Marinobacter mobilis (CGMCC 1.7059, JCM 15154, CN 46)

Name: Marinobacter mobilis (CGMCC 1.7059, JCM 15154, CN 46)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134085

Type strain

Culture col. no. CGMCC 1.7059 JCM 15154 CN 46

NCBI tax ID(s) 488533

Special Collections JCM Literature strains

History X.-W. Xu CN46.

Links

Marinobacter mobilis CGMCC 1.7059 is an aerobe, Gram-negative, motile prokaryote that was isolated from marine sediment.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 133505

JCM 15154

@ref 20215

Last LPSN update 2026-02-09 11:32:06

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Alteromonadaceae

Genus Marinobacter

Species Marinobacter mobilis

Full scientific name Marinobacter mobilis Huo et al. 2008

BacDive ID	Other strains from **Marinobacter mobilis** (1)	Type strain
161584	M. mobilis JCM 15155, CGMCC 1.7060

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
31195	negative	1.5-3 µm	0.5-0.8 µm	rod-shaped
125438					90.024
125438	negative				98.5
125439	negative				99.8

Pigmentation

31195

Productionno

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
31195	positive	growth	15-42
31195	positive	optimum	30-35	mesophilic
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
31195	positive	optimum	7-7.5
31195	positive	growth	6.5-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

31195

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
31195
125438		91.427
125439		99.6

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31195	NaCl	positive	growth	0.5-10 %
31195	NaCl	positive	optimum	03-05 %

Observation

31195

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31195	30089 ChEBI	acetate	+	carbon source
31195	29987 ChEBI	glutamate	+	carbon source
31195	24996 ChEBI	lactate	+	carbon source
31195	25115 ChEBI	malate	+	carbon source
31195	17632 ChEBI	nitrate	+	reduction
31195	17272 ChEBI	propionate	+	carbon source
31195	15361 ChEBI	pyruvate	+	carbon source
31195	30031 ChEBI	succinate	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
31195	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
31195	catalase	+	1.11.1.6
31195	cytochrome oxidase	+	1.9.3.1

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	denitrification	100	2 of 2
66794	cardiolipin biosynthesis	100	7 of 7
66794	L-lactaldehyde degradation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	biotin biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	octane oxidation	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ceramide biosynthesis	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	aminopropanol phosphate biosynthesis	100	2 of 2
66794	suberin monomers biosynthesis	100	2 of 2
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	isoleucine metabolism	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	lipid metabolism	83.87	26 of 31
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	propionate fermentation	80	8 of 10
66794	peptidoglycan biosynthesis	80	12 of 15
66794	lipid A biosynthesis	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	leucine metabolism	76.92	10 of 13
66794	vitamin B1 metabolism	76.92	10 of 13
66794	phenylalanine metabolism	76.92	10 of 13
66794	phenol degradation	75	15 of 20
66794	acetate fermentation	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	glutamate and glutamine metabolism	75	21 of 28
66794	sulfopterin metabolism	75	3 of 4
66794	coenzyme A metabolism	75	3 of 4
66794	flavin biosynthesis	73.33	11 of 15
66794	vitamin B6 metabolism	72.73	8 of 11
66794	glutathione metabolism	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	purine metabolism	70.21	66 of 94
66794	Entner Doudoroff pathway	70	7 of 10
66794	cyanate degradation	66.67	2 of 3
66794	arginine metabolism	66.67	16 of 24
66794	acetoin degradation	66.67	2 of 3
66794	methane metabolism	66.67	2 of 3
66794	serine metabolism	66.67	6 of 9
66794	alanine metabolism	65.52	19 of 29
66794	citric acid cycle	64.29	9 of 14
66794	heme metabolism	64.29	9 of 14
66794	pentose phosphate pathway	63.64	7 of 11
66794	proline metabolism	63.64	7 of 11
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	ketogluconate metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	sulfate reduction	61.54	8 of 13
66794	tryptophan metabolism	60.53	23 of 38
66794	gallate degradation	60	3 of 5
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	lipoate biosynthesis	60	3 of 5
66794	non-pathway related	57.89	22 of 38
66794	methionine metabolism	57.69	15 of 26
66794	propanol degradation	57.14	4 of 7
66794	pyrimidine metabolism	55.56	25 of 45
66794	d-mannose degradation	55.56	5 of 9
66794	nitrate assimilation	55.56	5 of 9
66794	lysine metabolism	54.76	23 of 42
66794	urea cycle	53.85	7 of 13
66794	3-phenylpropionate degradation	53.33	8 of 15
66794	histidine metabolism	51.72	15 of 29
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	pantothenate biosynthesis	50	3 of 6
66794	ribulose monophosphate pathway	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	glycogen biosynthesis	50	2 of 4
66794	androgen and estrogen metabolism	50	8 of 16
66794	cysteine metabolism	50	9 of 18
66794	isoprenoid biosynthesis	50	13 of 26
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	phenylmercury acetate degradation	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	arachidonic acid metabolism	44.44	8 of 18
66794	benzoyl-CoA degradation	42.86	3 of 7
66794	vitamin B12 metabolism	41.18	14 of 34
66794	ascorbate metabolism	40.91	9 of 22
66794	oxidative phosphorylation	40.66	37 of 91
66794	arachidonate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	glycogen metabolism	40	2 of 5
66794	glycine betaine biosynthesis	40	2 of 5
66794	bacilysin biosynthesis	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	metabolism of disaccharids	36.36	4 of 11
66794	polyamine pathway	34.78	8 of 23
66794	enterobactin biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	sphingosine metabolism	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	degradation of pentoses	32.14	9 of 28
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	coenzyme M biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	tyrosine metabolism	28.57	4 of 14
66794	toluene degradation	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	carotenoid biosynthesis	22.73	5 of 22
66794	chlorophyll metabolism	22.22	4 of 18
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	daunorubicin biosynthesis	22.22	2 of 9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
31195	marine sediment
67770	Marine sediment	Zhejiang	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence EU293412 (>99% sequence identity) for Marinobacter mobilis subclade from Microbeatlas

Aquatic Samples	2
Soil Samples
Animal Samples
Plant Samples
Total Samples	2

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2617270765 annotated assembly for Marinobacter mobilis CGMCC 1.7059	scaffold	GCA_900106945	488533.3	2617270765	488533	69.79

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31195	Marinobacter mobilis strain CN46 16S ribosomal RNA gene, partial sequence	EU293412	1429		488533

GC content

@ref	GC-content (mol%)	Method
31195	58.4
67770	58.0-58.9	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Marinobacter mobilis CGMCC 1.7059
NCBI: GCA_900106945

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.60	no
125439	motility	BacteriaNetⓘ	yes	89.90	no
125439	gram_stain	BacteriaNetⓘ	negative	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative aerobe	70.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Marinobacter mobilis strain CGMCC 1.7059
PATRIC: 488533.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	yes
125438	anaerobic	anaerobicⓘ	no	96.80	yes
125438	spore-forming	spore-formingⓘ	no	91.43	yes
125438	aerobic	aerobicⓘ	yes	84.96	yes
125438	thermophilic	thermophileⓘ	no	97.81	no
125438	flagellated	motile2+ⓘ	yes	90.02	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Prokaryotic viperins produce diverse antiviral molecules.	Bernheim A, Millman A, Ofir G, Meitav G, Avraham C, Avraham C, Shomar H, Rosenberg MM, Tal N, Melamed S, Amitai G, Sorek R.	Nature	10.1038/s41586-020-2762-2	2021
Phylogeny	Marinobacter mobilis sp. nov. and Marinobacter zhejiangensis sp. nov., halophilic bacteria isolated from the East China Sea.	Huo YY, Wang CS, Yang JY, Wu M, Xu XW	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000786-0	2008
Phylogeny	Marinobacter nitratireducens sp. nov., a halophilic and lipolytic bacterium isolated from coastal surface sea water.	Vaidya B, Kumar R, Korpole S, Tanuku NRS, Pinnaka AK	Int J Syst Evol Microbiol	10.1099/ijs.0.000218	2015
Phylogeny	Marinobacter xestospongiae sp. nov., isolated from the marine sponge Xestospongia testudinaria collected from the Red Sea.	Lee OO, Lai PY, Wu HX, Zhou XJ, Miao L, Wang H, Qian PY	Int J Syst Evol Microbiol	10.1099/ijs.0.028811-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27522	IJSEM 2885 2008 ( DOI 10.1099/ijs.0.2008/000786-0 , PubMed 19060077 )
#31195	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27522
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Marinobacter mobilis (CGMCC 1.7059, JCM 15154, CN 46)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_900106945

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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