Name: Paucilactobacillus nenjiangensis 11102
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134061

Type strain:

Species: Paucilactobacillus nenjiangensis

Strain Designation: 11102

Culture col. no.: LMG 27192, NCIMB 14833, JCM 30919, CIP 110707

Strain history: CIP <- 2014, LMG <- 2010, 2012, C. Gu, Northeast Agric. Univ., Heilongjiang Province, China: strain 11102

NCBI tax ID(s): 1296540 (species)

SI-ID 381217

LMG 27192, NCIMB 14833, JCM 30919, CIP 110707

Section

Paucilactobacillus nenjiangensis 11102 is a facultative anaerobe, mesophilic, Gram-positive bacterium that was isolated from Traditional pickle.

Gram-positive
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Paucilactobacillus*
	Species	**Paucilactobacillus nenjiangensis**
	Full Scientific Name (LPSN)	Paucilactobacillus nenjiangensis (Gu et al. 2013) Zheng et al. 2020

Synonym

Lactobacillus nenjiangensis

Information on morphological and physiological properties Morphology

[Ref.: #31160]	Gram stain	positive
[Ref.: #121264]	Gram stain	positive

[Ref.: #31160]	Cell length	2 µm

[Ref.: #31160]	Cell width	0.9 µm

[Ref.: #31160]	Cell shape	rod-shaped
[Ref.: #121264]	Cell shape	rod-shaped

[Ref.: #31160]	Motility	no
[Ref.: #121264]	Motility	no

[Ref.: #31160]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #41610]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #41610]

Culture medium growth

[Ref.: #41610]

Culture medium composition

expand / minimize

[Ref.: #121264]

Culture medium

CIP Medium 40

[Ref.: #121264]

Culture medium growth

[Ref.: #121264]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #31160]	growth	37 °C
[Ref.: #41610]	growth	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #31160]	Temperature range	mesophilic
[Ref.: #41610]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31160]			growth	4

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31160]

Oxygen tolerance

facultative anaerobe

[Ref.: #31160]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31160]		NaCl		growth	5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31160]	arabinose ChEBI	+	carbon source
[Ref.: #31160]	fructose ChEBI	+	carbon source
[Ref.: #31160]	galactose ChEBI	+	carbon source
[Ref.: #31160]	gluconate ChEBI	+	carbon source
[Ref.: #31160]	glucose ChEBI	+	carbon source
[Ref.: #31160]	maltose ChEBI	+	carbon source
[Ref.: #31160]	ribose ChEBI	+	carbon source
[Ref.: #31160]	sucrose ChEBI	+	carbon source
[Ref.: #31160]	xylose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Traditional pickle
[Ref.: #67770]	Geographic location (country and/or sea, region)	Heilongjiang Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #121264]	Sample type/isolated from	Traditional pickle, sourdough
[Ref.: #121264]	Geographic location (country and/or sea, region)	Heilongjiang Province, China
[Ref.: #121264]	Country	China
[Ref.: #121264]	Country ISO 3 Code	CHN
[Ref.: #121264]	Continent	Asia
[Ref.: #121264]	Isolation date	2010
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HF679039 (>99% sequence identity) for Paucilactobacillus from Microbeatlas

Aquatic Samples	3086
Soil Samples	1014
Animal Samples	4002
Plant Samples	304
Total Samples	8406

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #121264]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31160]	Lactobacillus nenjiangensis partial 16S rRNA gene, type strain 11102T	HF679039	1450	GenBank	1296540 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paucilactobacillus nenjiangensis 11102	GCA_005405445	contig	GenBank	1296540 tax ID
[Ref.: #66792]	Lactobacillus nenjiangensis strain 11102	1296540.6	wgs	PATRIC	1296540 tax ID	*

[Ref.: #31160]	GC-content	41.2 mol%
[Ref.: #67770]	GC-content	38.7 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	41.2 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus nenjiangensis strain 11102 PATRIC: 1296540.6
[Ref.: #69480]	motile	no	96.326	yes
[Ref.: #69480]	gram-positive	yes	97.1	yes
[Ref.: #69480]	anaerobic	no	92.387	yes
[Ref.: #69480]	aerobic	no	97.377	yes
[Ref.: #69480]	halophile	yes	93.97	no
[Ref.: #69480]	spore-forming	no	94.149	no
[Ref.: #69480]	thermophile	no	98.66	no
[Ref.: #69480]	glucose-util	yes	89.061	yes
[Ref.: #69480]	flagellated	no	98.205	yes
[Ref.: #69480]	glucose-ferment	yes	89.555	no

Availability in culture collections External links

[Ref.: #31160]

Culture collection no.

LMG 27192, NCIMB 14833, JCM 30919, CIP 110707

[Ref.: #91688]

SI-ID 381217

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31160

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27488 (see below)

#41610 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#91688

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID381217.1 )

#121264 Collection of Institut Pasteur ; Curators of the CIP; CIP 110707

#27488

IJSEM 4698 2013 ( DOI 10.1099/ijs.0.054296-0 , PubMed 23950151 )

* These data were automatically processed and therefore are not curated

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Lactobacillus nenjiangensis strain 11102

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