Name: Pseudonocardia yuanmonensis DSM 45676
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13411

Type strain:

Species: Pseudonocardia yuanmonensis

Culture col. no.: DSM 45676, CCTCC AA 2011017, JCM 18055, YIM 75926

Strain history: S.-K. Tang YIM 75926.

NCBI tax ID(s): 1095914 (species)

SI-ID 400958

DSM 45676

Special Collections

DSMZ
JCM

Section

Pseudonocardia yuanmonensis DSM 45676 is a bacterium that was isolated from soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Pseudonocardia*
	Species	**Pseudonocardia yuanmonensis**
	Full Scientific Name (LPSN)	Pseudonocardia yuanmonensis corrig. Nie et al. 2012

Synonym

Pseudonocardia yuanmoensis

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18042]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #18042]

Culture medium growth

[Ref.: #18042]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18042]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #18042]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18042]	Sample type/isolated from	soil
[Ref.: #18042]	Geographic location (country and/or sea, region)	Yunnan Province, Yuanmo, soil forest
[Ref.: #18042]	Country	China
[Ref.: #18042]	Country ISO 3 Code	CHN
[Ref.: #18042]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil from the county of Yuanmo
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yunnan Province, south-west China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JN656709 (>99% sequence identity) for Pseudonocardia from Microbeatlas

Aquatic Samples	140
Soil Samples	657
Animal Samples	122
Plant Samples	209
Total Samples	1128

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18042]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18042]	Pseudonocardia yuanmonensis strain YIM 75926 16S ribosomal RNA gene, partial sequence	JN656709	1518	GenBank ENA	1095914 tax ID

[Ref.: #18042]

GC-content

70.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #18042]

Culture collection no.

DSM 45676, CCTCC AA 2011017, JCM 18055, YIM 75926

[Ref.: #82608]

SI-ID 400958

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudonocardia lutea sp. nov., a novel actinobacterium isolated from soil in Chad.	Gao Y, Piao C, Wang H, Shi L, Guo X, Song J, Xiang W, Zhao J, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.002780	2018	*
Phylogeny	Pseudonocardia yuanmoensis sp. nov., a novel actinobacterium isolated from soil in Yunnan, south-west China.	Nie GX, Ming H, Wei DQ, Zhou EM, Tang X, Cheng J, Tang SK, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-011-9689-4	2011	*

References

#18042

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45676

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#82608

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400958.1 )

* These data were automatically processed and therefore are not curated

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