*
[Ref.: #66792]	Roseateles terrae CCUG 52222	GCA_002205615	contig	GenBank	431060 tax ID	*
[Ref.: #66792]	Roseateles terrae strain CCUG 52222	431060.3	wgs	PATRIC	431060 tax ID	*
[Ref.: #66792]	Roseateles terrae strain CECT 7247	431060.5	wgs	PATRIC	431060 tax ID	*
[Ref.: #66792]	Roseateles terrae CECT 7247	2824392752	draft	JGI IMG/M	431060 tax ID	*
[Ref.: #66792]	Roseateles terrae CCUG 52222	2831895361	draft	JGI IMG/M	431060 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Roseateles terrae CECT 7247 NCBI: GCA_014192155.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseateles terrae CECT 7247 NCBI: GCA_014192155.1
[Ref.: #69480]	flagellated	yes	83.546	no
[Ref.: #69480]	gram-positive	no	98.816	yes
[Ref.: #69480]	anaerobic	no	96.825	yes
[Ref.: #69480]	aerobic	yes	90.174	yes
[Ref.: #69480]	halophile	no	98.254	no
[Ref.: #69480]	spore-forming	no	92.687	no
[Ref.: #69480]	glucose-util	yes	87.65	no
[Ref.: #69480]	thermophile	no	98.943	yes
[Ref.: #69480]	motile	yes	86.811	yes
[Ref.: #69480]	glucose-ferment	no	89.096	no

Availability in culture collections External links

[Ref.: #32233]

Culture collection no.

CECT 7247, CCUG 52222

[Ref.: #91863]

SI-ID 303366

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Roseateles aquatilis sp. nov. and Roseateles terrae sp. nov., in the class Betaproteobacteria, and emended description of the genus Roseateles.	Gomila M, Bowien B, Falsen E, Moore ER, Lalucat J	Int J Syst Evol Microbiol	10.1099/ijs.0.65169-0	2008	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32233

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28475 (see below)

#59473 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 52222

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#91863

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID303366.1 )

#28475

IJSEM 6 2008 ( DOI 10.1099/ijs.0.65169-0 , PubMed 18175673 )

* These data were automatically processed and therefore are not curated

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