Name: Mesorhizobium tarimense LMG 24338
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134077

Type strain:

Species: Mesorhizobium tarimense

Culture col. no.: LMG 24338, HAMBI 2973, CCBAU 83306

NCBI tax ID(s): 410755 (species)

SI-ID 293622

HAMBI 2973, LMG 24338, LMG 23952

Section

Mesorhizobium tarimense LMG 24338 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from soil.

Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Phyllobacteriaceae*
	Genus	*Mesorhizobium*
	Species	**Mesorhizobium tarimense**
	Full Scientific Name (LPSN)	Mesorhizobium tarimense Han et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #31182]	Gram stain	negative

[Ref.: #31182]	Cell length	01-03 µm

[Ref.: #31182]	Cell width	0.3-0.6 µm

[Ref.: #31182]	Cell shape	rod-shaped

[Ref.: #31182]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #31182]			growth	25-30 °C
[Ref.: #31182]			optimum	25-30 °C

[Ref.: #31182]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #31182]			optimum	06-08
[Ref.: #31182]			growth	05-08

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31182]

Oxygen tolerance

aerobe

[Ref.: #31182]

Ability of spore formation

[Ref.: #31182]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31182]	arabinose ChEBI	+	carbon source
[Ref.: #31182]	arginine ChEBI	+	carbon source
[Ref.: #31182]	aspartate ChEBI	+	carbon source
[Ref.: #31182]	dextrin ChEBI	+	carbon source
[Ref.: #31182]	fructose ChEBI	+	carbon source
[Ref.: #31182]	galactose ChEBI	+	carbon source
[Ref.: #31182]	glucose ChEBI	+	carbon source
[Ref.: #31182]	lactose ChEBI	+	carbon source
[Ref.: #31182]	maltose ChEBI	+	carbon source
[Ref.: #31182]	mannose ChEBI	+	carbon source
[Ref.: #31182]	proline ChEBI	+	carbon source
[Ref.: #31182]	rhamnose ChEBI	+	carbon source
[Ref.: #31182]	sucrose ChEBI	+	carbon source
[Ref.: #31182]	trehalose ChEBI	+	carbon source
[Ref.: #31182]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #31182]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31182]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EF035058 (>99% sequence identity) for Mesorhizobium from Microbeatlas

Aquatic Samples	507
Soil Samples	2635
Animal Samples	282
Plant Samples	1035
Total Samples	4459

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31182]	Mesorhizobium tarimense strain CCBAU 83306 16S ribosomal RNA gene, partial sequence	EF035058	1377	GenBank	410755 tax ID

[Ref.: #31182]

GC-content

57.85 mol%

Availability in culture collections External links

[Ref.: #31182]

Culture collection no.

LMG 24338, HAMBI 2973, CCBAU 83306

[Ref.: #91694]

SI-ID 293622

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mesorhizobium helmanticense sp. nov., isolated from Lotus corniculatus nodules.	Marcos-Garcia M, Menendez E, Ramirez-Bahena MH, Mateos PF, Peix A, Velazquez E, Rivas R	Int J Syst Evol Microbiol	10.1099/ijsem.0.001942	2017	*
Phylogeny	Mesorhizobium gobiense sp. nov. and Mesorhizobium tarimense sp. nov., isolated from wild legumes growing in desert soils of Xinjiang, China.	Han TX, Han LL, Wu LJ, Chen WF, Sui XH, Gu JG, Wang ET, Chen WX	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000125-0	2008	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31182

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27509 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91694

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID293622.1 )

#27509

IJSEM 2610 2008 ( DOI 10.1099/ijs.0.2008/000125-0 , PubMed 18984702 )

* These data were automatically processed and therefore are not curated

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