Name: Heliimonas saccharivorans L2-4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133996

Type strain:

Species: Heliimonas saccharivorans

Strain Designation: L2-4

Culture col. no.: CECT 8122, LMG 26919

NCBI tax ID(s): 1239958 (species)

SI-ID 379499

LMG 26919, LMG 26920, CECT 8122, CECT 8121

Section

Heliimonas saccharivorans L2-4 is an aerobe, Gram-negative bacterium that was isolated from built environment.

Gram-negative
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Chitinophagia*
	Order	*Chitinophagales*
	Family	*Chitinophagaceae*
	Genus	*Heliimonas*
	Species	**Heliimonas saccharivorans**
	Full Scientific Name (LPSN)	Heliimonas saccharivorans Leandro et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #31023]	Gram stain	negative

[Ref.: #31023]	Motility	no

[Ref.: #31023]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #31023]			growth	10-45 °C
[Ref.: #31023]			optimum	30 °C

[Ref.: #31023]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #31023]			optimum	6.5
[Ref.: #31023]			growth	4.0-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31023]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31023]		NaCl		growth	0-0.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31023]	arabinose ChEBI	+	carbon source
[Ref.: #31023]	cellobiose ChEBI	+	carbon source
[Ref.: #31023]	fructose ChEBI	+	carbon source
[Ref.: #31023]	galactose ChEBI	+	carbon source
[Ref.: #31023]	glucose ChEBI	+	carbon source
[Ref.: #31023]	glycogen ChEBI	+	carbon source
[Ref.: #31023]	lactose ChEBI	+	carbon source
[Ref.: #31023]	maltose ChEBI	+	carbon source
[Ref.: #31023]	mannose ChEBI	+	carbon source
[Ref.: #31023]	melibiose ChEBI	+	carbon source
[Ref.: #31023]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #31023]	raffinose ChEBI	+	carbon source
[Ref.: #31023]	rhamnose ChEBI	+	carbon source
[Ref.: #31023]	sucrose ChEBI	+	carbon source
[Ref.: #31023]	trehalose ChEBI	+	carbon source
[Ref.: #31023]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #31023]	acid phosphatase	+	3.1.3.2
[Ref.: #31023]	alkaline phosphatase	+	3.1.3.1
[Ref.: #31023]	alpha-galactosidase	+	3.2.1.22
[Ref.: #31023]	catalase	+	1.11.1.6
[Ref.: #31023]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31023]	Sample type/isolated from	built environment
* marker position based on {}

Isolation sources categories

#Engineered

#Built environment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX458466 (>99% sequence identity) for Heliimonas saccharivorans subclade from Microbeatlas

Aquatic Samples	1591
Soil Samples	583
Animal Samples	834
Plant Samples	392
Total Samples	3400

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31023]	Heliimonas saccharivorans strain L2-4 16S ribosomal RNA gene, partial sequence	JX458466	1456	GenBank	1239958 tax ID

[Ref.: #31023]

GC-content

42 mol%

Availability in culture collections External links

[Ref.: #31023]

Culture collection no.

CECT 8122, LMG 26919

[Ref.: #91662]

SI-ID 379499

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Haoranjiania flava gen. nov., sp. nov., a new member of the family Chitinophagaceae, isolated from activated sludge.	Zhang L, Chen XL, Hu Q, Chen K, Yan X, Li SP, Freilich S, Jiang JD	Int J Syst Evol Microbiol	10.1099/ijsem.0.001411	2016	*
Phylogeny	Heliimonas saccharivorans gen. nov., sp. nov., a member of the family Chitinophagaceae isolated from a mineral water aquifer, and emended description of Filimonas lacunae.	Leandro T, Franca L, Nobre MF, Rainey FA, da Costa MS	Int J Syst Evol Microbiol	10.1099/ijs.0.050021-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31023

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27353 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91662

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID379499.1 )

#27353

IJSEM 3793 2013 ( DOI 10.1099/ijs.0.050021-0 , PubMed 23667140 )

* These data were automatically processed and therefore are not curated

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