Name: Larkinella insperata NCIMB 14103
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134165

Type strain:

Species: Larkinella insperata

Culture col. no.: NCIMB 14103, CCUG 55608, LMG 22510

NCBI tax ID(s): 332158 (species)

Section

Larkinella insperata NCIMB 14103 is an aerobe, Gram-negative, motile bacterium that was isolated from water of steam generator.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Spirosomataceae*
	Genus	*Larkinella*
	Species	**Larkinella insperata**
	Full Scientific Name (PNU)	Larkinella insperata Vancanneyt et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #31640]	Gram stain	negative
[Ref.: #31640]	Cell length	1.5-3 µm
[Ref.: #31640]	Cell width	0.5-0.9 µm
[Ref.: #31640]	Cell shape	rod-shaped
[Ref.: #31640]	Motility	yes
[Ref.: #31640]	Flagellum arrangement	gliding

[Ref.: #31640]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #31640]			growth	10-40 °C
[Ref.: #31640]			optimum	10-40 °C

	pH	Kind of pH		pH	pH range
[Ref.: #31640]			optimum	7
[Ref.: #31640]			growth	7

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31640]

Oxygen tolerance

aerobe

[Ref.: #31640]

Ability of spore formation

[Ref.: #31640]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31640]	arabinose ChEBI	+	carbon source
[Ref.: #31640]	glucose ChEBI	+	carbon source
[Ref.: #31640]	lactose ChEBI	+	carbon source
[Ref.: #31640]	mannose ChEBI	+	carbon source
[Ref.: #31640]	sucrose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #31640]	alkaline phosphatase	+	3.1.3.1
[Ref.: #31640]	catalase	+	1.11.1.6
[Ref.: #31640]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31640]	Sample type/isolated from	water of steam generator

[Ref.: #60669]	Sample type/isolated from	Water,steam generator in a pharmaceutical company
[Ref.: #60669]	Country	Belgium
[Ref.: #60669]	Country ISO 3 Code	BEL
[Ref.: #60669]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Engineered product
#Environmental	#Aquatic	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM000022 (>99% sequence identity) for Larkinella insperata from Microbeatlas

Aquatic Samples	165
Soil Samples	269
Animal Samples	248
Plant Samples	257
Total Samples	939

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31640]	Larkinella insperata 16S rRNA gene, type strain LMG 22510T	AM000022	1466	GenBank	332158 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Larkinella insperata LMG22510	GCA_026248825	complete	GenBank	332158 tax ID	*

[Ref.: #31640]

GC-content

53 mol%

Availability in culture collections External links

[Ref.: #31640]

Culture collection no.

NCIMB 14103, CCUG 55608, LMG 22510

[Ref.: #20218]

Associated Passport(s) in StrainInfo

674874

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Larkinella insperata gen. nov., sp. nov., a bacterium of the phylum 'Bacteroidetes' isolated from water of a steam generator.	Vancanneyt M, Nedashkovskaya OI, Snauwaert C, Mortier S, Vandemeulebroecke K, Hoste B, Dawyndt P, Frolova GM, Janssens D, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.63948-0	2006	*
Phylogeny	Rudanella lutea gen. nov., sp. nov., isolated from an air sample in Korea.	Weon HY, Noh HJ, Son JA, Jang HB, Kim BY, Kwon SW, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/ijs.0.65358-0	2008	*
Phylogeny	Larkinella bovis sp. nov., isolated from fermented bovine products, and emended descriptions of the genus Larkinella and of Larkinella insperata Vancanneyt et al. 2006.	Anandham R, Kwon SW, Weon HY, Kim SJ, Kim YS, Gandhi PI, Kim YK, Jee HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.020453-0	2010	*
Phylogeny	Larkinella harenae sp. nov., Isolated from Korean Beach Soil.	Park SJ, Lee JJ, Lee SY, Lee DS, Kim MK, Ten LN, Jung HY	Curr Microbiol	10.1007/s00284-017-1246-6	2017	*
Phylogeny	Larkinella ripae sp. nov., isolated from seashore soil.	Lee YH, Lee JJ, Lee SY, Lee DS, Kim MK, Ten LN, Jung HY	Int J Syst Evol Microbiol	10.1099/ijsem.0.002188	2017	*
Phylogeny	Larkinella terrae sp. nov., isolated from soil on Jeju Island, South Korea.	Ten LN, Jeon J, Park SJ, Park S, Lee SY, Kim MK, Jung HY	Antonie Van Leeuwenhoek	10.1007/s10482-017-0955-y	2017	*
Phylogeny	Larkinella roseus sp. nov., a species of the family Cytophagaceae isolated from beach soil.	Lee JB, Hong S, Lee SY, Park SJ, Park KI, Choi SG, Kim MK, Ten LN, Jung HY	J Microbiol	10.1007/s12275-018-7476-x	2018	*
Phylogeny	Larkinella knui sp. nov., isolated from soil.	Jeon J, Ten LN, Lee JJ, Lee SY, Park S, Cho YJ, Kim MK, Jung HY	Int J Syst Evol Microbiol	10.1099/ijsem.0.002550	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#31640

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27923 (see below)

#60669 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55608

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27923

IJSEM 237 2006 ( DOI 10.1099/ijs.0.63948-0 , PubMed 16403892 )

* These data were automatically processed and therefore are not curated

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