Chryseobacterium angstadtii (ATCC BAA-2160, NRRL B-59516, KCTC 23297)

Name: Chryseobacterium angstadtii (ATCC BAA-2160, NRRL B-59516, KCTC 23297)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134065

Type strain

Strain Designation KM

Culture col. no. ATCC BAA-2160 NRRL B-59516 KCTC 23297 KM

NCBI tax ID(s) 558151

Special Collections KCTC Literature strains

History <- Jeffrey D Newman, ycoming College, USA

Links

Chryseobacterium angstadtii KM is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from built environment.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 365343

LMG 27880,KCTC 23297,ATCC BAA-2160

@ref 20215

Last LPSN update 2026-02-09 11:32:06

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Weeksellaceae

Genus Chryseobacterium

Species Chryseobacterium angstadtii

Full scientific name Chryseobacterium angstadtii Kirk et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
31163	negative	2.5 µm	0.5 µm	rod-shaped
67771				rod-shaped
67771	negative
125439	negative				99.7

Pigmentation

31163

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
31163	positive	growth	20-30
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
31163	positive	optimum	7.25
31163	positive	growth	5.5-8.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31163	aerobe
67771	aerobe
125439	obligate aerobe	92.8

Spore formation

@ref	Spore formation	Confidence
31163
67771
125439		98.2

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31163	NaCl	positive	growth	0-2 %

Observation

67771

Observationquinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31163	30089 ChEBI	acetate	+	carbon source
31163	17128 ChEBI	adipate	+	carbon source
31163	35391 ChEBI	aspartate	+	carbon source
31163	16947 ChEBI	citrate	+	carbon source
31163	23652 ChEBI	dextrin	+	carbon source
31163	4853 ChEBI	esculin	+	hydrolysis
31163	5291 ChEBI	gelatin	+	carbon source
31163	17234 ChEBI	glucose	+	carbon source
31163	29987 ChEBI	glutamate	+	carbon source
31163	17754 ChEBI	glycerol	+	carbon source
31163	17306 ChEBI	maltose	+	carbon source
31163	37684 ChEBI	mannose	+	carbon source
31163	27082 ChEBI	trehalose	+	carbon source
31163	53423 ChEBI	tween 40	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
31163	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
31163	35581 ChEBI	indole	+

Enzymes

@ref	Value	Activity	Ec
31163	acid phosphatase	+	3.1.3.2
31163	alkaline phosphatase	+	3.1.3.1
31163	alpha-galactosidase	+	3.2.1.22
31163	catalase	+	1.11.1.6
31163	cytochrome oxidase	+	1.9.3.1
31163	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Engineered	#Built environment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
31163	built environment
67771	From tank containing red-spotted newts, `Notophthalmus viridescens`	Williamsport	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence EU999734 (>99% sequence identity) for Chryseobacterium angstadtii subclade from Microbeatlas

Aquatic Samples
Soil Samples	1
Animal Samples	3
Plant Samples	21
Total Samples	25

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	ASM104546v1 assembly for Chryseobacterium angstadtii KM	contig	GCA_001045465	2645727576	558151	76.92

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31163	Chryseobacterium angstadtii strain KM 16S ribosomal RNA gene, partial sequence	EU999734	1417		558151

GC content

31163

GC-content (mol%)38.1

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Chryseobacterium angstadtii KM
NCBI: GCA_001045465

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.20	no
125439	motility	BacteriaNetⓘ	no	80.40	no
125439	gram_stain	BacteriaNetⓘ	negative	99.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	92.80	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Catalytic mechanism of ancestral L-lysine oxidase assigned by sequence data mining.	Sugiura S, Nakano S, Niwa M, Hasebe F, Matsui D, Ito S.	J Biol Chem	10.1016/j.jbc.2021.101043	2021
Phylogeny	Chryseobacterium angstadtii sp. nov., isolated from a newt tank.	Kirk KE, Hoffman JA, Smith KA, Strahan BL, Failor KC, Krebs JE, Gale AN, Do TD, Sontag TC, Batties AM, Mistiszyn K, Newman JD	Int J Syst Evol Microbiol	10.1099/ijs.0.054478-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27491	IJSEM 4777 2013 ( DOI 10.1099/ijs.0.054478-0 , PubMed 23996834 )
#31163	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27491
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Chryseobacterium angstadtii (ATCC BAA-2160, NRRL B-59516, KCTC 23297)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_001045465

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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