Terriglobus roseus DSM 18391 is a mesophilic prokaryote that was isolated from soil.
mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Acidobacteriota |
| Class Terriglobia |
| Order Terriglobales |
| Family Acidobacteriaceae |
| Genus Terriglobus |
| Species Terriglobus roseus |
| Full scientific name Terriglobus roseus Eichorst et al. 2007 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7520 | R2A MEDIUM (DSMZ Medium 830) | Medium recipe at MediaDive | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate aerobe | 99.1 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 95.2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 22970 | 16808 ChEBI | 2-dehydro-D-gluconate | - | assimilation | |
| 22970 | 58143 ChEBI | 5-dehydro-D-gluconate | - | assimilation | |
| 22970 | 30089 ChEBI | acetate | - | assimilation | |
| 22970 | 17128 ChEBI | adipate | - | assimilation | |
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 22970 | 58187 ChEBI | alginate | - | hydrolysis | |
| 22970 | 27613 ChEBI | amygdalin | - | assimilation | |
| 22970 | 18305 ChEBI | arbutin | - | assimilation | |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 22970 | 17057 ChEBI | cellobiose | + | assimilation | |
| 22970 | 62968 ChEBI | cellulose | - | hydrolysis | |
| 22970 | 17029 ChEBI | chitin | - | hydrolysis | |
| 22970 | 16261 ChEBI | chitosan | - | hydrolysis | |
| 22970 | 16947 ChEBI | citrate | - | assimilation | |
| 22970 | 15570 ChEBI | D-alanine | - | assimilation | |
| 22970 | 18333 ChEBI | D-arabitol | - | assimilation | |
| 22970 | 15824 ChEBI | D-fructose | + | assimilation | |
| 22970 | 28847 ChEBI | D-fucose | - | assimilation | |
| 22970 | 12936 ChEBI | D-galactose | + | assimilation | |
| 22970 | 17634 ChEBI | D-glucose | + | assimilation | |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 22970 | 62318 ChEBI | D-lyxose | - | assimilation | |
| 22970 | 62318 ChEBI | D-lyxose | + | assimilation | |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 22970 | 16024 ChEBI | D-mannose | + | assimilation | |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 22970 | 16988 ChEBI | D-ribose | - | assimilation | |
| 22970 | 17924 ChEBI | D-sorbitol | - | assimilation | |
| 22970 | 16443 ChEBI | D-tagatose | - | assimilation | |
| 22970 | 65327 ChEBI | D-xylose | + | assimilation | |
| 22970 | 27689 ChEBI | decanoate | - | assimilation | |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 22970 | 17113 ChEBI | erythritol | - | assimilation | |
| 22970 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | + | hydrolysis | from API 20NE |
| 22970 | 15740 ChEBI | formate | - | assimilation | |
| 22970 | 16813 ChEBI | galactitol | - | assimilation | |
| 22970 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 22970 | 28066 ChEBI | gentiobiose | + | assimilation | |
| 22970 | 24265 ChEBI | gluconate | - | assimilation | |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 22970 | 17234 ChEBI | glucose | - | fermentation | |
| 22970 | 17754 ChEBI | glycerol | - | assimilation | |
| 22970 | 15428 ChEBI | glycine | - | assimilation | |
| 22970 | 28087 ChEBI | glycogen | - | assimilation | |
| 22970 | 15443 ChEBI | inulin | - | assimilation | |
| 22970 | 16977 ChEBI | L-alanine | - | assimilation | |
| 22970 | 30849 ChEBI | L-arabinose | + | assimilation | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 22970 | 18403 ChEBI | L-arabitol | - | assimilation | |
| 22970 | 18287 ChEBI | L-fucose | - | assimilation | |
| 22970 | 15603 ChEBI | L-leucine | - | assimilation | |
| 22970 | 15729 ChEBI | L-ornithine | - | assimilation | |
| 22970 | 62345 ChEBI | L-rhamnose | + | assimilation | |
| 22970 | 17266 ChEBI | L-sorbose | - | assimilation | |
| 22970 | 17716 ChEBI | lactose | + | assimilation | |
| 22970 | 6364 ChEBI | laminarin | + | hydrolysis | |
| 22970 | 6452 ChEBI | lichenin | - | hydrolysis | |
| 22970 | 25115 ChEBI | malate | - | assimilation | |
| 68369 | 25115 ChEBI | malate | - | assimilation | from API 20NE |
| 22970 | 17306 ChEBI | maltose | + | assimilation | |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 22970 | 29864 ChEBI | mannitol | - | assimilation | |
| 22970 | 6731 ChEBI | melezitose | - | assimilation | |
| 22970 | 28053 ChEBI | melibiose | + | assimilation | |
| 22970 | 43943 ChEBI | methyl alpha-D-mannoside | - | assimilation | |
| 22970 | 43943 ChEBI | methyl alpha-D-mannoside | + | assimilation | |
| 22970 | 37657 ChEBI | methyl D-glucoside | - | assimilation | |
| 22970 | 17268 ChEBI | myo-inositol | + | assimilation | |
| 22970 | 506227 ChEBI | N-acetylglucosamine | + | assimilation | |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 22970 | 17632 ChEBI | nitrate | - | reduction | |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 22970 | 17309 ChEBI | pectin | + | hydrolysis | |
| 22970 | 27941 ChEBI | pullulan | - | hydrolysis | |
| 22970 | 16634 ChEBI | raffinose | + | assimilation | |
| 22970 | 15963 ChEBI | ribitol | - | assimilation | |
| 22970 | 64243 ChEBI | sodium L-glutamate | - | assimilation | |
| 22970 | 28017 ChEBI | starch | + | hydrolysis | |
| 22970 | 17992 ChEBI | sucrose | + | assimilation | |
| 22970 | 27082 ChEBI | trehalose | - | assimilation | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 22970 | 32528 ChEBI | turanose | + | assimilation | |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| 22970 | 17151 ChEBI | xylitol | - | assimilation |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 22970 | acid phosphatase | + | 3.1.3.2 | |
| 22970 | alkaline phosphatase | + | 3.1.3.1 | |
| 22970 | alpha-chymotrypsin | - | 3.4.21.1 | |
| 22970 | alpha-fucosidase | + | 3.2.1.51 | |
| 22970 | alpha-galactosidase | + | 3.2.1.22 | |
| 22970 | alpha-glucosidase | + | 3.2.1.20 | |
| 22970 | alpha-mannosidase | + | 3.2.1.24 | |
| 22970 | arginine dihydrolase | - | 3.5.3.6 | |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 22970 | beta-galactosidase | + | 3.2.1.23 | |
| 22970 | beta-glucosidase | + | 3.2.1.21 | |
| 68369 | beta-glucosidase | + | 3.2.1.21 | from API 20NE |
| 22970 | beta-glucuronidase | + | 3.2.1.31 | |
| 7520 | catalase | + | 1.11.1.6 | |
| 22970 | catalase | + | 1.11.1.6 | |
| 22970 | cytochrome oxidase | - | 1.9.3.1 | |
| 22970 | esterase (C 4) | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 22970 | leucine arylamidase | + | 3.4.11.1 | |
| 22970 | lipase (C 14) | - | ||
| 22970 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | |
| 22970 | naphthol-AS-BI-phosphohydrolase | + | ||
| 22970 | trypsin | + | 3.4.21.4 | |
| 22970 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 22970 | valine arylamidase | - |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | kanosamine biosynthesis II | 100 | 2 of 2 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | quinate degradation | 100 | 2 of 2 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | ||
| 66794 | d-mannose degradation | 88.89 | 8 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | ||
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | ||
| 66794 | ubiquinone biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | NAD metabolism | 83.33 | 15 of 18 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | glycine betaine biosynthesis | 80 | 4 of 5 | ||
| 66794 | degradation of pentoses | 78.57 | 22 of 28 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | serine metabolism | 77.78 | 7 of 9 | ||
| 66794 | lipid A biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | purine metabolism | 76.6 | 72 of 94 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | flavin biosynthesis | 73.33 | 11 of 15 | ||
| 66794 | d-xylose degradation | 72.73 | 8 of 11 | ||
| 66794 | degradation of hexoses | 72.22 | 13 of 18 | ||
| 66794 | degradation of sugar acids | 72 | 18 of 25 | ||
| 66794 | reductive acetyl coenzyme A pathway | 71.43 | 5 of 7 | ||
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | pyrimidine metabolism | 68.89 | 31 of 45 | ||
| 66794 | degradation of sugar alcohols | 68.75 | 11 of 16 | ||
| 66794 | glutamate and glutamine metabolism | 67.86 | 19 of 28 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | 1,4-dihydroxy-6-naphthoate biosynthesis | 66.67 | 4 of 6 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | glycolate and glyoxylate degradation | 66.67 | 4 of 6 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | non-pathway related | 65.79 | 25 of 38 | ||
| 66794 | histidine metabolism | 65.52 | 19 of 29 | ||
| 66794 | lipid metabolism | 64.52 | 20 of 31 | ||
| 66794 | isoleucine metabolism | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | tryptophan metabolism | 60.53 | 23 of 38 | ||
| 66794 | lysine metabolism | 59.52 | 25 of 42 | ||
| 66794 | alanine metabolism | 58.62 | 17 of 29 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 58.33 | 7 of 12 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | isoprenoid biosynthesis | 57.69 | 15 of 26 | ||
| 66794 | aclacinomycin biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | citric acid cycle | 57.14 | 8 of 14 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | phenol degradation | 55 | 11 of 20 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | leucine metabolism | 53.85 | 7 of 13 | ||
| 66794 | polyamine pathway | 52.17 | 12 of 23 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | myo-inositol biosynthesis | 50 | 5 of 10 | ||
| 66794 | arginine metabolism | 50 | 12 of 24 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | oxidative phosphorylation | 46.15 | 42 of 91 | ||
| 66794 | arachidonic acid metabolism | 44.44 | 8 of 18 | ||
| 66794 | ascorbate metabolism | 40.91 | 9 of 22 | ||
| 66794 | carotenoid biosynthesis | 40.91 | 9 of 22 | ||
| 66794 | gallate degradation | 40 | 2 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 40 | 2 of 5 | ||
| 66794 | 3-phenylpropionate degradation | 40 | 6 of 15 | ||
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | hydrogen production | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | urea cycle | 38.46 | 5 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 38.46 | 5 of 13 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 38.46 | 5 of 13 | ||
| 66794 | androgen and estrogen metabolism | 37.5 | 6 of 16 | ||
| 66794 | carnitine metabolism | 37.5 | 3 of 8 | ||
| 66794 | cholesterol biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | 4-hydroxymandelate degradation | 33.33 | 3 of 9 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 30 | 3 of 10 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | vitamin B6 metabolism | 27.27 | 3 of 11 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | vitamin B12 metabolism | 26.47 | 9 of 34 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | daunorubicin biosynthesis | 22.22 | 2 of 9 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 7520 | soil | Michigan State University, Michigan, W.K.Kellogg Biological Station Long-Term Ecological Research (KBS LTER) | USA | USA | North America |
Global distribution of 16S sequence DQ660892 (>99% sequence identity) for Terriglobus roseus subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM26542v1 assembly for Terriglobus roseus DSM 18391 | complete | 926566 | 89.19 | ||||
| 66792 | Terriglobus roseus DSM 18391 | complete | 926566 | 85.6 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 7520 | Terriglobus roseus strain KBS 63 16S ribosomal RNA gene, partial sequence | DQ660892 | 1420 | 392734 |
| 22970 | GC-content (mol%)59.8 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 95.20 | no |
| 125439 | motility | BacteriaNetⓘ | no | 52.70 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.10 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 90.97 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 89.01 | no |
| 125438 | aerobic | aerobicⓘ | yes | 80.21 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 83.56 | no |
| 125438 | thermophilic | thermophileⓘ | no | 92.88 | no |
| 125438 | flagellated | motile2+ⓘ | no | 60.45 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| Building a Cell House from Cellulose: The Case of the Soil Acidobacterium Acidisarcina polymorpha SBC82T. | Belova SE, Naumoff DG, Suzina NE, Kovalenko VV, Loiko NG, Sorokin VV, Dedysh SN. | Microorganisms | 10.3390/microorganisms10112253 | 2022 | |
| Microaerobic Lifestyle at Nanomolar O2 Concentrations Mediated by Low-Affinity Terminal Oxidases in Abundant Soil Bacteria. | Trojan D, Garcia-Robledo E, Meier DV, Hausmann B, Revsbech NP, Eichorst SA, Woebken D. | mSystems | 10.1128/msystems.00250-21 | 2021 | |
| Next generation sequencing data of a defined microbial mock community. | Singer E, Andreopoulos B, Bowers RM, Lee J, Deshpande S, Chiniquy J, Ciobanu D, Klenk HP, Zane M, Daum C, Clum A, Cheng JF, Copeland A, Woyke T. | Sci Data | 10.1038/sdata.2016.81 | 2016 | |
| Discovery and characterization of a novel extremely acidic bacterial N-glycanase with combined advantages of PNGase F and A. | Wang T, Cai ZP, Gu XQ, Ma HY, Du YM, Huang K, Voglmeir J, Liu L. | Biosci Rep | 10.1042/bsr20140148 | 2014 | |
| Pheno- and Genotyping of Hopanoid Production in Acidobacteria. | Damste JSS, Rijpstra WIC, Dedysh SN, Foesel BU, Villanueva L. | Front Microbiol | 10.3389/fmicb.2017.00968 | 2017 | |
| Picodroplet partitioned whole genome amplification of low biomass samples preserves genomic diversity for metagenomic analysis. | Hammond M, Homa F, Andersson-Svahn H, Ettema TJ, Joensson HN. | Microbiome | 10.1186/s40168-016-0197-7 | 2016 | |
| Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria. | Eichorst SA, Breznak JA, Schmidt TM. | Appl Environ Microbiol | 10.1128/aem.02140-06 | 2007 | |
| One Complete and Seven Draft Genome Sequences of Subdivision 1 and 3 Acidobacteria Isolated from Soil. | Eichorst SA, Trojan D, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TBK, Daum C, Goodwin LA, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Woebken D. | Microbiol Resour Announc | 10.1128/mra.01087-19 | 2020 | |
| Genomic insights into the Acidobacteria reveal strategies for their success in terrestrial environments. | Eichorst SA, Trojan D, Roux S, Herbold C, Rattei T, Woebken D. | Environ Microbiol | 10.1111/1462-2920.14043 | 2018 | |
| Acidobacteria are active and abundant members of diverse atmospheric H2-oxidizing communities detected in temperate soils. | Giguere AT, Eichorst SA, Meier DV, Herbold CW, Richter A, Greening C, Woebken D. | ISME J | 10.1038/s41396-020-00750-8 | 2021 | |
| Mining of Microbial Genomes for the Novel Sources of Nitrilases. | Sharma N, Thakur N, Raj T, Savitri, Bhalla TC. | Biomed Res Int | 10.1155/2017/7039245 | 2017 | |
| Microbial community structure analysis in Acer palmatum bark and isolation of novel bacteria IAD-21 of the candidate division FBP. | Kobayashi K, Aoyagi H. | PeerJ | 10.7717/peerj.7876 | 2019 | |
| Influence of plant polymers on the distribution and cultivation of bacteria in the phylum Acidobacteria. | Eichorst SA, Kuske CR, Schmidt TM. | Appl Environ Microbiol | 10.1128/aem.01080-10 | 2011 | |
| Long-Term Warming Alters Carbohydrate Degradation Potential in Temperate Forest Soils. | Pold G, Pold G, Billings AF, Blanchard JL, Burkhardt DB, Frey SD, Melillo JM, Schnabel J, van Diepen LT, DeAngelis KM. | Appl Environ Microbiol | 10.1128/aem.02012-16 | 2016 | |
| Rhodosalinus sediminis gen. nov., sp. nov., isolated from marine saltern. | Guo LY, Ling SK, Li CM, Chen GJ, Du ZJ. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002424 | 2017 | |
| Terriglobus tenax sp. nov., an exopolysaccharide-producing acidobacterium isolated from rhizosphere soil of a medicinal plant. | Whang KS, Lee JC, Lee HR, Han SI, Chung SH | Int J Syst Evol Microbiol | 10.1099/ijs.0.053769-0 | 2013 | |
| Terriglobus aquaticus sp. nov., isolated from an artificial reservoir. | Baik KS, Choi JS, Kwon J, Park SC, Hwang YM, Kim MS, Kim EM, Seo DC, Cho JS, Seong CN | Int J Syst Evol Microbiol | 10.1099/ijs.0.050724-0 | 2013 | |
| Terriglobus saanensis sp. nov., an acidobacterium isolated from tundra soil. | Mannisto MK, Rawat S, Starovoytov V, Haggblom MM | Int J Syst Evol Microbiol | 10.1099/ijs.0.026005-0 | 2010 | |
| Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils. | Koch IH, Gich F, Dunfield PF, Overmann J | Int J Syst Evol Microbiol | 10.1099/ijs.0.65303-0 | 2008 |
| #7520 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18391 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #22970 | Minna K. Männistö, Suman Rawat,Valentin Starovoytov,Max M. Häggblom: Terriglobus saanensis sp. nov., an acidobacterium isolated from tundra soil. IJSEM 61: 1823 - 1828 2011 ( DOI 10.1099/ijs.0.026005-0 , PubMed 21186292 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68369 | Automatically annotated from API 20NE . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive134.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data