Name: Spiroplasma penaei SHRIMP
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 134136

Type strain:

Species: Spiroplasma penaei

Strain Designation: SHRIMP

Culture col. no.: ATCC BAA-1082, CAIM 1252

NCBI tax ID(s): 313382 (species)

Special Collections

Literature strains

Section

When using BacDive for research please cite our paper

Spiroplasma penaei SHRIMP is a motile, spiral-shaped bacterium that was isolated from haemolymph of shrimp.

motile
spiral-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Spiroplasmataceae*
	Genus	*Spiroplasma*
	Species	**Spiroplasma penaei**
	Full Scientific Name (LPSN)	Spiroplasma penaei Nunan et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31438]	Cell shape	spiral-shaped

[Ref.: #31438]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #31438]			growth	20-37 °C
[Ref.: #31438]			optimum	28 °C

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31438]		NaCl		growth	0-2	%
[Ref.: #31438]		NaCl		optimum	1	%

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31438]		arginine ChEBI	+	carbon source
[Ref.: #31438]		glucose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31438]	Sample type/isolated from	haemolymph of shrimp
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Crustacea
#Host Body Product	#Fluids	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY771927 (>99% sequence identity) for Spiroplasma from Microbeatlas

Aquatic Samples	37
Soil Samples	14
Animal Samples	264
Plant Samples	4
Total Samples	319

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31438]	Spiroplasma penaei strain SHRIMP 16S ribosomal RNA gene, partial sequence	AY771927	1452	GenBank ENA	313382 tax ID

[Ref.: #31438]

GC-content

29 mol%

Availability in culture collections External links

[Ref.: #31438]

Culture collection no.

ATCC BAA-1082, CAIM 1252

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Phylogenetic analysis of the pathogenic bacteria Spiroplasma penaei based on multilocus sequence analysis.	Heres A, Lightner DV	J Invertebr Pathol	10.1016/j.jip.2009.10.004	2009	*
Phylogeny	Spiroplasma penaei sp. nov., associated with mortalities in Penaeus vannamei, Pacific white shrimp.	Nunan LM, Lightner DV, Oduori MA, Gasparich GE	Int J Syst Evol Microbiol	10.1099/ijs.0.63555-0	2005	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31438

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27743 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27743

IJSEM 2317 2005 ( DOI 10.1099/ijs.0.63555-0 , PubMed 16280489 )

* These data were automatically processed and therefore are not curated

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