Prevotella pleuritidis (JCM 14110, CCUG 54350, GTC 3021)

Name: Prevotella pleuritidis (JCM 14110, CCUG 54350, GTC 3021)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134238

Type strain

Culture col. no. JCM 14110 CCUG 54350 GTC 3021

NCBI tax ID(s) 407975

Special Collections CCUG JCM Literature strains

History JCM <-- T. Ezaki GTC 3021.

Links

Prevotella pleuritidis JCM 14110 is an anaerobe, Gram-negative, rod-shaped bacterium that was isolated from human pleural fluid.

Gram-negative rod-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 294006

JCM 14110,CCUG 54350,DSM 18744

@ref 20215

Last LPSN update 2026-05-29 08:38:17

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella pleuritidis

Full scientific name Prevotella pleuritidis Sakamoto et al. 2007

Synonyms (1)

Hoylesella pleuritidis

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
32054	negative	3 µm	0.8 µm	rod-shaped
125438					90.667
125438	negative				95.757
125439	negative				98.431

Colony morphology

60143

Incubation period2 days

Pigmentation

32054

Productionno

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
60143	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
32054	anaerobe
60143	anaerobe
125438	anaerobe	91.48

Spore formation

@ref	Spore formation	Confidence
32054
125438		91.555
125439		99.895

Observation

67770

Observationquinones: MK-11, MK-12

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32054	17234 ChEBI	glucose	+	carbon source
32054	17716 ChEBI	lactose	+	carbon source
32054	17306 ChEBI	maltose	+	carbon source
32054	37684 ChEBI	mannose	+	carbon source

Enzymes

@ref	Value	Activity
32054	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Oral cavity and Airways	#Pleural fluid
#Infection	#Patient	-
#Host Body-Site	#Oral cavity and airways	-

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
32054	human pleural fluid	Homo sapiens
60143	Human pleural fluid,suppurative pleuritis	Homo sapiens	Gifu ?	Japan	JPN	Asia
67770	Pleural fluid of a patient with suppurative pleuritis	Homo sapiens

Taxonmaps

69479

Global distribution of 16S sequence AB278593 (>99% sequence identity) for Prevotella pleuritidis subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	116
Animal Samples	16012
Plant Samples	86
Total Samples	16402

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM61372v1 assembly for Hoylesella pleuritidis JCM 14110	contig	GCA_000613725	1236494.3	2565956597	1236494	31.74

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
32054	Prevotella pleuritidis gene for 16S ribosomal RNA, partial sequence	AB278593	1467		407975

GC content

@ref	GC-content (mol%)	Method
32054	45.4
67770	45.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM61372v1 assembly for Hoylesella pleuritidis JCM 14110
BV-BRC: 1236494.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	62.93	no
125439	gram_stain	BacteriaNetⓘ	negative	98.43	no
125439	spore_formation	BacteriaNetⓘ	no	99.90	no
125439	motility	BacteriaNetⓘ	no	72.67	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotella pleuritidis JCM 14110
PATRIC: 1236494.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.76	yes
125438	anaerobic	anaerobicⓘ	yes	91.48	no
125438	spore-forming	spore-formingⓘ	no	91.56	yes
125438	aerobic	aerobicⓘ	no	96.83	yes
125438	thermophilic	thermophileⓘ	no	95.35	yes
125438	flagellated	motile2+ⓘ	no	90.67	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prevotella pleuritidis sp. nov., isolated from pleural fluid.	Sakamoto M, Ohkusu K, Masaki T, Kako H, Ezaki T, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.64885-0	2007

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28303	IJSEM 1725 2007 ( DOI 10.1099/ijs.0.64885-0 , PubMed 17684245 )
#32054	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28303
#60143	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54350
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prevotella pleuritidis (JCM 14110, CCUG 54350, GTC 3021)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000613725

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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