Labrys neptuniae (BCRC 17578, LMG 23578, Liujia-146)

Name: Labrys neptuniae (BCRC 17578, LMG 23578, Liujia-146)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134210

Type strain

Strain Designation Liujia-146

Culture col. no. BCRC 17578 LMG 23578 Liujia-146

NCBI tax ID(s) 376174

Special Collections Literature strains

Links

Labrys neptuniae Liujia-146 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from plant associated.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 290805

LMG 23578,BCRC 17578,CCRC 17578

@ref 20215

Last LPSN update 2026-02-09 11:32:08

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Xanthobacteraceae

Genus Labrys

Species Labrys neptuniae

Full scientific name Labrys neptuniae Chou et al. 2007

Synonyms (1)

Labrys portucalensis

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
31864	negative	1.35 µm	0.8 µm	rod-shaped

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
31864	positive	growth	15-35
31864	positive	optimum	29

Culture pH

@ref	Ability	Type	PH	PH range
31864	positive	optimum	7.5
31864	positive	growth	4.0-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

31864

Oxygen toleranceaerobe

Spore formation

31864

Spore formationno

Observation

31864

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31864	18240 ChEBI	4-hydroxy-L-proline	+	carbon source
31864	30089 ChEBI	acetate	+	carbon source
31864	16449 ChEBI	alanine	+	carbon source
31864	22599 ChEBI	arabinose	+	carbon source
31864	22653 ChEBI	asparagine	+	carbon source
31864	35391 ChEBI	aspartate	+	carbon source
31864	17057 ChEBI	cellobiose	+	carbon source
31864	17126 ChEBI	DL-carnitine	+	carbon source
31864	4853 ChEBI	esculin	+	hydrolysis
31864	16000 ChEBI	ethanolamine	+	carbon source
31864	15740 ChEBI	formate	+	carbon source
31864	28757 ChEBI	fructose	+	carbon source
31864	33984 ChEBI	fucose	+	carbon source
31864	28260 ChEBI	galactose	+	carbon source
31864	24175 ChEBI	galacturonate	+	carbon source
31864	16865 ChEBI	gamma-aminobutyric acid	+	carbon source
31864	17234 ChEBI	glucose	+	carbon source
31864	32323 ChEBI	glucuronamide	+	carbon source
31864	29987 ChEBI	glutamate	+	carbon source
31864	17754 ChEBI	glycerol	+	carbon source
31864	28087 ChEBI	glycogen	+	carbon source
31864	27570 ChEBI	histidine	+	carbon source
31864	17596 ChEBI	inosine	+	carbon source
31864	21217 ChEBI	L-alaninamide	+	carbon source
31864	18403 ChEBI	L-arabitol	+	carbon source
31864	24996 ChEBI	lactate	+	carbon source
31864	25017 ChEBI	leucine	+	carbon source
31864	25115 ChEBI	malate	+	carbon source
31864	15792 ChEBI	malonate	+	carbon source
31864	29864 ChEBI	mannitol	+	carbon source
31864	37684 ChEBI	mannose	+	carbon source
31864	28053 ChEBI	melibiose	+	carbon source
31864	37657 ChEBI	methyl D-glucoside	+	carbon source
31864	51850 ChEBI	methyl pyruvate	+	carbon source
31864	17268 ChEBI	myo-inositol	+	carbon source
31864	506227 ChEBI	N-acetylglucosamine	+	carbon source
31864	17632 ChEBI	nitrate	+	reduction
31864	18257 ChEBI	ornithine	+	carbon source
31864	26271 ChEBI	proline	+	carbon source
31864	17272 ChEBI	propionate	+	carbon source
31864	17148 ChEBI	putrescine	+	carbon source
31864	16634 ChEBI	raffinose	+	carbon source
31864	26546 ChEBI	rhamnose	+	carbon source
31864	15963 ChEBI	ribitol	+	carbon source
31864	17822 ChEBI	serine	+	carbon source
31864	30911 ChEBI	sorbitol	+	carbon source
31864	30031 ChEBI	succinate	+	carbon source
31864	26986 ChEBI	threonine	+	carbon source
31864	17748 ChEBI	thymidine	+	carbon source
31864	27082 ChEBI	trehalose	+	carbon source
31864	53423 ChEBI	tween 40	+	carbon source
31864	53426 ChEBI	tween 80	+	carbon source
31864	16704 ChEBI	uridine	+	carbon source
31864	27248 ChEBI	urocanic acid	+	carbon source
31864	17151 ChEBI	xylitol	+	carbon source

Enzymes

@ref	Value	Activity	Ec
31864	acid phosphatase	+	3.1.3.2
31864	alkaline phosphatase	+	3.1.3.1
31864	catalase	+	1.11.1.6
31864	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Plants

Isolation

31864

Sample typeplant associated

Taxonmaps

69479

Global distribution of 16S sequence DQ417335 (>99% sequence identity) for Labrys from Microbeatlas

Aquatic Samples	509
Soil Samples	1324
Animal Samples	273
Plant Samples	169
Total Samples	2275

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4079714v1 assembly for Labrys neptuniae LMG 23578	scaffold	GCA_040797145	376174	67.82

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31864	Labrys neptuniae strain Liujia-146 16S ribosomal RNA gene, partial sequence	DQ417335	1380		376174

GC content

31864

GC-content (mol%)62.7

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Removal of Ibuprofen in Water by Bioaugmentation with Labrys neptuniae CSW11 Isolated from Sewage Sludge-Assessment of Biodegradation Pathway Based on Metabolite Formation and Genomic Analysis.	Aguilar-Romero I, Madrid F, Villaverde J, Alonso E, Santos JL, Morillo E.	J Xenobiot	10.3390/jox15010005	2024
Phylogeny	Description of Labrys sedimenti sp. nov., isolated from a diclofenac-degrading enrichment culture, and genome-based reclassification of Labrys portucalensis as a later heterotypic synonym of Labrys neptuniae.	Csepanyi A, Tancsics A, Papai M, Baka E, Toth E, Boka K, Daood H, Szabo I, Kriszt B.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006778	2025
Phylogeny	Labrys wisconsinensis sp. nov., a budding bacterium isolated from Lake Michigan water, and emended description of the genus Labrys.	Albert RA, Waas NE, Langer S, Pavlons SC, Feldner JL, Rossello-Mora R, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.014977-0	2009
Phylogeny	Labrys neptuniae sp. nov., isolated from root nodules of the aquatic legume Neptunia oleracea.	Chou YJ, Elliott GN, James EK, Lin KY, Chou JH, Sheu SY, Sheu DS, Sprent JI, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.64553-0	2007

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28124	IJSEM 577 2007 ( DOI 10.1099/ijs.0.64553-0 , PubMed 17329788 )
#31864	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28124
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Labrys neptuniae (BCRC 17578, LMG 23578, Liujia-146)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_040797145

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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