Bradyrhizobium diazoefficiens 3I1B110 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from plant associated.
Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
Last LPSN update
2026-05-29 08:38:13 |
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Hyphomicrobiales |
| Family Nitrobacteraceae |
| Genus Bradyrhizobium |
| Species Bradyrhizobium diazoefficiens |
| Full scientific name Bradyrhizobium diazoefficiens Delamuta et al. 2013 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.556 |
| 30992 | Observationaggregates in clumps |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 30992 | 22599 ChEBI | arabinose | + | carbon source | |
| 30992 | 22653 ChEBI | asparagine | + | carbon source | |
| 30992 | 16947 ChEBI | citrate | + | carbon source | |
| 30992 | 16296 ChEBI | D-tryptophan | + | carbon source | |
| 30992 | 28757 ChEBI | fructose | + | carbon source | |
| 30992 | 33984 ChEBI | fucose | + | carbon source | |
| 30992 | 29987 ChEBI | glutamate | + | carbon source | |
| 30992 | 17754 ChEBI | glycerol | + | carbon source | |
| 30992 | 18403 ChEBI | L-arabitol | + | carbon source | |
| 30992 | 25017 ChEBI | leucine | + | carbon source | |
| 30992 | 29864 ChEBI | mannitol | + | carbon source | |
| 30992 | 37684 ChEBI | mannose | + | carbon source | |
| 30992 | 28044 ChEBI | phenylalanine | + | carbon source | |
| 30992 | 26271 ChEBI | proline | + | carbon source | |
| 30992 | 26546 ChEBI | rhamnose | + | carbon source | |
| 30992 | 33942 ChEBI | ribose | + | carbon source | |
| 30992 | 30911 ChEBI | sorbitol | + | carbon source | |
| 30992 | 26986 ChEBI | threonine | + | carbon source | |
| 30992 | 18222 ChEBI | xylose | + | carbon source |
Global distribution of 16S sequence AF363150 (>99% sequence identity) for Bradyrhizobium from Microbeatlas 
 Aquatic Samples |
2827 |
 Soil Samples |
5001 |
 Animal Samples |
4320 |
 Plant Samples |
739 |
| Total Samples | 12887 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM164267v1 assembly for Bradyrhizobium diazoefficiens USDA 110 | complete | GCA_001642675   | 2687453391  | 224911 | 99.31 | ||
| 67770 | ASM1136v1 assembly for Bradyrhizobium diazoefficiens USDA 110 USDA110 | complete | GCA_000011365 | 224911.5  | 637000038 | 224911 | 98.96 | |
| 124043 | ASM4126112v1 assembly for Bradyrhizobium diazoefficiens USDA 110 | contig | GCA_041261125 | 2954480847 | 1355477 | 51.4 |  |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 67770 | Bradyrhizobium diazoefficiens USDA 110 gene for 16S ribosomal RNA, partial sequence | AB909430 | 1313 | | 224911 | |
| 67770 | Bradyrhizobium japonicum strain USDA 110 16S ribosomal RNA gene, partial sequence | AF363150 | 1321 | | 224911 | |
| 67770 | Bradyrhizobium japonicum (strain USDA 110) gene for 16S ribosomal RNA | D13430 | 1457 | | 224911 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Pleiotropic Effects of PhaR Regulator in Bradyrhizobium diazoefficiens Microaerobic Metabolism. | Quelas JI, Cabrera JJ, Diaz-Pena R, Sanchez-Schneider L, Jimenez-Leiva A, Tortosa G, Delgado MJ, Pettinari MJ, Lodeiro AR, Del Val C, Mesa S. | Int J Mol Sci | 10.3390/ijms25042157 | 2024 | | |
| Molecular characterization of heavy metal-tolerant bacteria and their potential for bioremediation and plant growth promotion. | Abbas S, Zulfiqar S, Arshad M, Khalid N, Hussain A, Ahmed I. | Front Microbiol | 10.3389/fmicb.2025.1644466 | 2025 | | |
| Exploring Proteins Containing Amyloidogenic Regions in the Proteomes of Bacteria of the Order Rhizobiales. | Antonets KS, Kliver SF, Nizhnikov AA. | Evol Bioinform Online | 10.1177/1176934318768781 | 2018 | | |
| Metabolism | luxR Homolog-Linked Biosynthetic Gene Clusters in Proteobacteria. | Brotherton CA, Medema MH, Greenberg EP. | mSystems | 10.1128/msystems.00208-17 | 2018 | |
| High Salt Tolerance of a Bradyrhizobium Strain and Its Promotion of the Growth of Stylosanthes guianensis. | Dong R, Zhang J, Huan H, Bai C, Chen Z, Liu G. | Int J Mol Sci | 10.3390/ijms18081625 | 2017 | | |
| The OxyR and SoxR transcriptional regulators are involved in a broad oxidative stress response in Paraburkholderia xenovorans LB400. | Mendez V, Rodriguez-Castro L, Duran RE, Padron G, Seeger M. | Biol Res | 10.1186/s40659-022-00373-7 | 2022 | | |
| Genetics | Analysis of the complete genome sequence of Bradyrhizobium diazoefficiens 172S4, a highly efficient nitrogen-fixing symbiont of soybeans, reveals large-scale genomic inversion. | Bromfield ESP, Cloutier S. | Microbiol Resour Announc | 10.1128/mra.00889-25 | 2025 | |
| Transcriptional Dynamics of Nitrogen Fixation and Senescence in Soybean Nodules: A Dual Perspective on Host and Bradyrhizobium Regulation. | DelPercio R, McGregor M, Morley S, Nikaeen N, Meyers B, Baldrich P. | Mol Plant Microbe Interact | 10.1094/mpmi-04-25-0037-r | 2025 | | |
| Repeated artificial mutagenesis of Bradyrhizobium diazoefficiens by gamma irradiation accelerates the acquisition of high-temperature tolerance. | Hase Y, Nagafune I, Satoh K. | Mutat Res | 10.1016/j.mrfmmm.2025.111919 | 2025 | | |
| PMA-qPCA: Accelerating the market release of high-quality Bradyrhizobium diazoefficiens inoculant. | Cap M, Frydman C, Galinanes A, Aranguiz C, Faraco I, Andriolo L, Parreno V, Mozgovoj M. | PLoS One | 10.1371/journal.pone.0325878 | 2025 | | |
| XoxF and the Calvin-Benson cycle mediate lanthanide-dependent growth on methanol in Bradyrhizobium and Sinorhizobium. | Mineo CR, Jiang J, Martinez-Gomez NC. | Appl Environ Microbiol | 10.1128/aem.01304-25 | 2025 | | |
| Enzymology | Dual Oxygen-Responsive Control by RegSR of Nitric Oxide Reduction in the Soybean Endosymbiont Bradyrhizobium diazoefficiens. | Jimenez-Leiva A, Juarez-Martos RA, Cabrera JJ, Torres MJ, Mesa S, Delgado MJ. | Antioxid Redox Signal | 10.1089/ars.2024.0710 | 2025 | |
| Haem is involved in the NO-mediated regulation by Bradyrhizobium diazoefficiens NnrR transcription factor. | Jimenez-Leiva A, Cabrera JJ, Torres MJ, Richardson DJ, Bedmar EJ, Gates AJ, Delgado MJ, Mesa S. | Microbiol Res | 10.1016/j.micres.2025.128151 | 2025 | | |
| Effects of Flooding-induced Changes in Bradyrhizobia Occupancy on the Growth of Adzuki Bean (Vigna angularis). | Shiro S, Takei S. | Microbes Environ | 10.1264/jsme2.me25041 | 2025 | | |
| Genetic Characterization and Symbiotic Performance of Soybean Rhizobia Under Cold and Water-Deficient Conditions in Poland. | Watanabe R, Artigas Ramirez MD, Agake SI, Bellingrath-Kimura SD, Lewandowska S, Onishi Y, Nishikawa Y, Takeyama H, Yasuda M, Ohkama-Ohtsu N. | Plants (Basel) | 10.3390/plants14121786 | 2025 | | |
| Self-growth suppression in Bradyrhizobium diazoefficiens is caused by a diffusible antagonist. | Sandhu AK, Fischer BR, Subramanian S, Hoppe AD, Brozel VS. | ISME Commun | 10.1093/ismeco/ycaf032 | 2025 | | |
| Tripartite microbial augmentation of Bradyrhizobium diazoefficiens, Bacillus sp. MN54, and Piriformospora indica on growth, yield, and nutrient profiling of soybean (Glycine max L.). | Rafique M, Naveed M, Mumtaz MZ, Niaz A, Alamri S, Rehman SU, Siddiqui MH, Mustafa A. | Front Microbiol | 10.3389/fmicb.2024.1437489 | 2024 | | |
| Bacillus velezensis S141 improves the root growth of soybean under drought conditions. | Kondo T, Sibponkrung S, Tittabutr P, Boonkerd N, Ishikawa S, Teaumroong N, Yoshida KI. | Biosci Biotechnol Biochem | 10.1093/bbb/zbae168 | 2025 | | |
| Effect of sulfur- and zinc-containing fertilizers on soybean yield and analysis of spatial and seasonal yield variability in Ghana, West Africa | Kouame AKK, Bindraban PS, Jallal L, Kwesie B, Anokye ANAF, El Allali A, Adzawla W. | European journal of agronomy : the journal of the European Society for Agronomy. | 2025 | | ||
| Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase Is Required in Bradyrhizobium diazoefficiens for Efficient Soybean Root Colonization and Competition for Nodulation. | Balda RS, Cogo C, Falduti O, Bongiorno FM, Brignoli D, Sandobal TJ, Althabegoiti MJ, Lodeiro AR. | Plants (Basel) | 10.3390/plants13172362 | 2024 | | |
| Bradyrhizobium diazoefficiens cultures display phenotypic heterogeneity. | Sarao SK, Sandhu AK, Hanson RL, Govil T, Brozel VS. | ISME Commun | 10.1093/ismeco/ycaf054 | 2025 | | |
| Soil-mimicking microfluidic devices reveal restricted flagellar motility of Bradyrhizobium diazoefficiens under microconfinement. | Monteiro MP, Carrillo-Mora JP, Gutierrez N, Montagna S, Lodeiro AR, Cordero ML, Marconi VI. | Commun Biol | 10.1038/s42003-025-07811-8 | 2025 | | |
| Convergent gene pair dSH3 and irr regulate Pi and Fe homeostasis in Bradyrhizobium diazoefficiens USDA110 and symbiotic nitrogen fixation efficiency. | Jin Y, Liu Y, Liu S, Wang E, Chen W. | Microbiol Res | 10.1016/j.micres.2023.127571 | 2024 | | |
| Identification of efficient amine transaminase and applicability in dual transaminases cascade for synthesis of L-phosphinothricin. | Yi P, Liu M, Hao Y, Wang Z, Liu H, Cai X, Cheng F, Liu Z, Xue Y, Jin L, Zheng Y. | Enzyme Microb Technol | 10.1016/j.enzmictec.2024.110501 | 2024 | | |
| Differential symbiotic compatibilities between rhizobium strains and cultivated and wild soybeans revealed by anatomical and transcriptome analyses. | Zadegan SB, Kim W, Abbas HMK, Kim S, Krishnan HB, Hewezi T. | Front Plant Sci | 10.3389/fpls.2024.1435632 | 2024 | | |
| Co-Inoculation of Trichoderma harzianum and Bradyrhizobium Species Augment the Growth of Schizolobium parahyba var. parahyba (Vell.) Blake Seedlings. | Ferreira NCF, Gatto A, Ramos MLG. | Microorganisms | 10.3390/microorganisms13030630 | 2025 | | |
| Biohydrogen utilization in legume-rhizobium symbiosis reveals a novel mechanism of accelerated tetrachlorobiphenyl transformation. | Xu Y, Teng Y, Wang X, Wang H, Li Y, Ren W, Zhao L, Wei M, Luo Y. | Bioresour Technol | 10.1016/j.biortech.2024.130918 | 2024 | | |
| Metabolism | A genome-scale metabolic reconstruction of soybean and Bradyrhizobium diazoefficiens reveals the cost-benefit of nitrogen fixation. | Holland BL, Matthews ML, Bota P, Sweetlove LJ, Long SP, diCenzo GC. | New Phytol | 10.1111/nph.19203 | 2023 | |
| De Novo Synthesis of Resveratrol from Sucrose by Metabolically Engineered Yarrowia lipolytica. | Ibrahim GG, Perera M, Abdulmalek SA, Yan J, Yan Y. | Biomolecules | 10.3390/biom14060712 | 2024 | | |
| Impact of Inoculations with Indigenous Bradyrhizobium diazoefficiens Isolates on Productivity and Competition with Indigenous Bradyrhizobia in Adzuki Bean (Vigna angularis). | Shiro S, Makihara R, Nakao S, Kadowaki M, Saeki Y. | Microbes Environ | 10.1264/jsme2.me24069 | 2025 | | |
| Genetics | Isolation and Characterization of High-Temperature-Tolerant Mutants of Bradyrhizobium diazoefficiens USDA110 by Carbon-Ion Beam Irradiation. | Satoh K, Takeda K, Nagafune I, Chik WDW, Ohkama-Otsu N, Okazaki S, Yokoyama T, Hase Y. | Microorganisms | 10.3390/microorganisms12091819 | 2024 | |
| Surface Plasmon Resonance as a Tool to Elucidate the Molecular Determinants of Key Transcriptional Regulators Controlling Rhizobial Lifestyles. | Tomas-Gallardo L, Cabrera JJ, Mesa S. | Methods Mol Biol | 10.1007/978-1-0716-3617-6_10 | 2024 | | |
| Soybean-mediated suppression of BjaI/BjaR1 quorum sensing in Bradyrhizobium diazoefficiens impacts symbiotic nitrogen fixation. | Han F, Li H, Lyu E, Zhang Q, Gai H, Xu Y, Bai X, He X, Khan AQ, Li X, Xie F, Li F, Fang X, Wei M. | Appl Environ Microbiol | 10.1128/aem.01374-23 | 2024 | | |
| Improved rapid and efficient hairy root transformation using Rhizobium rhizogenes in legume crops. | Araragi M, Songwattana P, Teaumroong N, Masuda S, Shibata A, Shirasu K, Kawaharada Y. | Plant Biotechnol (Tokyo) | 10.5511/plantbiotechnology.25.0213a | 2025 | | |
| Mixed Enterobacter and Klebsiella bacteria enhance soybean biological nitrogen fixation ability when combined with rhizobia inoculation | Zhang Y, Xu Q, Wang G, Shi K. | Soil Biol Biochem | 2023 | | ||
| Comparative Analysis Reveals Host Species-Dependent Diversity Among 16 Virulent Bacteriophages Isolated Against Soybean Bradyrhizobium spp. | Morgese EA, Ferrell BD, Toth SC, Polson SW, Wommack KE, Fuhrmann JJ. | Viruses | 10.3390/v17111474 | 2025 | | |
| Phenotype | Bradyrhizobium diazoefficiens USDA 110 displays plasticity in the attachment phenotype when grown in different soybean root exudate compounds. | Sandhu AK, Brown MR, Subramanian S, Brozel VS. | Front Microbiol | 10.3389/fmicb.2023.1190396 | 2023 | |
| Use of high throughput DNA analysis to characterize the nodule-associated bacterial community from four ages of Inga punctata trees in a Costa Rican cloud forest. | Eaton WD, Hamilton DA, Chen W, Lemenze A, Soteropoulos P. | AIMS Microbiol | 10.3934/microbiol.2024027 | 2024 | | |
| Chemodiversity of soil organic matters determines biodegradation of polychlorinated biphenyls by a graphene oxide-assisted bacterial agent. | Li R, Teng Y, Sun Y, Xu Y, Wang Z, Wang X, Hu W, Ren W, Zhao L, Luo Y. | J Hazard Mater | 10.1016/j.jhazmat.2023.131015 | 2023 | | |
| Salt- and Osmo-Responsive Sensor Histidine Kinases Activate the Bradyrhizobium diazoefficiens General Stress Response to Initiate Functional Symbiosis. | Wulser J, Ernst C, Vetsch D, Emmenegger B, Michel A, Lutz S, Ahrens CH, Vorholt JA, Ledermann R, Fischer HM. | Mol Plant Microbe Interact | 10.1094/mpmi-02-22-0051-fi | 2022 | | |
| Hopanoid lipids promote soybean-Bradyrhizobium symbiosis. | Pan H, Shim A, Lubin MB, Belin BJ. | mBio | 10.1128/mbio.02478-23 | 2024 | | |
| OpDetect: A convolutional and recurrent neural network classifier for precise and sensitive operon detection from RNA-seq data. | Karaji R, Pena-Castillo L. | PLoS One | 10.1371/journal.pone.0329355 | 2025 | | |
| Drought Stress Modifies the Source-Sink Dynamics of Nitrogen-Fixing Soybean Plants Prioritizing Roots and Nodules. | Rubia MI, Larrainzar E, Arrese-Igor C. | Physiol Plant | 10.1111/ppl.70276 | 2025 | | |
| Genetics | Diverse bacterial consortia: key drivers of rhizosoil fertility modulating microbiome functions, plant physiology, nutrition, and soybean grain yield. | Moretti LG, Crusciol CAC, Leite MFA, Momesso L, Bossolani JW, Costa OYA, Hungria M, Kuramae EE. | Environ Microbiome | 10.1186/s40793-024-00595-0 | 2024 | |
| Legume-specific recruitment of rhizobia by hyphae of arbuscular mycorrhizal fungi. | He J, Van Dingenen J, Goormachtig S, Calonne-Salmon M, Declerck S. | ISME J | 10.1093/ismejo/wraf100 | 2025 | | |
| Identification and characterization of L-type lectin receptor-like kinases involved in Glycine max-Phytophthora sojae interaction. | Zeng M, Wan B, Wang L, Chen Z, Lin Y, Ye W, Wang Y, Wang Y. | Planta | 10.1007/s00425-021-03789-9 | 2021 | | |
| Developing a genomic-based strategy to confirm microbial identity in bio-inputs containing multiple strains: an easy, fast, and low-cost multiplex PCR applied to inoculants carrying soybean Bradyrhizobium. | de Paiva Rolla-Santos AA, Terra LA, Ribeiro RA, Nogueira MA, Hungria M. | Braz J Microbiol | 10.1007/s42770-024-01441-8 | 2024 | | |
| Enzymology | The copper-responsive regulator CsoR is indirectly involved in Bradyrhizobium diazoefficiens denitrification. | Pacheco PJ, Cabrera JJ, Jimenez-Leiva A, Torres MJ, Gates AJ, Bedmar EJ, Richardson DJ, Mesa S, Tortosa G, Delgado MJ. | FEMS Microbiol Lett | 10.1093/femsle/fnad084 | 2023 | |
| Transcriptome | Independent Component Analysis Reveals the Transcriptional Regulatory Modules in Bradyrhizobium diazoefficiens USDA110. | Gao ZP, Gu WC, Li J, Qiu QT, Ma BG. | Int J Mol Sci | 10.3390/ijms241612544 | 2023 | |
| Dissection of FixK2 protein-DNA interaction unveils new insights into Bradyrhizobium diazoefficiens lifestyles control. | Cabrera JJ, Jimenez-Leiva A, Tomas-Gallardo L, Parejo S, Casado S, Torres MJ, Bedmar EJ, Delgado MJ, Mesa S. | Environ Microbiol | 10.1111/1462-2920.15661 | 2021 | | |
| Rhizosphere frame system enables nondestructive live-imaging of legume-rhizobium interactions in the soil. | Nishida H, Shimoda Y, Win KT, Imaizumi-Anraku H. | J Plant Res | 10.1007/s10265-023-01476-2 | 2023 | | |
| Genetics | Deciphering the sequence basis and application of transcriptional initiation regulation in plant genomes through deep learning. | Gao P, Lian L, Feng W, Ma Y, Lin J, Qin L, Hao S, Zhao H, Liu X, Yuan J, Lin Z, Li X, Guan Y, Wang X. | Genome Biol | 10.1186/s13059-025-03782-5 | 2025 | |
| Sinorhizobium meliloti GR4 Produces Chromosomal- and pSymA-Encoded Type IVc Pili That Influence the Interaction with Alfalfa Plants. | Carvia-Hermoso C, Cuellar V, Bernabeu-Roda LM, van Dillewijn P, Soto MJ. | Plants (Basel) | 10.3390/plants13050628 | 2024 | | |
| Maximizing Photosynthesis and Plant Growth in African Legumes Through Rhizobial Partnerships: The Road Behind and Ahead. | Jaiswal SK, Dakora FD. | Microorganisms | 10.3390/microorganisms13030581 | 2025 | | |
| Whispers beneath the soil: soybean-microbe communication pathways in the rhizosphere. | Cheng SS, Contador CA, Zhang F, Ho YL, Lam HM. | Front Plant Sci | 10.3389/fpls.2025.1686819 | 2025 | | |
| Both incompatible and compatible rhizobia inhabit the intercellular spaces of leguminous root nodules. | Hata S, Tsuda R, Kojima S, Tanaka A, Kouchi H. | Plant Signal Behav | 10.1080/15592324.2023.2245995 | 2023 | | |
| Biogeographic pattern and relevant environmental factors for rhizobial communities in the rhizosphere and root nodules of kudzu (Pueraria lobata). | Liu L, Jiang H, Zhang X, Peng D. | Environ Sci Pollut Res Int | 10.1007/s11356-022-19335-3 | 2022 | | |
| Taxonomic and functional analysis of soil microbial communities in a mining site across a metal(loid) contamination gradient | Navas M, Perez-Esteban J, Torres M, Hontoria C, Moliner A. | European Journal of Soil Science. | 10.1111/ejss.12979 | 2021 | | |
| Co-inoculation of Rhizobium and Bradyrhizobium promotes growth and yield of common beans | Leite RdA, Martins LC, Ferreira LVdSF, Barbosa ES, Alves BJR, Zilli JE, Araujo AP, Jesus EdC. | Appl Soil Ecol | 10.1016/j.apsoil.2021.104356 | 2022 | | |
| Spatiotemporal changes in gibberellin content are required for soybean nodulation. | Chu X, Su H, Hayashi S, Gresshoff PM, Ferguson BJ. | New Phytol | 10.1111/nph.17902 | 2022 | | |
| A Stringent-Response-Defective Bradyrhizobium diazoefficiens Strain Does Not Activate the Type 3 Secretion System, Elicits an Early Plant Defense Response, and Circumvents NH4NO3-Induced Inhibition of Nodulation. | Perez-Gimenez J, Iturralde ET, Torres Tejerizo G, Quelas JI, Krol E, Borassi C, Becker A, Estevez JM, Lodeiro AR. | Appl Environ Microbiol | 10.1128/aem.02989-20 | 2021 | | |
| Effect of graphene on soybean root colonization by Bradyrhizobium strains. | Sethu Madhavan A, Montanez Hernandez LE, Gu ZR, Subramanian S. | Plant Direct | 10.1002/pld3.522 | 2023 | | |
| Metabolism | Levels of Periplasmic Nitrate Reductase during Denitrification are Lower in Bradyrhizobium japonicum than in Bradyrhizobium diazoefficiens. | Siqueira AF, Sugawara M, Arashida H, Minamisawa K, Sanchez C. | Microbes Environ | 10.1264/jsme2.me19129 | 2020 | |
| Genetics | Comparative genomic analysis of Bradyrhizobium strains with natural variability in the efficiency of nitrogen fixation, competitiveness, and adaptation to stressful edaphoclimatic conditions. | Klepa MS, diCenzo GC, Hungria M. | Microbiol Spectr | 10.1128/spectrum.00260-24 | 2024 | |
| Genetics | Adaptability to local conditions and phylogenetic differentiation of microsymbionts of TGx soybean genotypes in the semi-arid environments of Ghana and South Africa. | Ayuba J, Jaiswal SK, Mohammed M, Denwar NN, Dakora FD. | Syst Appl Microbiol | 10.1016/j.syapm.2021.126264 | 2021 | |
| Metabolism | Dual Control of Flagellar Synthesis and Exopolysaccharide Production by FlbD-FliX Class II Regulatory Proteins in Bradyrhizobium diazoefficiens. | Dardis C, Quelas JI, Mengucci F, Althabegoiti MJ, Lodeiro AR, Mongiardini EJ. | J Bacteriol | 10.1128/jb.00403-20 | 2021 | |
| Physical Properties of Carbon Nanomaterials and Nanoceria Affect Pathways Important to the Nodulation Competitiveness of the Symbiotic N2 -Fixing Bacterium Bradyrhizobium diazoefficiens. | Mortimer M, Li D, Wang Y, Holden PA. | Small | 10.1002/smll.201906055 | 2020 | | |
| Overexpression of GmPAP4 Enhances Symbiotic Nitrogen Fixation and Seed Yield in Soybean under Phosphorus-Deficient Condition. | Sun X, Zhang H, Yang Z, Xing X, Fu Z, Li X, Kong Y, Li W, Du H, Zhang C. | Int J Mol Sci | 10.3390/ijms25073649 | 2024 | | |
| De Novo Synthesis of Resveratrol from Sucrose by Metabolically Engineered Yarrowia lipolytica | Ibrahim G, Perera M, Abdulmalek S, Yan J, Yan Y. | Biomolecules | 2024 | | ||
| Beneficial microbial species and metabolites alleviate soybean oxidative damage and increase grain yield during short dry spells | Moretti LG, Crusciol CAC, Bossolani JW, Calonego JC, Moreira A, Garcia A, Momesso L, Kuramae EE, Hungria M. | European journal of agronomy : the journal of the European Society for Agronomy. | 10.1016/j.eja.2021.126293 | 2021 | | |
| GmSPX8, a nodule-localized regulator confers nodule development and nitrogen fixation under phosphorus starvation in soybean. | Xing X, Du H, Yang Z, Li X, Kong Y, Li W, Zhang C. | BMC Plant Biol | 10.1186/s12870-022-03556-2 | 2022 | | |
| Genetic diversity and distribution of rhizobia associated with soybean in red soil in Hunan Province. | Liu L, Chen X, Hu S, Zhan Q, Peng W. | Arch Microbiol | 10.1007/s00203-020-02120-6 | 2021 | | |
| Metabolism | Characterization of FliL Proteins in Bradyrhizobium diazoefficiens: Lateral FliL Supports Swimming Motility, and Subpolar FliL Modulates the Lateral Flagellar System. | Mengucci F, Dardis C, Mongiardini EJ, Althabegoiti MJ, Partridge JD, Kojima S, Homma M, Quelas JI, Lodeiro AR. | J Bacteriol | 10.1128/jb.00708-19 | 2020 | |
| Identification and Validation of Reference Genes for Expression Analysis in Nitrogen-Fixing Bacteria under Environmental Stress. | Parks D, Peterson C, Chang WS. | Life (Basel) | 10.3390/life12091379 | 2022 | | |
| The Hemoglobin Bjgb From Bradyrhizobium diazoefficiens Controls NO Homeostasis in Soybean Nodules to Protect Symbiotic Nitrogen Fixation. | Salas A, Tortosa G, Hidalgo-Garcia A, Delgado A, Bedmar EJ, Richardson DJ, Gates AJ, Delgado MJ. | Front Microbiol | 10.3389/fmicb.2019.02915 | 2019 | | |
| Metabolism | Regulation of the Emissions of the Greenhouse Gas Nitrous Oxide by the Soybean Endosymbiont Bradyrhizobium diazoefficiens. | Bueno E, Mania D, Mesa S, Bedmar EJ, Frostegard A, Bakken LR, Delgado MJ. | Int J Mol Sci | 10.3390/ijms23031486 | 2022 | |
| A microaerobically induced small heat shock protein contributes to Rhizobium leguminosarum/Pisum sativum symbiosis and interacts with a wide range of bacteroid proteins. | Domingo-Serrano L, Sanchis-Lopez C, Alejandre C, Soldek J, Palacios JM, Albareda M. | Appl Environ Microbiol | 10.1128/aem.01385-24 | 2025 | | |
| Production of the plant hormone gibberellin by rhizobia increases host legume nodule size. | Nett RS, Bender KS, Peters RJ. | ISME J | 10.1038/s41396-022-01236-5 | 2022 | | |
| Nitrilase GiNIT from Gibberella intermedia Efficiently Degrades Nitriles Derived from Rapeseed Meal Glucosinolate. | Li HZ, Liu MY, Wang YY, Luo XM, Feng JX, Zhao S. | Int J Mol Sci | 10.3390/ijms252211986 | 2024 | | |
| Exploring a novel beta-1,3-glucanosyltransglycosylase, MlGH17B, from a marine Muricauda lutaonensis strain for modification of laminari-oligosaccharides. | Allahgholi L, Derks MGN, Dobruchowska JM, Jasilionis A, Moenaert A, Jouy L, Ara KZG, Linares-Pasten JA, Fridjonsson OH, Hreggvidsson GO, Karlsson EN. | Glycobiology | 10.1093/glycob/cwae007 | 2024 | | |
| Identification and functional analysis of recent IS transposition events in rhizobia. | Mogro EG, Draghi WO, Lagares A, Lozano MJ. | Mob DNA | 10.1186/s13100-024-00327-8 | 2024 | | |
| Bacterial Isolation from Natural Grassland on Nitrogen-Free Agar Yields Many Strains Without Nitrogenase. | Koirala A, Alshibli NA, Das BK, Brozel VS. | Microorganisms | 10.3390/microorganisms13010096 | 2025 | | |
| Metabolism | Identification of Genes Regulated by the Antitermination Factor NasT during Denitrification in Bradyrhizobium diazoefficiens. | Sanchez C, Siqueira AF, Mitsui H, Minamisawa K. | Microbes Environ | 10.1264/jsme2.me19033 | 2019 | |
| Microbial Enhancement of Plant Tolerance to Waterlogging: Mechanisms and Interplay with Biological Control of Pathogens | Maciag T, Krzyzanowska D. | Int J Mol Sci | 2025 | | ||
| Hopanoids Confer Robustness to Physicochemical Variability in the Niche of the Plant Symbiont Bradyrhizobium diazoefficiens. | Tookmanian E, Junghans L, Kulkarni G, Ledermann R, Saenz J, Newman DK. | J Bacteriol | 10.1128/jb.00442-21 | 2022 | | |
| Symbiotic incompatibility between soybean and Bradyrhizobium arises from one amino acid determinant in soybean Rj2 protein. | Sugawara M, Umehara Y, Kaga A, Hayashi M, Ishimoto M, Sato S, Mitsui H, Minamisawa K. | PLoS One | 10.1371/journal.pone.0222469 | 2019 | | |
| A Functional General Stress Response of Bradyrhizobium diazoefficiens Is Required for Early Stages of Host Plant Infection. | Ledermann R, Bartsch I, Muller B, Wulser J, Fischer HM. | Mol Plant Microbe Interact | 10.1094/mpmi-11-17-0284-r | 2018 | | |
| Enzymology | Effect of Copper on Expression of Functional Genes and Proteins Associated with Bradyrhizobium diazoefficiens Denitrification. | Pacheco PJ, Cabrera JJ, Jimenez-Leiva A, Bedmar EJ, Mesa S, Tortosa G, Delgado MJ. | Int J Mol Sci | 10.3390/ijms23063386 | 2022 | |
| Spontaneously Produced Lysogenic Phages Are an Important Component of the Soybean Bradyrhizobium Mobilome. | Joglekar P, Ferrell BD, Jarvis T, Haramoto K, Place N, Dums JT, Polson SW, Wommack KE, Fuhrmann JJ. | mBio | 10.1128/mbio.00295-23 | 2023 | | |
| Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication. | Arashida H, Odake H, Sugawara M, Noda R, Kakizaki K, Ohkubo S, Mitsui H, Sato S, Minamisawa K. | ISME J | 10.1038/s41396-021-01035-4 | 2022 | | |
| A procedure for removal of cyanuric acid in swimming pools using a cell-free thermostable cyanuric acid hydrolase. | Guo F, McAuliffe JC, Bongiorni C, Latone JA, Pepsin MJ, Chow MS, Dhaliwal RS, Hoffmann KM, Brazil BT, Heng MH, Robinson SL, Wackett LP, Whited GM. | J Ind Microbiol Biotechnol | 10.1093/jimb/kuab084 | 2022 | | |
| Nitrogen has a greater influence than phosphorus on the diazotrophic community in two successive crop seasons in Northeast China. | Zhou J, Ma M, Guan D, Jiang X, Zhang N, Shu F, Kong Y, Li J. | Sci Rep | 10.1038/s41598-021-85829-8 | 2021 | | |
| Enzymology | Regulation of nitrous oxide reductase genes by NasT-mediated transcription antitermination in Bradyrhizobium diazoefficiens. | Sanchez C, Mitsui H, Minamisawa K. | Environ Microbiol Rep | 10.1111/1758-2229.12543 | 2017 | |
| Hypernodulating soybean mutant line nod4 lacking 'Autoregulation of Nodulation' (AON) has limited root-to-shoot water transport capacity. | Caroline Silva Lopes E, Pereira Rodrigues W, Ruas Fraga K, Machado Filho JA, Rangel da Silva J, Menezes de Assis-Gomes M, Moura Assis Figueiredo FAM, Gresshoff PM, Campostrini E. | Ann Bot | 10.1093/aob/mcz040 | 2019 | | |
| Genetics | Closed genomes of commercial inoculant rhizobia provide a blueprint for management of legume inoculation. | Kohlmeier MG, O'Hara GW, Ramsay JP, Terpolilli JJ. | Appl Environ Microbiol | 10.1128/aem.02213-24 | 2025 | |
| Rhizobial Chemotaxis and Motility Systems at Work in the Soil. | Aroney STN, Poole PS, Sanchez-Canizares C. | Front Plant Sci | 10.3389/fpls.2021.725338 | 2021 | | |
| Growth-promoting effects of Bradyrhizobium soybean symbionts in black oats, white oats, and ryegrass. | de Castilho CL, Volpiano CG, Ambrosini A, Zulpo L, Passaglia L, Beneduzi A, de Sa ELS. | Braz J Microbiol | 10.1007/s42770-021-00523-1 | 2021 | | |
| Metabolism | Nitrogen Assimilation and Transport by Ex Planta Nitrogen-Fixing Bradyrhizobium diazoefficiens Bacteroids Is Modulated by Oxygen, Bacteroid Density and l-Malate. | Waters JK, Mawhinney TP, Emerich DW. | Int J Mol Sci | 10.3390/ijms21207542 | 2020 | |
| Phylogeny | Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica. | Epova EY, Shevelev AB, Akbayev RM, Biryukova YK, Zylkova MV, Bogdanova ES, Guseva MA, Tynio YY, Egorov VV. | Int J Environ Res Public Health | 10.3390/ijerph19074025 | 2022 | |
| Genetics | Unraveling nitrogen metabolism, cold and stress adaptation in polar Bosea sp. PAMC26642 through comparative genome analysis. | Khanal A, Han SR, Lee JH, Oh TJ. | Front Microbiol | 10.3389/fmicb.2024.1505699 | 2024 | |
| Soybean nodulation shapes the rhizosphere microbiome to increase rapeseed yield. | Liu Y, Han Q, Zhang J, Zhang X, Chen Y, Li M, Hao Y, Hong Y, Tang R, Ferguson BJ, Gresshoff PM, Kuai J, Zhou G, Li X, Ji H. | J Adv Res | 10.1016/j.jare.2024.11.034 | 2025 | | |
| Genetic variation in symbiotic islands of natural variant strains of soybean Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens differing in competitiveness and in the efficiency of nitrogen fixation. | Bender FR, Nagamatsu ST, Delamuta JRM, Ribeiro RA, Nogueira MA, Hungria M. | Microb Genom | 10.1099/mgen.0.000795 | 2022 | | |
| Fine-Tuning Modulation of Oxidation-Mediated Posttranslational Control of Bradyrhizobium diazoefficiens FixK2 Transcription Factor. | Parejo S, Cabrera JJ, Jimenez-Leiva A, Tomas-Gallardo L, Bedmar EJ, Gates AJ, Mesa S. | Int J Mol Sci | 10.3390/ijms23095117 | 2022 | | |
| Pathogenicity | Isolation and Identification of Salinity-Tolerant Rhizobia and Nodulation Phenotype Analysis in Different Soybean Germplasms. | Yu T, Wu X, Song Y, Lv H, Zhang G, Tang W, Zheng Z, Wang X, Gu Y, Zhou X, Li J, Tian S, Hou X, Chen Q, Xin D, Ni H. | Curr Issues Mol Biol | 10.3390/cimb46040209 | 2024 | |
| Genetics | Environmental stress leads to genome streamlining in a widely distributed species of soil bacteria. | Simonsen AK. | ISME J | 10.1038/s41396-021-01082-x | 2022 | |
| RhizoBindingSites v2.0 Is a Bioinformatic Database of DNA Motifs Potentially Involved in Transcriptional Regulation Deduced From Their Genomic Sites. | Taboada-Castro H, Hernandez-Alvarez AJ, Castro-Mondragon JA, Encarnacion-Guevara S. | Bioinform Biol Insights | 10.1177/11779322241272395 | 2024 | | |
| Metabolism | Dissecting the role of NtrC and RpoN in the expression of assimilatory nitrate and nitrite reductases in Bradyrhizobium diazoefficiens. | Lopez MF, Cabrera JJ, Salas A, Delgado MJ, Lopez-Garcia SL. | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0821-3 | 2017 | |
| Complete Genome Sequence of Bradyrhizobium diazoefficiens USDA 122, a Nitrogen-Fixing Soybean Symbiont. | Sugawara M, Tsukui T, Kaneko T, Ohtsubo Y, Sato S, Nagata Y, Tsuda M, Mitsui H, Minamisawa K. | Genome Announc | 10.1128/genomea.01743-16 | 2017 | | |
| Omics-based identification of the broader effects of 2-hydroxyisoflavanone synthase gene editing on a gene regulatory network beyond isoflavonoid loss in soybean hairy roots. | Uchida K, Fuji Y, Tabeta H, Akashi T, Hirai MY. | Plant Cell Physiol | 10.1093/pcp/pcae151 | 2025 | | |
| Physical mechanism reveals bacterial slowdown above a critical number of flagella. | Tatulea-Codrean M, Lauga E. | J R Soc Interface | 10.1098/rsif.2024.0283 | 2024 | | |
| Phylogeny | Diversity of Phosphorus-Solubilizing Microbes Isolated From Different Cropping Systems of Zimbabwe for Use as Biofertilizers With Rock Phosphate. | Kanonge G, Chiduwa MS, Muchaonyerwa P. | Microbiologyopen | 10.1002/mbo3.70065 | 2025 | |
| Nodule-associated diazotrophic community succession is driven by developmental phases combined with microhabitat of Sophora davidii. | Ai J, Yu T, Liu X, Jiang Y, Hao Z, Zhao X, Wang E, Deng Z. | Front Microbiol | 10.3389/fmicb.2022.1078208 | 2022 | | |
| Noncanonical transcription initiation is primarily tissue specific and epigenetically tuned in paleopolyploid plants. | Wang X, Duan J, Clark CB, Feng W, Ma J. | Plant Cell | 10.1093/plcell/koae288 | 2024 | | |
| Metabolism of Aldoximes and Nitriles in Plant-Associated Bacteria and Its Potential in Plant-Bacteria Interactions. | Radisch R, Patek M, Kristkova B, Winkler M, Kren V, Martinkova L. | Microorganisms | 10.3390/microorganisms10030549 | 2022 | | |
| Transcriptomic Characterization of Bradyrhizobium diazoefficiens Bacteroids Reveals a Post-Symbiotic, Hemibiotrophic-Like Lifestyle of the Bacteria within Senescing Soybean Nodules. | Franck S, Strodtman KN, Qiu J, Emerich DW. | Int J Mol Sci | 10.3390/ijms19123918 | 2018 | | |
| Metabolism | The Bacteroid Periplasm in Soybean Nodules Is an Interkingdom Symbiotic Space. | Strodtman KN, Stevenson SE, Waters JK, Mawhinney TP, Thelen JJ, Polacco JC, Emerich DW. | Mol Plant Microbe Interact | 10.1094/mpmi-12-16-0264-r | 2017 | |
| GmBES1-1 dampens the activity of GmNSP1/2 to mediate brassinosteroid inhibition of nodulation in soybean. | Chen X, Hu X, Wang H, Liu J, Peng Y, He C, He M, Wang X. | Plant Commun | 10.1016/j.xplc.2023.100627 | 2023 | | |
| Genetics | High strain-level diversity of Bradyrhizobium across Australian soils. | Bueno de Mesquita CP, Olm MR, Bissett A, Fierer N. | ISME J | 10.1093/ismejo/wraf222 | 2025 | |
| Transcriptome | Bacillus velezensis 20507 promotes symbiosis between Bradyrhizobium japonicum USDA110 and soybean by secreting flavonoids. | Cheng Y, Jiang X, He X, Wu Z, Lv Q, Zhao S, Zhang X, Wang S, He H, Liu J. | Front Microbiol | 10.3389/fmicb.2025.1572568 | 2025 | |
| Genetics | Pangenomes suggest ecological-evolutionary responses to experimental soil warming. | Choudoir MJ, Narayanan A, Rodriguez-Ramos D, Simoes R, Efroni A, Sondrini A, DeAngelis KM. | mSphere | 10.1128/msphere.00059-25 | 2025 | |
| Metabolism | Bradyrhizobium diazoefficiens Requires Chemical Chaperones To Cope with Osmotic Stress during Soybean Infection. | Ledermann R, Emmenegger B, Couzigou JM, Zamboni N, Kiefer P, Vorholt JA, Fischer HM. | mBio | 10.1128/mbio.00390-21 | 2021 | |
| Genetics | Evaluating urine volume and host depletion methods to enable genome-resolved metagenomics of the urobiome. | Lewis ZJ, Scott A, Madden C, Vik D, Zayed AA, Smith GJ, Justice SS, Rudinsky A, Hokamp J, Hale VL. | Microbiome | 10.1186/s40168-025-02191-x | 2025 | |
| Enzymology | Emerging role of rare earth elements in biomolecular functions. | Yang W, Wu K, Chen H, Huang J, Yu Z. | ISME J | 10.1093/ismejo/wrae241 | 2025 | |
| Single-cell omics in plant biology: mechanistic insights and applications for crop improvement. | Zhu T, Li T, Lu P, Li C. | Adv Biotechnol (Singap) | 10.1007/s44307-025-00074-8 | 2025 | | |
| Transcriptional Control of the Lateral-Flagellar Genes of Bradyrhizobium diazoefficiens. | Mongiardini EJ, Quelas JI, Dardis C, Althabegoiti MJ, Lodeiro AR. | J Bacteriol | 10.1128/jb.00253-17 | 2017 | | |
| Induction by Bradyrhizobium diazoefficiens of Different Pathways for Growth in D-mannitol or L-arabinose Leading to Pronounced Differences in CO2 Fixation, O2 Consumption, and Lateral-Flagellum Production. | Cogo C, Perez-Gimenez J, Rajeswari CB, Luna MF, Lodeiro AR. | Front Microbiol | 10.3389/fmicb.2018.01189 | 2018 | | |
| Metabolism | Co-catabolism of arginine and succinate drives symbiotic nitrogen fixation. | Flores-Tinoco CE, Tschan F, Fuhrer T, Margot C, Sauer U, Christen M, Christen B. | Mol Syst Biol | 10.15252/msb.20199419 | 2020 | |
| Functional investigation of Zur in metal ion homeostasis, motility and multiple stresses resistance in cyanobacteria Synechocystis sp. PCC 6803. | Jin H, Han X, Zheng C, Xu J, Zhang W, Gu Y, Peng Y, Han J, Xu L, Shen X, Yang Y. | Stress Biol | 10.1007/s44154-025-00224-x | 2025 | | |
| Proteins involved in nodulation competitiveness of two Bradyrhizobium diazoefficiens strains induced by soybean root exudates | Liu Y, Guan D, Jiang X, Ma M, Li L, Cao F, Chen H, Shen D, Li J. | Biol Fertil Soils | 10.1007/s00374-014-0969-9 | 2015 | | |
| Metabolism | Proteomic Characterization of Bradyrhizobium diazoefficiens Bacteroids Reveals a Post-Symbiotic, Hemibiotrophic-Like Lifestyle of the Bacteria within Senescing Soybean Nodules. | Strodtman KN, Frank S, Stevenson S, Thelen JJ, Emerich DW. | Int J Mol Sci | 10.3390/ijms19123947 | 2018 | |
| Functional Genomics Approaches to Studying Symbioses between Legumes and Nitrogen-Fixing Rhizobia. | Lardi M, Pessi G. | High Throughput | 10.3390/ht7020015 | 2018 | | |
| Microbiome of Nodules and Roots of Soybean and Common Bean: Searching for Differences Associated with Contrasting Performances in Symbiotic Nitrogen Fixation. | Bender FR, Alves LC, da Silva JFM, Ribeiro RA, Pauli G, Nogueira MA, Hungria M. | Int J Mol Sci | 10.3390/ijms231912035 | 2022 | | |
| The Type IV Secretion System (T4SS) Mediates Symbiosis between Bradyrhizobium sp. SUTN9-2 and Legumes. | Wangthaisong P, Piromyou P, Songwattana P, Wongdee J, Teamtaisong K, Tittabutr P, Boonkerd N, Teaumroong N. | Appl Environ Microbiol | 10.1128/aem.00040-23 | 2023 | | |
| Phylogeny | The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling. | Zhang T, Li H, Ma S, Cao J, Liao H, Huang Q, Chen W. | Appl Environ Microbiol | 10.1128/aem.00605-23 | 2023 | |
| Proposed some interactions at molecular level of PGPR coinoculated with Bradyrhizobium diazoefficiens USDA110 and B.japonicum THA6 on soybean symbiosis and its potential of field application | Prakamhang J, Tittabutr P, Boonkerd N, Teamtisong K, Uchiumi T, Abe M, Teaumroong N. | Appl Soil Ecol | 10.1016/j.apsoil.2014.08.009 | 2015 | | |
| An S-methyltransferase that produces the climate-active gas dimethylsulfide is widespread across diverse marine bacteria. | Zhang Y, Sun C, Guo Z, Liu L, Zhang X, Sun K, Zheng Y, Gates AJ, Todd JD, Zhang XH. | Nat Microbiol | 10.1038/s41564-024-01788-6 | 2024 | | |
| Metabolism | High-throughput parallel proteogenomics: a bacterial case study. | Chapman B, Bellgard M. | Proteomics | 10.1002/pmic.201400185 | 2014 | |
| Metabolism | Anaerobic Reduction of Nitrate to Nitrous Oxide Is Lower in Bradyrhizobium japonicum than in Bradyrhizobium diazoefficiens. | Siqueira AF, Minamisawa K, Sanchez C. | Microbes Environ | 10.1264/jsme2.me17081 | 2017 | |
| Requirements for Efficient Thiosulfate Oxidation in Bradyrhizobium diazoefficiens. | Masuda S, Hennecke H, Fischer HM. | Genes (Basel) | 10.3390/genes8120390 | 2017 | | |
| Metabolism | Regulation of Polyhydroxybutyrate Synthesis in the Soil Bacterium Bradyrhizobium diazoefficiens. | Quelas JI, Mesa S, Mongiardini EJ, Jendrossek D, Lodeiro AR. | Appl Environ Microbiol | 10.1128/aem.00757-16 | 2016 | |
| Genetics | Isolation, genomic characterization, and mushroom growth-promoting effect of the first fungus-derived Rhizobium. | Hua Z, Liu T, Han P, Zhou J, Zhao Y, Huang L, Yuan Y. | Front Microbiol | 10.3389/fmicb.2022.947687 | 2022 | |
| Expanding the Regulon of the Bradyrhizobium diazoefficiens NnrR Transcription Factor: New Insights Into the Denitrification Pathway. | Jimenez-Leiva A, Cabrera JJ, Bueno E, Torres MJ, Salazar S, Bedmar EJ, Delgado MJ, Mesa S. | Front Microbiol | 10.3389/fmicb.2019.01926 | 2019 | | |
| Metabolism | Proteomic analysis of free-living Bradyrhizobium diazoefficiens: highlighting potential determinants of a successful symbiosis. | Gomes DF, da Silva Batista JS, Rolla AA, da Silva LP, Bloch C, Galli-Terasawa LV, Hungria M. | BMC Genomics | 10.1186/1471-2164-15-643 | 2014 | |
| Biotechnology | Combining microorganisms in inoculants is agronomically important but industrially challenging: case study of a composite inoculant containing Bradyrhizobium and Azospirillum for the soybean crop. | Garcia MVC, Nogueira MA, Hungria M. | AMB Express | 10.1186/s13568-021-01230-8 | 2021 | |
| Phylogeny | Genetic diversity and distribution of bradyrhizobia nodulating peanut in acid-neutral soils in Guangdong Province. | Chen J, Hu M, Ma H, Wang Y, Wang ET, Zhou Z, Gu J. | Syst Appl Microbiol | 10.1016/j.syapm.2016.06.002 | 2016 | |
| Phenotype | Reconstruction of the genome-scale metabolic network model of Sinorhizobium fredii CCBAU45436 for free-living and symbiotic states. | Ye A, Shen JN, Li Y, Lian X, Ma BG, Guo FB. | Front Bioeng Biotechnol | 10.3389/fbioe.2024.1377334 | 2024 | |
| Integrating DNA Methylation and Gene Expression Data in the Development of the Soybean-Bradyrhizobium N2-Fixing Symbiosis. | Davis-Richardson AG, Russell JT, Dias R, McKinlay AJ, Canepa R, Fagen JR, Rusoff KT, Drew JC, Kolaczkowski B, Emerich DW, Triplett EW. | Front Microbiol | 10.3389/fmicb.2016.00518 | 2016 | | |
| Enzymology | The NtrYX Two-Component System of Paracoccus denitrificans Is Required for the Maintenance of Cellular Iron Homeostasis and for a Complete Denitrification under Iron-Limited Conditions. | Olaya-Abril A, Luque-Almagro VM, Hidalgo-Carrillo J, Chicano-Galvez E, Urbano FJ, Moreno-Vivian C, Richardson DJ, Roldan MD. | Int J Mol Sci | 10.3390/ijms23169172 | 2022 | |
| Symbiotic matching, taxonomic position, and field assessment of symbiotically efficient rhizobia isolated from soybean root nodules in Sichuan, China | Chen YX, Zhou T, Penttinen P, Zou L, Wang K, Cui YQ, Heng NN, Xu KW. | Biol Fertil Soils | 10.1007/s00374-015-1019-y | 2015 | | |
| Genetics | The genomic landscape of gene-level structural variations in Japanese and global soybean Glycine max cultivars. | Yano R, Li F, Hiraga S, Takeshima R, Kobayashi M, Toda K, Umehara Y, Kajiya-Kanegae H, Iwata H, Kaga A, Ishimoto M. | Nat Genet | 10.1038/s41588-025-02113-5 | 2025 | |
| Novel approach to enhance Bradyrhizobium diazoefficiens nodulation through continuous induction of ROS by manganese ferrite nanomaterials in soybean. | Ma J, Zhou Y, Li J, Song Z, Han H. | J Nanobiotechnology | 10.1186/s12951-022-01372-2 | 2022 | | |
| The distinct cell physiology of Bradyrhizobium at the population and cellular level. | Medici IF, Bartroli L, Guaimas FF, Fulgenzi FR, Molina CL, Sanchez IE, Comerci DJ, Mongiardini E, Soler-Bistue A. | BMC Microbiol | 10.1186/s12866-024-03272-x | 2024 | | |
| [Queries related to the technology of soybean seed inoculation with Bradyrhizobium spp]. | Lodeiro AR. | Rev Argent Microbiol | 10.1016/j.ram.2015.06.006 | 2015 | | |
| A Candidate Bacterial-Type Amino Acid Decarboxylase Is Essential for Male Gamete Exflagellation and Mosquito Transmission of the Malaria Parasite. | Kina UY, Kamil M, Deveci G, Rafiqi AM, Matuschewski K, Aly ASI. | Infect Immun | 10.1128/iai.00167-23 | 2023 | | |
| GmPAP12 Is Required for Nodule Development and Nitrogen Fixation Under Phosphorus Starvation in Soybean. | Wang Y, Yang Z, Kong Y, Li X, Li W, Du H, Zhang C. | Front Plant Sci | 10.3389/fpls.2020.00450 | 2020 | | |
| Biogeographic traits of dimethyl sulfide and dimethylsulfoniopropionate cycling in polar oceans. | Teng ZJ, Qin QL, Zhang W, Li J, Fu HH, Wang P, Lan M, Luo G, He J, McMinn A, Wang M, Chen XL, Zhang YZ, Chen Y, Li CY. | Microbiome | 10.1186/s40168-021-01153-3 | 2021 | | |
| Adaptive Evolution of Rhizobial Symbiosis beyond Horizontal Gene Transfer: From Genome Innovation to Regulation Reconstruction. | Liu S, Jiao J, Tian CF. | Genes (Basel) | 10.3390/genes14020274 | 2023 | | |
| Recombinant and endogenous ways to produce methylated phospholipids in Escherichia coli. | Kleetz J, Vasilopoulos G, Czolkoss S, Aktas M, Narberhaus F. | Appl Microbiol Biotechnol | 10.1007/s00253-021-11654-8 | 2021 | | |
| Calcium and Boron Fertilization Improves Soybean Photosynthetic Efficiency and Grain Yield. | Galeriani TM, Neves GO, Santos Ferreira JH, Oliveira RN, Oliveira SL, Calonego JC, Crusciol CAC. | Plants (Basel) | 10.3390/plants11212937 | 2022 | | |
| Flagellar protein FliL: A many-splendored thing. | Partridge JD, Harshey RM. | Mol Microbiol | 10.1111/mmi.15301 | 2024 | | |
| Swimming performance of Bradyrhizobium diazoefficiens is an emergent property of its two flagellar systems. | Quelas JI, Althabegoiti MJ, Jimenez-Sanchez C, Melgarejo AA, Marconi VI, Mongiardini EJ, Trejo SA, Mengucci F, Ortega-Calvo JJ, Lodeiro AR. | Sci Rep | 10.1038/srep23841 | 2016 | | |
| Genetics | Ancient Bacterial Class Alphaproteobacteria Cytochrome P450 Monooxygenases Can Be Found in Other Bacterial Species. | Nzuza N, Padayachee T, Syed PR, Krys JD, Chen W, Gront D, Nelson DR, Syed K. | Int J Mol Sci | 10.3390/ijms22115542 | 2021 | |
| Unexpected absence of ribosomal protein genes from metagenome-assembled genomes. | Mise K, Iwasaki W. | ISME Commun | 10.1038/s43705-022-00204-6 | 2022 | | |
| Computational Network Inference for Bacterial Interactomics. | James K, Munoz-Munoz J. | mSystems | 10.1128/msystems.01456-21 | 2022 | | |
| Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N2O formation. | Harter J, El-Hadidi M, El-Hadidi M, Huson DH, Kappler A, Behrens S. | Sci Rep | 10.1038/s41598-017-03282-y | 2017 | | |
| Soybean-Nodulating Strains With Low Intrinsic Competitiveness for Nodulation, Good Symbiotic Performance, and Stress-Tolerance Isolated From Soybean-Cropped Soils in Argentina. | Iturralde ET, Covelli JM, Alvarez F, Perez-Gimenez J, Arrese-Igor C, Lodeiro AR. | Front Microbiol | 10.3389/fmicb.2019.01061 | 2019 | | |
| Enzymology | Nitrogen Cycling in Soybean Rhizosphere: Sources and Sinks of Nitrous Oxide (N2O). | Sanchez C, Minamisawa K. | Front Microbiol | 10.3389/fmicb.2019.01943 | 2019 | |
| A Nodule-Localized Small Heat Shock Protein GmHSP17.1 Confers Nodule Development and Nitrogen Fixation in Soybean. | Yang Z, Du H, Sun J, Xing X, Kong Y, Li W, Li X, Zhang C. | Front Plant Sci | 10.3389/fpls.2022.838718 | 2022 | | |
| Metabolism | Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes. | Huang J, Yu Z, Groom J, Cheng JF, Tarver A, Yoshikuni Y, Chistoserdova L. | ISME J | 10.1038/s41396-019-0414-z | 2019 | |
| Sustainable lentil intensification in rice-fallow systems through bioaugmentation with atypical rhizobia and endophytes modulates rhizosphere and nodule microbiome dynamics. | Debnath S, Sorongpong S, Das N, Choure K, Agnihotri VK, Pandey P. | BMC Plant Biol | 10.1186/s12870-025-07165-7 | 2025 | | |
| Genome-Wide Identification and Expression Analysis of the Ammonium Transporter Family Genes in Soybean. | Yang W, Dong X, Yuan Z, Zhang Y, Li X, Wang Y. | Int J Mol Sci | 10.3390/ijms24043991 | 2023 | | |
| Genetics | Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome. | Masuda Y, Mise K, Xu Z, Zhang Z, Shiratori Y, Senoo K, Itoh H. | Microbiome | 10.1186/s40168-024-01812-1 | 2024 | |
| Construction of a Rhodobacter sphaeroides Strain That Efficiently Produces Hydrogen Gas from Acetate without Poly(beta-Hydroxybutyrate) Accumulation: Insight into the Role of PhaR in Acetate Metabolism. | Shimizu T, Teramoto H, Inui M. | Appl Environ Microbiol | 10.1128/aem.00507-22 | 2022 | | |
| Enzymology | Effects of Nodulation on Metabolite Concentrations in Xylem Sap and in the Organs of Soybean Plants Supplied with Different N Forms. | Ohyama T, Isaka M, Saito A, Higuchi K. | Metabolites | 10.3390/metabo13030319 | 2023 | |
| Metabolism | A Putative Type III Secretion System Effector Encoded by the MA20_12780 Gene in Bradyrhizobium japonicum Is-34 Causes Incompatibility with Rj4 Genotype Soybeans. | Tsurumaru H, Hashimoto S, Okizaki K, Kanesaki Y, Yoshikawa H, Yamakawa T. | Appl Environ Microbiol | 10.1128/aem.00823-15 | 2015 | |
| Role of two RpoN in Bradyrhizobium sp. strain DOA9 in symbiosis and free-living growth. | Wongdee J, Piromyou P, Songwattana P, Greetatorn T, Teaumroong N, Boonkerd N, Giraud E, Nouwen N, Tittabutr P. | Front Microbiol | 10.3389/fmicb.2023.1131860 | 2023 | | |
| The rhizosphere microbiome and its influence on the accumulation of metabolites in Bletilla striata (Thunb.) Reichb. f | Li S, Li X, Ye Y, Chen M, Chen H, Yang D, Li M, Jiang F, Zhang X, Zhang C. | BMC Plant Biol | 2024 | | ||
| Genome Sequence of Bradyrhizobium viridifuturi Strain SEMIA 690T, a Nitrogen-Fixing Symbiont of Centrosema pubescens. | Helene LC, Gomes DF, Delamuta JR, Ribeiro RA, Souza RC, Almeida LG, Vasconcelos AT, Hungria M. | Genome Announc | 10.1128/genomea.01481-15 | 2015 | | |
| Metabolism | A dual functional redox enzyme maturation protein for respiratory and assimilatory nitrate reductases in bacteria. | Pinchbeck BJ, Soriano-Laguna MJ, Sullivan MJ, Luque-Almagro VM, Rowley G, Ferguson SJ, Roldan MD, Richardson DJ, Gates AJ. | Mol Microbiol | 10.1111/mmi.14239 | 2019 | |
| Variation in bradyrhizobial NopP effector determines symbiotic incompatibility with Rj2-soybeans via effector-triggered immunity. | Sugawara M, Takahashi S, Umehara Y, Iwano H, Tsurumaru H, Odake H, Suzuki Y, Kondo H, Konno Y, Yamakawa T, Sato S, Mitsui H, Minamisawa K. | Nat Commun | 10.1038/s41467-018-05663-x | 2018 | | |
| Phylogeny | Temperature-Dependent Expression of NodC and Community Structure of Soybean-Nodulating Bradyrhizobia. | Shiro S, Kuranaga C, Yamamoto A, Sameshima-Saito R, Saeki Y. | Microbes Environ | 10.1264/jsme2.me15114 | 2016 | |
| Diversity of common bean rhizobia in blackland of northeastern China and their symbiotic compatibility with two host varieties. | Wang Z, Liu L, Hu D, Wang ET, Gu C, Wang H. | Front Microbiol | 10.3389/fmicb.2023.1195307 | 2023 | | |
| Nitrous oxide reduction by two partial denitrifying bacteria requires denitrification intermediates that cannot be respired. | LaSarre B, Morlen R, Neumann GC, Harwood CS, McKinlay JB. | Appl Environ Microbiol | 10.1128/aem.01741-23 | 2024 | | |
| A small heat shock protein, GmHSP17.9, from nodule confers symbiotic nitrogen fixation and seed yield in soybean. | Yang Z, Du H, Xing X, Li W, Kong Y, Li X, Zhang C. | Plant Biotechnol J | 10.1111/pbi.13698 | 2022 | | |
| LD-transpeptidation is crucial for fitness and polar growth in Agrobacterium tumefaciens. | Aliashkevich A, Guest T, Alvarez L, Gilmore MC, Rea D, Amstutz J, Mateus A, Schiffthaler B, Ruiz I, Typas A, Savitski MM, Brown PJB, Cava F. | PLoS Genet | 10.1371/journal.pgen.1011449 | 2024 | | |
| Flagellar stator genes control a trophic shift from obligate to facultative predation and biofilm formation in a bacterial predator. | Mookherjee A, Mitra M, Sason G, Jose PA, Martinenko M, Pietrokovski S, Jurkevitch E. | mBio | 10.1128/mbio.00715-24 | 2024 | | |
| Long-term fertilization coupled with rhizobium inoculation promotes soybean yield and alters soil bacterial community composition. | Wei W, Guan D, Ma M, Jiang X, Fan F, Meng F, Li L, Zhao B, Zhao Y, Cao F, Chen H, Li J. | Front Microbiol | 10.3389/fmicb.2023.1161983 | 2023 | | |
| Versatile Vectors for Efficient Mutagenesis of Bradyrhizobium diazoefficiens and Other Alphaproteobacteria. | Ledermann R, Strebel S, Kampik C, Fischer HM. | Appl Environ Microbiol | 10.1128/aem.04085-15 | 2016 | | |
| Metabolism | Comparative conventional and phenomics approaches to assess symbiotic effectiveness of Bradyrhizobia strains in soybean (Glycine max L. Merrill) to drought. | Govindasamy V, George P, Aher L, Ramesh SV, Thangasamy A, Anandan S, Raina SK, Kumar M, Rane J, Annapurna K, Minhas PS. | Sci Rep | 10.1038/s41598-017-06441-3 | 2017 | |
| Enzymology | Methanol Dehydrogenases as a Key Biocatalysts for Synthetic Methylotrophy. | Le TK, Lee YJ, Han GH, Yeom SJ. | Front Bioeng Biotechnol | 10.3389/fbioe.2021.787791 | 2021 | |
| Metabolism | Uracil DNA glycosylase (UDG) activities in Bradyrhizobium diazoefficiens: characterization of a new class of UDG with broad substrate specificity. | Chembazhi UV, Patil VV, Sah S, Reeve W, Tiwari RP, Woo E, Varshney U. | Nucleic Acids Res | 10.1093/nar/gkx209 | 2017 | |
| Time course transcriptomic profiling suggests Crp/Fnr transcriptional regulation of nosZ gene in a N2O-reducing thermophile. | Tsuchiya J, Mino S, Fujiwara F, Okuma N, Ichihashi Y, Morris RM, Nunn BL, Timmins-Schiffman E, Sawabe T. | iScience | 10.1016/j.isci.2024.111074 | 2024 | | |
| Genome-Wide Identification of the Soybean LysM-RLK Family Genes and Its Nitrogen Response. | Yao K, Wang Y, Li X, Ji H. | Int J Mol Sci | 10.3390/ijms241713621 | 2023 | | |
| Inoculation with Bacillus megaterium CNPMS B119 and Bacillus subtilis CNPMS B2084 improve P-acquisition and maize yield in Brazil. | de Oliveira-Paiva CA, Bini D, de Sousa SM, Ribeiro VP, Dos Santos FC, de Paula Lana UG, de Souza FF, Gomes EA, Marriel IE. | Front Microbiol | 10.3389/fmicb.2024.1426166 | 2024 | | |
| Biotechnology | The modulation of leguminous plant ethylene levels by symbiotic rhizobia played a role in the evolution of the nodulation process. | Nascimento FX, Tavares MJ, Rossi MJ, Glick BR. | Heliyon | 10.1016/j.heliyon.2018.e01068 | 2018 | |
| Replication-associated inversions are the dominant form of bacterial chromosome structural variation. | D'Iorio M, Dewar K. | Life Sci Alliance | 10.26508/lsa.202201434 | 2023 | | |
| Characterization of two constitutive promoters RPS28 and EIF1 for studying soybean growth, development, and symbiotic nodule development. | Chen S, Peng Y, Lv Q, Liu J, Wu Z, Wang H, Wang X. | aBIOTECH | 10.1007/s42994-022-00073-6 | 2022 | | |
| Extended Hopanoid Loss Reduces Bacterial Motility and Surface Attachment and Leads to Heterogeneity in Root Nodule Growth Kinetics in a Bradyrhizobium-Aeschynomene Symbiosis. | Belin BJ, Tookmanian EM, de Anda J, Wong GCL, Newman DK. | Mol Plant Microbe Interact | 10.1094/mpmi-04-19-0111-r | 2019 | | |
| Genetics | SoxY gene family expansion underpins adaptation to diverse hosts and environments in symbiotic sulfide oxidizers. | Sudo M, Osvatic J, Taylor JD, Dufour SC, Prathep A, Wilkins LGE, Rattei T, Yuen B, Petersen JM. | mSystems | 10.1128/msystems.01135-23 | 2024 | |
| Trehalose Biosynthesis Gene otsA Protects against Stress in the Initial Infection Stage of Burkholderia-Bean Bug Symbiosis. | Lee J, Jeong B, Bae HR, Jang HA, Kim JK. | Microbiol Spectr | 10.1128/spectrum.03510-22 | 2023 | | |
| Genetics | Selection for oligotrophy among bacteria inhabiting host microbiomes. | Jackrel SL, White JD, Perez-Coronel E, Koch RY. | mBio | 10.1128/mbio.01415-23 | 2023 | |
| Land-Use Change and Management Intensification Is Associated with Shifts in Composition of Soil Microbial Communities and Their Functional Diversity in Coffee Agroecosystems. | Carrasco-Espinosa K, Avitia M, Barron-Sandoval A, Abbruzzini TF, Salazar Cabrera UI, Arroyo-Lambaer D, Uscanga A, Campo J, Benitez M, Wegier A, Rosell JA, Reverchon F, Hernandez G, Boege K, Escalante AE. | Microorganisms | 10.3390/microorganisms10091763 | 2022 | | |
| DSF inactivator RpfB homologous FadD upregulated in Bradyrhizobium japonicum under iron limiting conditions. | Dutta K, Shityakov S, Maruyama F. | Sci Rep | 10.1038/s41598-023-35487-9 | 2023 | | |
| Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production. | Mazoyon C, Hirel B, Pecourt A, Catterou M, Gutierrez L, Sarazin V, Dubois F, Duclercq J. | Microorganisms | 10.3390/microorganisms11010199 | 2023 | | |
| Genetics | Whole Proteome Clustering of 2,307 Proteobacterial Genomes Reveals Conserved Proteins and Significant Annotation Issues. | Lockwood S, Brayton KA, Daily JA, Broschat SL. | Front Microbiol | 10.3389/fmicb.2019.00383 | 2019 | |
| Title: Hypermethylation of miRNA Genes During Nodule Development. | Piya S, Lopes-Caitar VS, Kim WS, Pantalone V, Krishnan HB, Hewezi T. | Front Mol Biosci | 10.3389/fmolb.2021.616623 | 2021 | | |
| Metabolism | Specific hopanoid classes differentially affect free-living and symbiotic states of Bradyrhizobium diazoefficiens. | Kulkarni G, Busset N, Molinaro A, Gargani D, Chaintreuil C, Silipo A, Giraud E, Newman DK. | mBio | 10.1128/mbio.01251-15 | 2015 | |
| Atypical homodimerization revealed by the structure of the (S)-enantioselective haloalkane dehalogenase DmmarA from Mycobacterium marinum. | Snajdarova K, Marques SM, Damborsky J, Bednar D, Marek M. | Acta Crystallogr D Struct Biol | 10.1107/s2059798323006642 | 2023 | | |
| Enzymology | Diversity of Bradyrhizobium in Non-Leguminous Sorghum Plants: B. ottawaense Isolates Unique in Genes for N2O Reductase and Lack of the Type VI Secretion System. | Wasai-Hara S, Hara S, Morikawa T, Sugawara M, Takami H, Yoneda J, Tokunaga T, Minamisawa K. | Microbes Environ | 10.1264/jsme2.me19102 | 2020 | |
| Phylogeny | Microsymbiont diversity and phylogeny of native bradyrhizobia associated with soybean (Glycine max L. Merr.) nodulation in South African soils. | Naamala J, Jaiswal SK, Dakora FD. | Syst Appl Microbiol | 10.1016/j.syapm.2016.05.009 | 2016 | |
| Nickel mine soil is a potential source for soybean plant growth promoting and heavy metal tolerant rhizobia. | Liu H, Cui Y, Zhou J, Penttinen P, Liu J, Zeng L, Chen Q, Gu Y, Zou L, Zhao K, Xiang Q, Yu X. | PeerJ | 10.7717/peerj.13215 | 2022 | | |
| Genetics | The landscape of bacterial presence in tumor and adjacent normal tissue across 9 major cancer types using TCGA exome sequencing. | Rodriguez RM, Hernandez BY, Menor M, Deng Y, Khadka VS. | Comput Struct Biotechnol J | 10.1016/j.csbj.2020.03.003 | 2020 | |
| Pathogenicity | Three separate pathways in Rhizobium leguminosarum maintain phosphatidylcholine biosynthesis, which is required for symbiotic nitrogen fixation with clover. | Kleetz J, Mizza A-S, Shevyreva I, Welter L, Brocks C, Hemschemeier A, Aktas M, Narberhaus F. | Appl Environ Microbiol | 10.1128/aem.00590-24 | 2024 | |
| Signaling by reactive molecules and antioxidants in legume nodules. | Minguillon S, Matamoros MA, Duanmu D, Becana M. | New Phytol | 10.1111/nph.18434 | 2022 | | |
| Pathogenicity | Metabolomic Profiling of Bradyrhizobium diazoefficiens-Induced Root Nodules Reveals Both Host Plant-Specific and Developmental Signatures. | Lardi M, Murset V, Fischer HM, Mesa S, Ahrens CH, Zamboni N, Pessi G. | Int J Mol Sci | 10.3390/ijms17060815 | 2016 | |
| Native Rhizobia Improve Plant Growth, Fix N2, and Reduce Greenhouse Emissions of Sunnhemp More than Commercial Rhizobia Inoculants in Florida Citrus Orchards. | Castellano-Hinojosa A, Mora C, Strauss SL. | Plants (Basel) | 10.3390/plants11223011 | 2022 | | |
| Enzymology | FixK2 Is the Main Transcriptional Activator of Bradyrhizobium diazoefficiens nosRZDYFLX Genes in Response to Low Oxygen. | Torres MJ, Bueno E, Jimenez-Leiva A, Cabrera JJ, Bedmar EJ, Mesa S, Delgado MJ. | Front Microbiol | 10.3389/fmicb.2017.01621 | 2017 | |
| Flagellar motor remodeling during swarming requires FliL. | Partridge JD, Dufour Y, Hwang Y, Harshey RM. | Mol Microbiol | 10.1111/mmi.15148 | 2023 | | |
| Enzymology | Soybean inoculants in Brazil: an overview of quality control. | de Souza GK, Sampaio J, Longoni L, Ferreira S, Alvarenga S, Beneduzi A. | Braz J Microbiol | 10.1007/s42770-018-0028-z | 2019 | |
| G-type receptor-like kinase AsNIP43 interacts with rhizobia effector nodulation outer protein P and is required for symbiosis. | Liu Y, Lin Y, Wei F, Lv Y, Xie F, Chen D, Lin H, Li Y. | Plant Physiol | 10.1093/plphys/kiad318 | 2023 | | |
| Metabolism | A systems-level insight into PHB-driven metabolic adaptation orchestrated by the PHB-binding transcriptional regulator AniA (PhaR). | Lagares A, Krol E, Juhling T, Glatter T, Becker A. | mSystems | 10.1128/msystems.00760-25 | 2025 | |
| Metabolism | Cyanuric Acid Biodegradation via Biuret: Physiology, Taxonomy, and Geospatial Distribution. | Aukema KG, Tassoulas LJ, Robinson SL, Konopatski JF, Bygd MD, Wackett LP. | Appl Environ Microbiol | 10.1128/aem.01964-19 | 2020 | |
| Tea plant-legume intercropping simultaneously improves soil fertility and tea quality by changing bacillus species composition. | Huang Z, Cui C, Cao Y, Dai J, Cheng X, Hua S, Wang W, Duan Y, Petropoulos E, Wang H, Zhou L, Fang W, Zhong Z. | Hortic Res | 10.1093/hr/uhac046 | 2022 | | |
| A Lipopolysaccharide Synthesis Gene rfaD from Mesorhizobium huakuii Is Involved in Nodule Development and Symbiotic Nitrogen Fixation. | Liu Y, Lin Y, Guan N, Song Y, Li Y, Xie X. | Microorganisms | 10.3390/microorganisms11010059 | 2022 | | |
| Spatial Mapping of Plant N-Glycosylation Cellular Heterogeneity Inside Soybean Root Nodules Provided Insights Into Legume-Rhizobia Symbiosis. | Velickovic D, Liao YC, Thibert S, Velickovic M, Anderton C, Voglmeir J, Stacey G, Zhou M. | Front Plant Sci | 10.3389/fpls.2022.869281 | 2022 | | |
| Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution. | Aroli S, Woo EJ, Gopal B, Varshney U. | Nucleic Acids Res | 10.1093/nar/gkad486 | 2023 | | |
| Metabolism | A Disulfide Oxidoreductase (CHU_1165) Is Essential for Cellulose Degradation by Affecting Outer Membrane Proteins in Cytophaga hutchinsonii. | Zhao D, Wang Y, Wang S, Zhang W, Qi Q, Lu X. | Appl Environ Microbiol | 10.1128/aem.02789-19 | 2020 | |
| Biosynthesis of polyhydroxybutyrate by Methylorubrum extorquens DSM13060 is essential for intracellular colonization in plant endosymbiosis. | Baruah N, Haajanen R, Rahman MT, Pirttila AM, Koskimaki JJ. | Front Plant Sci | 10.3389/fpls.2024.1302705 | 2024 | | |
| Genetics | An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics. | Omasits U, Varadarajan AR, Schmid M, Goetze S, Melidis D, Bourqui M, Nikolayeva O, Quebatte M, Patrignani A, Dehio C, Frey JE, Robinson MD, Wollscheid B, Ahrens CH. | Genome Res | 10.1101/gr.218255.116 | 2017 | |
| Enzymology | Lanthanide-Dependent Methanol and Formaldehyde Oxidation in Methylobacterium aquaticum Strain 22A. | Yanpirat P, Nakatsuji Y, Hiraga S, Fujitani Y, Izumi T, Masuda S, Mitsui R, Nakagawa T, Tani A. | Microorganisms | 10.3390/microorganisms8060822 | 2020 | |
| Mesorhizobium sp. J8 can establish symbiosis with Glycyrrhiza uralensis, increasing glycyrrhizin production. | Kusaba I, Nakao T, Maita H, Sato S, Chijiiwa R, Yamada E, Arima S, Kojoma M, Ishimaru K, Akashi R, Suzuki A. | Plant Biotechnol (Tokyo) | 10.5511/plantbiotechnology.20.1124a | 2021 | | |
| Anaerobic 3-methylhopanoid production by an acidophilic photosynthetic purple bacterium. | Mayer MH, Parenteau MN, Kempher ML, Madigan MT, Jahnke LL, Welander PV. | Arch Microbiol | 10.1007/s00203-021-02561-7 | 2021 | | |
| Mechanisms Underlying Soybean Response to Phosphorus Deficiency through Integration of Omics Analysis. | Mo X, Liu G, Zhang Z, Lu X, Liang C, Tian J. | Int J Mol Sci | 10.3390/ijms23094592 | 2022 | | |
| Advances in microbial based bio-inoculum for amelioration of soil health and sustainable crop production. | Samantaray A, Chattaraj S, Mitra D, Ganguly A, Kumar R, Gaur A, Mohapatra PKD, Santos-Villalobos SL, Rani A, Thatoi H. | Curr Res Microb Sci | 10.1016/j.crmicr.2024.100251 | 2024 | | |
| Expression of soybean plant hemoglobin gene family under abiotic stresses. | Araragi M, Ikeura A, Uchiumi T. | Plant Biotechnol (Tokyo) | 10.5511/plantbiotechnology.20.0907a | 2021 | | |
| FliL and its paralog MotF have distinct roles in the stator activity of the Sinorhizobium meliloti flagellar motor. | Sobe RC, Gilbert C, Vo L, Alexandre G, Scharf BE. | Mol Microbiol | 10.1111/mmi.14964 | 2022 | | |
| Local and Systemic Effect of Cytokinins on Soybean Nodulation and Regulation of Their Isopentenyl Transferase (IPT) Biosynthesis Genes Following Rhizobia Inoculation. | Mens C, Li D, Haaima LE, Gresshoff PM, Ferguson BJ. | Front Plant Sci | 10.3389/fpls.2018.01150 | 2018 | | |
| Metabolism | Molybdenum Foliar Fertilization Improves Photosynthetic Metabolism and Grain Yields of Field-Grown Soybean and Maize. | Oliveira SL, Crusciol CAC, Rodrigues VA, Galeriani TM, Portugal JR, Bossolani JW, Moretti LG, Calonego JC, Cantarella H. | Front Plant Sci | 10.3389/fpls.2022.887682 | 2022 | |
| Transcriptome | Single-cell transcriptome atlases of soybean root and mature nodule reveal new regulatory programs that control the nodulation process. | Cervantes-Perez SA, Zogli P, Amini S, Thibivilliers S, Tennant S, Hossain MS, Xu H, Meyer I, Nooka A, Ma P, Yao Q, Naldrett MJ, Farmer A, Martin O, Bhattacharya S, Klaver J, Libault M. | Plant Commun | 10.1016/j.xplc.2024.100984 | 2024 | |
| Elevated Atmospheric CO2 and Nitrogen Fertilization Affect the Abundance and Community Structure of Rice Root-Associated Nitrogen-Fixing Bacteria. | Liu J, Han J, Zhu C, Cao W, Luo Y, Zhang M, Zhang S, Jia Z, Yu R, Zhao J, Bao Z. | Front Microbiol | 10.3389/fmicb.2021.628108 | 2021 | | |
| Co-Inoculation with Azospirillum brasilense and Bradyrhizobium sp. Enhances Nitrogen Uptake and Yield in Field-Grown Cowpea and Did Not Change N-Fertilizer Recovery. | Galindo FS, Pagliari PH, da Silva EC, Silva VM, Fernandes GC, Rodrigues WL, Ceu EGO, de Lima BH, Jalal A, Muraoka T, Buzetti S, Lavres J, Teixeira Filho MCM. | Plants (Basel) | 10.3390/plants11141847 | 2022 | | |
| Contribution of Biofertilizers to Pulse Crops: From Single-Strain Inoculants to New Technologies Based on Microbiomes Strategies. | Xavier GR, Jesus EC, Dias A, Coelho MRR, Molina YC, Rumjanek NG. | Plants (Basel) | 10.3390/plants12040954 | 2023 | | |
| Genetics | A 4-hydroxybenzoate 3-hydroxylase mutant enables 4-amino-3-hydroxybenzoic acid production from glucose in Corynebacterium glutamicum. | Nonaka K, Osamura T, Takahashi F. | Microb Cell Fact | 10.1186/s12934-023-02179-y | 2023 | |
| Overexpression of RuBisCO form I and II genes in Rhodopseudomonas palustris TIE-1 augments polyhydroxyalkanoate production heterotrophically and autotrophically. | Ranaivoarisoa TO, Bai W, Karthikeyan R, Steele H, Silberman M, Olabode J, Conners E, Gallagher B, Bose A. | Appl Environ Microbiol | 10.1128/aem.01438-24 | 2024 | | |
| The Biosynthesis and Functions of Polyamines in the Interaction of Plant Growth-Promoting Rhizobacteria with Plants. | Dunn MF, Becerra-Rivera VA. | Plants (Basel) | 10.3390/plants12142671 | 2023 | | |
| Transcriptional analysis of genes involved in competitive nodulation in Bradyrhizobium diazoefficiens at the presence of soybean root exudates. | Liu Y, Jiang X, Guan D, Zhou W, Ma M, Zhao B, Cao F, Li L, Li J. | Sci Rep | 10.1038/s41598-017-11372-0 | 2017 | | |
| Legume-rhizobium dance: an agricultural tool that could be improved? | Basile LA, Lepek VC. | Microb Biotechnol | 10.1111/1751-7915.13906 | 2021 | | |
| Effect of the application of vermicompost and millicompost humic acids about the soybean microbiome under water restriction conditions. | da Silva MSRA, de Carvalho LAL, Braos LB, de Sousa Antunes LF, da Silva CSRA, da Silva CGN, Pinheiro DG, Correia MEF, Araujo EDS, Colnago LA, Desoignies N, Zonta E, Rigobelo EC. | Front Microbiol | 10.3389/fmicb.2022.1000222 | 2022 | | |
| Genetic divergence of bradyrhizobium strains nodulating soybeans as revealed by multilocus sequence analysis of genes inside and outside the symbiosis island. | Zhang XX, Guo HJ, Wang R, Sui XH, Zhang YM, Wang ET, Tian CF, Chen WX. | Appl Environ Microbiol | 10.1128/aem.00044-14 | 2014 | | |
| Microbial Interactions Within Multiple-Strain Biological Control Agents Impact Soil-Borne Plant Disease. | Niu B, Wang W, Yuan Z, Sederoff RR, Sederoff H, Chiang VL, Borriss R. | Front Microbiol | 10.3389/fmicb.2020.585404 | 2020 | | |
| A Comprehensive Study of Biohopanoid Production in Alphaproteobacteria: Biosynthetic, Chemotaxonomical, and Geobiological Implications. | Sinninghe Damste JS, Koenen M, Thiel V, Richter N, Hopmans EC, Bale NJ. | Geobiology | 10.1111/gbi.70038 | 2025 | | |
| Metabolism | Conserved small mRNA with an unique, extended Shine-Dalgarno sequence. | Hahn J, Thalmann S, Migur A, von Boeselager RF, Kubatova N, Kubareva E, Schwalbe H, Evguenieva-Hackenberg E. | RNA Biol | 10.1080/15476286.2016.1256534 | 2017 | |
| Significance of Plant Growth Promoting Rhizobacteria in Grain Legumes: Growth Promotion and Crop Production. | Swarnalakshmi K, Yadav V, Tyagi D, Dhar DW, Kannepalli A, Kumar S, Kumar S. | Plants (Basel) | 10.3390/plants9111596 | 2020 | | |
| RhizoBindingSites, a Database of DNA-Binding Motifs in Nitrogen-Fixing Bacteria Inferred Using a Footprint Discovery Approach. | Taboada-Castro H, Castro-Mondragon JA, Aguilar-Vera A, Hernandez-Alvarez AJ, van Helden J, Encarnacion-Guevara S. | Front Microbiol | 10.3389/fmicb.2020.567471 | 2020 | | |
| Identification of Bradyrhizobium elkanii Genes Involved in Incompatibility with Vigna radiata. | Nguyen HP, Miwa H, Kaneko T, Sato S, Okazaki S. | Genes (Basel) | 10.3390/genes8120374 | 2017 | | |
| A glutamate synthase mutant of Bradyrhizobium sp. strain ORS285 is unable to induce nodules on Nod factor-independent Aeschynomene species. | Nouwen N, Chaintreuil C, Fardoux J, Giraud E. | Sci Rep | 10.1038/s41598-021-00480-7 | 2021 | | |
| Proteome | High-Throughput Mass Spectrometric Analysis of the Whole Proteome and Secretome From Sinorhizobium fredii Strains CCBAU25509 and CCBAU45436. | Rehman HM, Cheung WL, Wong KS, Xie M, Luk CY, Wong FL, Li MW, Tsai SN, To WT, Chan LY, Lam HM. | Front Microbiol | 10.3389/fmicb.2019.02569 | 2019 | |
| Use of the rhizobial type III effector gene nopP to improve Agrobacterium rhizogenes-mediated transformation of Lotus japonicus. | Wang Y, Yang F, Zhu PF, Khan A, Xie ZP, Staehelin C. | Plant Methods | 10.1186/s13007-021-00764-z | 2021 | | |
| Metabolism | The pathogenic development of Sclerotinia sclerotiorum in soybean requires specific host NADPH oxidases. | Ranjan A, Jayaraman D, Grau C, Hill JH, Whitham SA, Ane JM, Smith DL, Kabbage M. | Mol Plant Pathol | 10.1111/mpp.12555 | 2018 | |
| Genome analysis for the identification of genes involved in phenanthrene biodegradation pathway in Stenotrophomonas indicatrix CPHE1. Phenanthrene mineralization in soils assisted by integrated approaches. | Lara-Moreno A, Merchan F, Morillo E, Zampolli J, Di Gennaro P, Villaverde J. | Front Bioeng Biotechnol | 10.3389/fbioe.2023.1158177 | 2023 | | |
| Crystal structure and functional implications of cyclic di-pyrimidine-synthesizing cGAS/DncV-like nucleotidyltransferases. | Yang CS, Ko TP, Chen CJ, Hou MH, Wang YC, Chen Y. | Nat Commun | 10.1038/s41467-023-40787-9 | 2023 | | |
| Enhanced Soybean Productivity by Inoculation With Indigenous Bradyrhizobium Strains in Agroecological Conditions of Northeast Germany. | Omari RA, Yuan K, Anh KT, Reckling M, Halwani M, Egamberdieva D, Ohkama-Ohtsu N, Bellingrath-Kimura SD. | Front Plant Sci | 10.3389/fpls.2021.707080 | 2021 | | |
| Enzymology | Evidence for a Putative Isoprene Reductase in Acetobacterium wieringae. | Kronen M, Vazquez-Campos X, Wilkins MR, Lee M, Manefield MJ. | mSystems | 10.1128/msystems.00119-23 | 2023 | |
| The Novel Monooxygenase Gene dipD in the dip Gene Cluster of Alcaligenes faecalis JQ135 Is Essential for the Initial Catabolism of Dipicolinic Acid. | Mu Y, Xu S, Liu G, Cheng M, Dai W, Chen Q, Yan X, Hong Q, He J, Jiang J, Qiu J. | Appl Environ Microbiol | 10.1128/aem.00360-22 | 2022 | | |
| Genetics | Identification of loci associated with water use efficiency and symbiotic nitrogen fixation in soybean. | Arifuzzaman M, Mamidi S, Sanz-Saez A, Zakeri H, Scaboo A, Fritschi FB. | Front Plant Sci | 10.3389/fpls.2023.1271849 | 2023 | |
| Enzymology | Ancient Evolution and Recent Evolution Converge for the Biodegradation of Cyanuric Acid and Related Triazines. | Seffernick JL, Wackett LP. | Appl Environ Microbiol | 10.1128/aem.03594-15 | 2016 | |
| Structural characterization of core-bradavidin in complex with biotin. | Agrawal N, Maatta JAE, Kulomaa MS, Hytonen VP, Johnson MS, Airenne TT. | PLoS One | 10.1371/journal.pone.0176086 | 2017 | | |
| Genetics | Microbial Diversity Analysis and Genome Sequencing Identify Xanthomonas perforans as the Pathogen of Bacterial Leaf Canker of Water Spinach (Ipomoea aquatic). | Hu M, Li C, Zhou X, Xue Y, Wang S, Hu A, Chen S, Mo X, Zhou J. | Front Microbiol | 10.3389/fmicb.2021.752760 | 2021 | |
| Transcriptome | Transcriptome and Metabolome Analyses Reveal That Nitrate Strongly Promotes Nitrogen and Carbon Metabolism in Soybean Roots, but Tends to Repress It in Nodules. | Ishikawa S, Ono Y, Ohtake N, Sueyoshi K, Tanabata S, Ohyama T. | Plants (Basel) | 10.3390/plants7020032 | 2018 | |
| Enzymology | Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI. | Kim SH, Kim M, Park D, Byun S, Rhee S. | J Biol Chem | 10.1016/j.jbc.2022.101869 | 2022 | |
| Bacteria related to Bradyrhizobium yuanmingense from Ghana are effective groundnut micro-symbionts. | Osei O, Abaidoo RC, Ahiabor BDK, Boddey RM, Rouws LFM. | Appl Soil Ecol | 10.1016/j.apsoil.2018.03.003 | 2018 | | |
| Transcriptomics reveal core activities of the plant growth-promoting bacterium Delftia acidovorans RAY209 during interaction with canola and soybean roots. | Suchan DM, Bergsveinson J, Manzon L, Pierce A, Kryachko Y, Korber D, Tan Y, Tambalo DD, Khan NH, Whiting M, Yost CK. | Microb Genom | 10.1099/mgen.0.000462 | 2020 | | |
| Nonadditive Transcriptomic Signatures of Genotype-by-Genotype Interactions during the Initiation of Plant-Rhizobium Symbiosis. | Fagorzi C, Bacci G, Huang R, Cangioli L, Checcucci A, Fini M, Perrin E, Natali C, diCenzo GC, Mengoni A. | mSystems | 10.1128/msystems.00974-20 | 2021 | | |
| Aerobic Methoxydotrophy: Growth on Methoxylated Aromatic Compounds by Methylobacteriaceae. | Lee JA, Stolyar S, Marx CJ. | Front Microbiol | 10.3389/fmicb.2022.849573 | 2022 | | |
| Phylogeny | Bacterial avidins are a widely distributed protein family in Actinobacteria, Proteobacteria and Bacteroidetes. | Laitinen OH, Kuusela TP, Kukkurainen S, Nurminen A, Sinkkonen A, Hytonen VP. | BMC Ecol Evol | 10.1186/s12862-021-01784-y | 2021 | |
| Scrutiny of NolA and NodD1 Regulatory Roles in Symbiotic Compatibility Unveils New Insights into Bradyrhizobium guangxiense CCBAU53363 Interacting with Peanut (Arachis hypogaea) and Mung Bean (Vigna radiata). | Shang JY, Zhang P, Jia YW, Lu YN, Wu Y, Ji S, Chen, Wang ET, Chen WX, Sui XH. | Microbiol Spectr | 10.1128/spectrum.02096-22 | 2023 | | |
| Enzymology | Rhizobium etli Produces Nitrous Oxide by Coupling the Assimilatory and Denitrification Pathways. | Hidalgo-Garcia A, Torres MJ, Salas A, Bedmar EJ, Girard L, Delgado MJ. | Front Microbiol | 10.3389/fmicb.2019.00980 | 2019 | |
| Metabolism | Importance of Poly-3-Hydroxybutyrate Metabolism to the Ability of Herbaspirillum seropedicae To Promote Plant Growth. | Silveira Alves LP, Plucani do Amaral F, Kim D, Todo Bom M, Pinero Gavidia M, Silvano Teixeira C, Holthman F, de Oliveira Pedrosa F, Maltempi de Souza E, Chubatsu LS, Muller-Santos M, Stacey G. | Appl Environ Microbiol | 10.1128/aem.02586-18 | 2019 | |
| Cyclic di-GMP inhibits nitrate assimilation by impairing the antitermination function of NasT in Pseudomonas putida. | Nie L, Xiao Y, Zhou T, Feng H, He M, Liang Q, Mu K, Nie H, Huang Q, Chen W. | Nucleic Acids Res | 10.1093/nar/gkad1117 | 2024 | | |
| Plant Hormones Differentially Control the Sub-Cellular Localization of Plasma Membrane Microdomains during the Early Stage of Soybean Nodulation. | Qiao Z, Zogli P, Libault M. | Genes (Basel) | 10.3390/genes10121012 | 2019 | | |
| The miR156b-GmSPL9d module modulates nodulation by targeting multiple core nodulation genes in soybean. | Yun J, Sun Z, Jiang Q, Wang Y, Wang C, Luo Y, Zhang F, Li X. | New Phytol | 10.1111/nph.17899 | 2022 | | |
| Coordinated regulation of chemotaxis and resistance to copper by CsoR in Pseudomonas putida. | He M, Tao Y, Mu K, Feng H, Fan Y, Liu T, Huang Q, Xiao Y, Chen W. | Elife | 10.7554/elife.100914 | 2025 | | |
| RpuS/R Is a Novel Two-Component Signal Transduction System That Regulates the Expression of the Pyruvate Symporter MctP in Sinorhizobium fredii NGR234. | Ramos AL, Aquino M, Garcia G, Gaspar M, de la Cruz C, Saavedra-Flores A, Brom S, Cervantes-Rivera R, Galindo-Sanchez CE, Hernandez R, Puhar A, Lupas AN, Sepulveda E. | Front Microbiol | 10.3389/fmicb.2022.871077 | 2022 | | |
| A nitrogen fixing symbiosis-specific pathway required for legume flowering. | Yun J, Wang C, Zhang F, Chen L, Sun Z, Cai Y, Luo Y, Liao J, Wang Y, Cha Y, Zhang X, Ren Y, Wu J, Hasegawa PM, Tian C, Su H, Ferguson BJ, Gresshoff PM, Hou W, Han T, Li X. | Sci Adv | 10.1126/sciadv.ade1150 | 2023 | | |
| Pathogenicity | Application of Nitrate, Ammonium, or Urea Changes the Concentrations of Ureides, Urea, Amino Acids and Other Metabolites in Xylem Sap and in the Organs of Soybean Plants (Glycine max (L.) Merr.). | Ono Y, Fukasawa M, Sueyoshi K, Ohtake N, Sato T, Tanabata S, Toyota R, Higuchi K, Saito A, Ohyama T. | Int J Mol Sci | 10.3390/ijms22094573 | 2021 | |
| Metabolism | A novel way to synthesize pantothenate in bacteria involves beta-alanine synthase present in uracil degradation pathway. | Lopez-Samano M, Beltran LFL, Sanchez-Thomas R, Davalos A, Villasenor T, Garcia-Garcia JD, Garcia-de Los Santos A. | Microbiologyopen | 10.1002/mbo3.1006 | 2020 | |
| Metabolism | Reconstruction and analysis of a genome-scale metabolic model for Agrobacterium tumefaciens. | Xu N, Yang Q, Yang X, Wang M, Guo M. | Mol Plant Pathol | 10.1111/mpp.13032 | 2021 | |
| Hybrid Histidine Kinase WelA of Sphingomonas sp. WG Contributes to WL Gum Biosynthesis and Motility. | Li H, Chen M, Zhang Z, Li B, Liu J, Xue H, Ji S, Guo Z, Wang J, Zhu H. | Front Microbiol | 10.3389/fmicb.2022.792315 | 2022 | | |
| Metabolism | Altering N2O emissions by manipulating wheat root bacterial community. | Usyskin-Tonne A, Hadar Y, Minz D. | Sci Rep | 10.1038/s41598-019-44124-3 | 2019 | |
| The role of legumes in the sustainable intensification of African smallholder agriculture: Lessons learnt and challenges for the future. | Vanlauwe B, Hungria M, Kanampiu F, Giller KE. | Agric Ecosyst Environ | 10.1016/j.agee.2019.106583 | 2019 | | |
| Transcriptome | Integrated Transcriptomic and Un-Targeted Metabolomics Analysis Reveals Mulberry Fruit (Morus atropurpurea) in Response to Sclerotiniose Pathogen Ciboria shiraiana Infection. | Bao L, Gao H, Zheng Z, Zhao X, Zhang M, Jiao F, Su C, Qian Y. | Int J Mol Sci | 10.3390/ijms21051789 | 2020 | |
| Mechanistic Insights of the Interaction of Plant Growth-Promoting Rhizobacteria (PGPR) With Plant Roots Toward Enhancing Plant Productivity by Alleviating Salinity Stress. | Bhat MA, Kumar V, Bhat MA, Wani IA, Dar FL, Farooq I, Bhatti F, Koser R, Rahman S, Jan AT. | Front Microbiol | 10.3389/fmicb.2020.01952 | 2020 | | |
| Multiple Domains in the Rhizobial Type III Effector Bel2-5 Determine Symbiotic Efficiency With Soybean. | Ratu STN, Hirata A, Kalaw CO, Yasuda M, Tabuchi M, Okazaki S. | Front Plant Sci | 10.3389/fpls.2021.689064 | 2021 | | |
| Multiple Genes of Symbiotic Plasmid and Chromosome in Type II Peanut Bradyrhizobium Strains Corresponding to the Incompatible Symbiosis With Vigna radiata. | Wu Y, Li YH, Shang JY, Wang ET, Chen, Huo B, Sui XH, Tian CF, Chen WF, Chen WX. | Front Microbiol | 10.3389/fmicb.2020.01175 | 2020 | | |
| Identification of Bradyrhizobium elkanii Genes Involved in Incompatibility with Soybean Plants Carrying the Rj4 Allele. | Faruque OM, Miwa H, Yasuda M, Fujii Y, Kaneko T, Sato S, Okazaki S. | Appl Environ Microbiol | 10.1128/aem.01942-15 | 2015 | | |
| Metabolism | Paraburkholderia phymatum Homocitrate Synthase NifV Plays a Key Role for Nitrogenase Activity during Symbiosis with Papilionoids and in Free-Living Growth Conditions. | Belles-Sancho P, Lardi M, Liu Y, Hug S, Pinto-Carbo MA, Zamboni N, Pessi G. | Cells | 10.3390/cells10040952 | 2021 | |
| Metabolism | Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria. | Sharma M, Lingford JP, Petricevic M, Snow AJD, Zhang Y, Jarva MA, Mui JW, Scott NE, Saunders EC, Mao R, Epa R, da Silva BM, Pires DEV, Ascher DB, McConville MJ, Davies GJ, Williams SJ, Goddard-Borger ED. | Proc Natl Acad Sci U S A | 10.1073/pnas.2116022119 | 2022 | |
| Metabolism | 3,6-Dichlorosalicylate Catabolism Is Initiated by the DsmABC Cytochrome P450 Monooxygenase System in Rhizorhabdus dicambivorans Ndbn-20. | Li N, Yao L, He Q, Qiu J, Cheng D, Ding D, Tao Q, He J, Jiang J. | Appl Environ Microbiol | 10.1128/aem.02133-17 | 2018 | |
| Transcriptome Analysis of Paraburkholderia phymatum under Nitrogen Starvation and during Symbiosis with Phaseolus Vulgaris. | Lardi M, Liu Y, Purtschert G, Bolzan de Campos S, Pessi G. | Genes (Basel) | 10.3390/genes8120389 | 2017 | | |
| Enzymology | Phospholipid N-Methyltransferases Produce Various Methylated Phosphatidylethanolamine Derivatives in Thermophilic Bacteria. | Kleetz J, Welter L, Mizza AS, Aktas M, Narberhaus F. | Appl Environ Microbiol | 10.1128/aem.01105-21 | 2021 | |
| Genetics | Isolation, Characterization, and Complete Genome Sequence of a Bradyrhizobium Strain Lb8 From Nodules of Peanut Utilizing Crack Entry Infection. | Paudel D, Liu F, Wang L, Crook M, Maya S, Peng Z, Kelley K, Ane JM, Wang J. | Front Microbiol | 10.3389/fmicb.2020.00093 | 2020 | |
| Metabolism | Unraveling a Tangled Skein: Evolutionary Analysis of the Bacterial Gibberellin Biosynthetic Operon. | Nett RS, Nguyen H, Nagel R, Marcassa A, Charles TC, Friedberg I, Peters RJ. | mSphere | 10.1128/msphere.00292-20 | 2020 | |
| Salix purpurea Stimulates the Expression of Specific Bacterial Xenobiotic Degradation Genes in a Soil Contaminated with Hydrocarbons. | Page AP, Yergeau E, Greer CW. | PLoS One | 10.1371/journal.pone.0132062 | 2015 | | |
| Beneficial Plant-Associated Microorganisms From Semiarid Regions and Seasonally Dry Environments: A Review. | Bonatelli ML, Lacerda-Junior GV, Dos Reis Junior FB, Fernandes-Junior PI, Melo IS, Quecine MC. | Front Microbiol | 10.3389/fmicb.2020.553223 | 2020 | | |
| Metabolism | Identification of 9alpha-hydroxy-17-oxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid in steroid degradation by Comamonas testosteroni TA441 and its conversion to the corresponding 6-en-5-oyl coenzyme A (CoA) involving open reading frame 28 (ORF28)- and ORF30-encoded acyl-CoA dehydrogenases. | Horinouchi M, Hayashi T, Koshino H, Malon M, Hirota H, Kudo T. | J Bacteriol | 10.1128/jb.01878-14 | 2014 | |
| Variation in rhizosphere microbial communities and its association with the symbiotic efficiency of rhizobia in soybean. | Han Q, Ma Q, Chen Y, Tian B, Xu L, Bai Y, Chen W, Li X. | ISME J | 10.1038/s41396-020-0648-9 | 2020 | | |
| Metabolism | Hopanoid lipids: from membranes to plant-bacteria interactions. | Belin BJ, Busset N, Giraud E, Molinaro A, Silipo A, Newman DK. | Nat Rev Microbiol | 10.1038/nrmicro.2017.173 | 2018 | |
| Mutagenesis of PhaR, a Regulator Gene of Polyhydroxyalkanoate Biosynthesis of Xanthomonas oryzae pv. oryzae Caused Pleiotropic Phenotype Changes. | Long JY, Song KL, He X, Zhang B, Cui XF, Song CF. | Front Microbiol | 10.3389/fmicb.2018.03046 | 2018 | | |
| Symbiotic Efficiency of Spherical and Elongated Bacteroids in the Aeschynomene-Bradyrhizobium Symbiosis. | Lamouche F, Bonade-Bottino N, Mergaert P, Alunni B. | Front Plant Sci | 10.3389/fpls.2019.00377 | 2019 | | |
| Phylogeny | Characterisation of the symbionts in the Mediterranean fruit fly gut. | Darrington M, Leftwich PT, Holmes NA, Friend LA, Clarke NVE, Worsley SF, Margaritopolous JT, Hogenhout SA, Hutchings MI, Chapman T. | Microb Genom | 10.1099/mgen.0.000801 | 2022 | |
| Growth and Survival of Mesorhizobium loti Inside Acanthamoeba Enhanced Its Ability to Develop More Nodules on Lotus corniculatus. | Karas MA, Turska-Szewczuk A, Trapska D, Urbanik-Sypniewska T. | Microb Ecol | 10.1007/s00248-015-0587-6 | 2015 | | |
| Microbial inoculants: reviewing the past, discussing the present and previewing an outstanding future for the use of beneficial bacteria in agriculture. | Santos MS, Nogueira MA, Hungria M. | AMB Express | 10.1186/s13568-019-0932-0 | 2019 | | |
| A novel function of the key nitrogen-fixation activator NifA in beta-rhizobia: Repression of bacterial auxin synthesis during symbiosis. | Belles-Sancho P, Liu Y, Heiniger B, von Salis E, Eberl L, Ahrens CH, Zamboni N, Bailly A, Pessi G. | Front Plant Sci | 10.3389/fpls.2022.991548 | 2022 | | |
| Phylogeny | Identification and distribution of microsymbionts associated with soybean nodulation in Mozambican soils. | Gyogluu C, Jaiswal SK, Kyei-Boahen S, Dakora FD. | Syst Appl Microbiol | 10.1016/j.syapm.2018.05.003 | 2018 | |
| Characterization of the general stress response in Bartonella henselae. | Tu N, Lima A, Bandeali Z, Anderson B. | Microb Pathog | 10.1016/j.micpath.2015.12.010 | 2016 | | |
| Genetics | Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing. | Leo S, Gaia N, Ruppe E, Emonet S, Girard M, Lazarevic V, Schrenzel J. | Int J Mol Sci | 10.3390/ijms18092011 | 2017 | |
| Molecular Mechanisms of Nanomaterial-Bacterial Interactions Revealed by Omics-The Role of Nanomaterial Effect Level. | Mortimer M, Wang Y, Holden PA. | Front Bioeng Biotechnol | 10.3389/fbioe.2021.683520 | 2021 | | |
| Two Broad Host Range Rhizobial Strains Isolated From Relict Legumes Have Various Complementary Effects on Symbiotic Parameters of Co-inoculated Plants. | Safronova V, Belimov A, Sazanova A, Chirak E, Kuznetsova I, Andronov E, Pinaev A, Tsyganova A, Seliverstova E, Kitaeva A, Tsyganov V, Tikhonovich I. | Front Microbiol | 10.3389/fmicb.2019.00514 | 2019 | | |
| Phylogeny | Phylogeny and distribution of Bradyrhizobium symbionts nodulating cowpea (Vigna unguiculata L. Walp) and their association with the physicochemical properties of acidic African soils. | Puozaa DK, Jaiswal SK, Dakora FD. | Syst Appl Microbiol | 10.1016/j.syapm.2019.02.004 | 2019 | |
| Genetics | Symbiosis island shuffling with abundant insertion sequences in the genomes of extra-slow-growing strains of soybean bradyrhizobia. | Iida T, Itakura M, Anda M, Sugawara M, Isawa T, Okubo T, Sato S, Chiba-Kakizaki K, Minamisawa K. | Appl Environ Microbiol | 10.1128/aem.00741-15 | 2015 | |
| Competition, Nodule Occupancy, and Persistence of Inoculant Strains: Key Factors in the Rhizobium-Legume Symbioses. | Mendoza-Suarez M, Andersen SU, Poole PS, Sanchez-Canizares C. | Front Plant Sci | 10.3389/fpls.2021.690567 | 2021 | | |
| Metabolism | GmYUC2a mediates auxin biosynthesis during root development and nodulation in soybean. | Wang Y, Yang W, Zuo Y, Zhu L, Hastwell AH, Chen L, Tian Y, Su C, Ferguson BJ, Li X. | J Exp Bot | 10.1093/jxb/erz144 | 2019 | |
| Enzymology | Genomic identification and characterization of the elite strains Bradyrhizobium yuanmingense BR 3267 and Bradyrhizobium pachyrhizi BR 3262 recommended for cowpea inoculation in Brazil. | Leite J, Passos SR, Simoes-Araujo JL, Rumjanek NG, Xavier GR, Zilli JE. | Braz J Microbiol | 10.1016/j.bjm.2017.01.007 | 2018 | |
| What Did We Learn From Current Progress in Heat Stress Tolerance in Plants? Can Microbes Be a Solution? | Ahmad M, Imtiaz M, Shoib Nawaz M, Mubeen F, Imran A. | Front Plant Sci | 10.3389/fpls.2022.794782 | 2022 | | |
| Metabolism | Identification of Soybean Genes Whose Expression is Affected by the Ensifer fredii HH103 Effector Protein NopP. | Wang J, Wang J, Liu C, Ma C, Li C, Zhang Y, Qi Z, Zhu R, Shi Y, Zou J, Li Q, Zhu J, Wen Y, Sun Z, Liu H, Jiang H, Yin Z, Hu Z, Chen Q, Wu X, Xin D. | Int J Mol Sci | 10.3390/ijms19113438 | 2018 | |
| Genetics | DNA Methylation in Ensifer Species during Free-Living Growth and during Nitrogen-Fixing Symbiosis with Medicago spp. | diCenzo GC, Cangioli L, Nicoud Q, Cheng JHT, Blow MJ, Shapiro N, Woyke T, Biondi EG, Alunni B, Mengoni A, Mergaert P. | mSystems | 10.1128/msystems.01092-21 | 2022 | |
| Metabolism | Crystal structure of the Vibrio cholerae VqmA-ligand-DNA complex provides insight into ligand-binding mechanisms relevant for drug design. | Wu H, Li M, Guo H, Zhou H, Li B, Xu Q, Xu C, Yu F, He J. | J Biol Chem | 10.1074/jbc.ra118.006082 | 2019 | |
| Identification of two fnr genes and characterisation of their role in the anaerobic switch in Sphingopyxis granuli strain TFA. | Gonzalez-Flores YE, de Dios R, Reyes-Ramirez F, Santero E. | Sci Rep | 10.1038/s41598-020-77927-w | 2020 | | |
| Genetics | Genomic Diversity in the Endosymbiotic Bacterium Rhizobium leguminosarum. | Sanchez-Canizares C, Jorrin B, Duran D, Nadendla S, Albareda M, Rubio-Sanz L, Lanza M, Gonzalez-Guerrero M, Prieto RI, Brito B, Giglio MG, Rey L, Ruiz-Argueso T, Palacios JM, Imperial J. | Genes (Basel) | 10.3390/genes9020060 | 2018 | |
| Effects of Different Chemical Forms of Nitrogen on the Quick and Reversible Inhibition of Soybean Nodule Growth and Nitrogen Fixation Activity. | Yamashita N, Tanabata S, Ohtake N, Sueyoshi K, Sato T, Higuchi K, Saito A, Ohyama T. | Front Plant Sci | 10.3389/fpls.2019.00131 | 2019 | | |
| Metabolism | A proton wire and water channel revealed in the crystal structure of isatin hydrolase. | Bjerregaard-Andersen K, Sommer T, Jensen JK, Jochimsen B, Etzerodt M, Morth JP. | J Biol Chem | 10.1074/jbc.m114.568824 | 2014 | |
| Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine. | Dietler J, Gelfert R, Kaiser J, Borin V, Renzl C, Pilsl S, Ranzani AT, Garcia de Fuentes A, Gleichmann T, Diensthuber RP, Weyand M, Mayer G, Schapiro I, Moglich A. | Nat Commun | 10.1038/s41467-022-30252-4 | 2022 | | |
| Pathogenicity | CeMbio - The Caenorhabditis elegans Microbiome Resource. | Dirksen P, Assie A, Zimmermann J, Zhang F, Tietje AM, Marsh SA, Felix MA, Shapira M, Kaleta C, Schulenburg H, Samuel BS. | G3 (Bethesda) | 10.1534/g3.120.401309 | 2020 | |
| Competition Experiments for Legume Infection Identify Burkholderia phymatum as a Highly Competitive beta-Rhizobium. | Lardi M, de Campos SB, Purtschert G, Eberl L, Pessi G. | Front Microbiol | 10.3389/fmicb.2017.01527 | 2017 | | |
| Designing and Engineering Methylorubrum extorquens AM1 for Itaconic Acid Production. | Lim CK, Villada JC, Chalifour A, Duran MF, Lu H, Lee PKH. | Front Microbiol | 10.3389/fmicb.2019.01027 | 2019 | | |
| GmZPR3d Interacts with GmHD-ZIP III Proteins and Regulates Soybean Root and Nodule Vascular Development. | Damodaran S, Dubois A, Xie J, Ma Q, Hindie V, Subramanian S. | Int J Mol Sci | 10.3390/ijms20040827 | 2019 | | |
| Deletion of rRNA Operons of Sinorhizobium fredii Strain NGR234 and Impact on Symbiosis With Legumes. | Cherni AE, Perret X. | Front Microbiol | 10.3389/fmicb.2019.00154 | 2019 | | |
| Metabolism | Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function. | Good NM, Fellner M, Demirer K, Hu J, Hausinger RP, Martinez-Gomez NC. | J Biol Chem | 10.1074/jbc.ra120.013227 | 2020 | |
| The CopA2-Type P1B-Type ATPase CcoI Serves as Central Hub for cbb 3-Type Cytochrome Oxidase Biogenesis. | Andrei A, Di Renzo MA, Ozturk Y, Meisner A, Daum N, Frank F, Rauch J, Daldal F, Andrade SLA, Koch HG. | Front Microbiol | 10.3389/fmicb.2021.712465 | 2021 | | |
| Phylogeny | Phylogenetically diverse group of native bacterial symbionts isolated from root nodules of groundnut (Arachis hypogaea L.) in South Africa. | Jaiswal SK, Msimbira LA, Dakora FD. | Syst Appl Microbiol | 10.1016/j.syapm.2017.02.002 | 2017 | |
| Enzymology | The spermidine acetyltransferase SpeG regulates transcription of the small RNA rprA. | Hu LI, Filippova EV, Dang J, Pshenychnyi S, Ruan J, Kiryukhina O, Anderson WF, Kuhn ML, Wolfe AJ. | PLoS One | 10.1371/journal.pone.0207563 | 2018 | |
| Structural Basis of Dual Specificity of Sinorhizobium meliloti Clr, a cAMP and cGMP Receptor Protein. | Werel L, Farmani N, Krol E, Serrania J, Essen LO, Becker A. | mBio | 10.1128/mbio.03028-22 | 2023 | | |
| Gene Silencing of Argonaute5 Negatively Affects the Establishment of the Legume-Rhizobia Symbiosis. | Reyero-Saavedra MDR, Qiao Z, Sanchez-Correa MDS, Diaz-Pineda ME, Reyes JL, Covarrubias AA, Libault M, Valdes-Lopez O. | Genes (Basel) | 10.3390/genes8120352 | 2017 | | |
| Metabolism | Anaerobic Degradation of Syringic Acid by an Adapted Strain of Rhodopseudomonas palustris. | Oshlag JZ, Ma Y, Morse K, Burger BT, Lemke RA, Karlen SD, Myers KS, Donohue TJ, Noguera DR. | Appl Environ Microbiol | 10.1128/aem.01888-19 | 2020 | |
| Effects of Bacillus velezensis FKM10 for Promoting the Growth of Malus hupehensis Rehd. and Inhibiting Fusarium verticillioides. | Wang C, Zhao D, Qi G, Mao Z, Hu X, Du B, Liu K, Ding Y. | Front Microbiol | 10.3389/fmicb.2019.02889 | 2019 | | |
| Type 3 Secretion System (T3SS) of Bradyrhizobium sp. DOA9 and Its Roles in Legume Symbiosis and Rice Endophytic Association. | Songwattana P, Noisangiam R, Teamtisong K, Prakamhang J, Teulet A, Tittabutr P, Piromyou P, Boonkerd N, Giraud E, Teaumroong N. | Front Microbiol | 10.3389/fmicb.2017.01810 | 2017 | | |
| Metabolism | PhaR, a Negative Regulator of PhaP, Modulates the Colonization of a Burkholderia Gut Symbiont in the Midgut of the Host Insect, Riptortus pedestris. | Jang SH, Jang HA, Lee J, Kim JU, Lee SA, Park KE, Kim BH, Jo YH, Lee BL. | Appl Environ Microbiol | 10.1128/aem.00459-17 | 2017 | |
| Enzymology | Phosphorelay through the bifunctional phosphotransferase PhyT controls the general stress response in an alphaproteobacterium. | Gottschlich L, Bortfeld-Miller M, Gabelein C, Dintner S, Vorholt JA. | PLoS Genet | 10.1371/journal.pgen.1007294 | 2018 | |
| Transcriptome | From Intracellular Bacteria to Differentiated Bacteroids: Transcriptome and Metabolome Analysis in Aeschynomene Nodules Using the Bradyrhizobium sp. Strain ORS285 bclA Mutant. | Lamouche F, Chaumeret A, Guefrachi I, Barriere Q, Pierre O, Guerard F, Gilard F, Giraud E, Dessaux Y, Gakiere B, Timchenko T, Kereszt A, Mergaert P, Alunni B. | J Bacteriol | 10.1128/jb.00191-19 | 2019 | |
| Phylogeny | Phylogenetic distribution and evolutionary dynamics of nod and T3SS genes in the genus Bradyrhizobium. | Teulet A, Gully D, Rouy Z, Camuel A, Koebnik R, Giraud E, Lassalle F. | Microb Genom | 10.1099/mgen.0.000407 | 2020 | |
| Genetics | The combination of functional metagenomics and an oil-fed enrichment strategy revealed the phylogenetic diversity of lipolytic bacteria overlooked by the cultivation-based method. | Narihiro T, Suzuki A, Yoshimune K, Hori T, Hoshino T, Yumoto I, Yokota A, Kimura N, Kamagata Y. | Microbes Environ | 10.1264/jsme2.me14002 | 2014 | |
| Nano-Enable Materials Promoting Sustainability and Resilience in Modern Agriculture. | Ur Rahim H, Qaswar M, Uddin M, Giannini C, Herrera ML, Rea G. | Nanomaterials (Basel) | 10.3390/nano11082068 | 2021 | | |
| Metabolism | Towards sustainable bioplastic production using the photoautotrophic bacterium Rhodopseudomonas palustris TIE-1. | Ranaivoarisoa TO, Singh R, Rengasamy K, Guzman MS, Bose A. | J Ind Microbiol Biotechnol | 10.1007/s10295-019-02165-7 | 2019 | |
| Metabolism | Coordinated Regulation of the Size and Number of Polyhydroxybutyrate Granules by Core and Accessory Phasins in the Facultative Microsymbiont Sinorhizobium fredii NGR234. | Sun YW, Li Y, Hu Y, Chen WX, Tian CF. | Appl Environ Microbiol | 10.1128/aem.00717-19 | 2019 | |
| Metabolism | PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper. | Fisher OS, Sendzik MR, Ross MO, Lawton TJ, Hoffman BM, Rosenzweig AC. | J Biol Chem | 10.1074/jbc.ra119.010093 | 2019 | |
| Pathogenicity | A transcriptomic analysis of the effect of genistein on Sinorhizobium fredii HH103 reveals novel rhizobial genes putatively involved in symbiosis. | Perez-Montano F, Jimenez-Guerrero I, Acosta-Jurado S, Navarro-Gomez P, Ollero FJ, Ruiz-Sainz JE, Lopez-Baena FJ, Vinardell JM. | Sci Rep | 10.1038/srep31592 | 2016 | |
| Metabolism | Genetic Analysis Reveals the Essential Role of Nitrogen Phosphotransferase System Components in Sinorhizobium fredii CCBAU 45436 Symbioses with Soybean and Pigeonpea Plants. | Li YZ, Wang D, Feng XY, Jiao J, Chen WX, Tian CF. | Appl Environ Microbiol | 10.1128/aem.03454-15 | 2016 | |
| Metabolism | OlsG (Sinac_1600) Is an Ornithine Lipid N-Methyltransferase from the Planctomycete Singulisphaera acidiphila. | Escobedo-Hinojosa WI, Vences-Guzman MA, Schubotz F, Sandoval-Calderon M, Summons RE, Lopez-Lara IM, Geiger O, Sohlenkamp C. | J Biol Chem | 10.1074/jbc.m115.639575 | 2015 | |
| Resource acquisition and allocation traits in symbiotic rhizobia with implications for life-history outside of legume hosts. | Muller KE, Denison RF. | R Soc Open Sci | 10.1098/rsos.181124 | 2018 | | |
| Phylogeny | Differing courses of genetic evolution of Bradyrhizobium inoculants as revealed by long-term molecular tracing in Acacia mangium plantations. | Perrineau MM, Le Roux C, Galiana A, Faye A, Duponnois R, Goh D, Prin Y, Bena G. | Appl Environ Microbiol | 10.1128/aem.02007-14 | 2014 | |
| Metabolism | Structural basis and mechanism for metallochaperone-assisted assembly of the CuA center in cytochrome oxidase. | Canonica F, Klose D, Ledermann R, Sauer MM, Abicht HK, Quade N, Gossert AD, Chesnov S, Fischer HM, Jeschke G, Hennecke H, Glockshuber R. | Sci Adv | 10.1126/sciadv.aaw8478 | 2019 | |
| Phylogeny | Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream. | Boeckmann B, Marcet-Houben M, Rees JA, Forslund K, Huerta-Cepas J, Muffato M, Yilmaz P, Xenarios I, Bork P, Lewis SE, Gabaldon T, Quest for Orthologs Species Tree Working Group. | Genome Biol Evol | 10.1093/gbe/evv121 | 2015 | |
| Metabolism | Molecular features of steroid-binding antidins and their use for assaying serum progesterone. | Agrawal N, Lehtonen SI, Uusi-Makela M, Jain P, Viitala S, Maatta JAE, Kahkonen N, Azizi L, Riihimaki TA, Kulomaa MS, Johnson MS, Hytonen VP, Airenne TT. | PLoS One | 10.1371/journal.pone.0212339 | 2019 | |
| Metabolism | Elucidation of gibberellin biosynthesis in bacteria reveals convergent evolution. | Nett RS, Montanares M, Marcassa A, Lu X, Nagel R, Charles TC, Hedden P, Rojas MC, Peters RJ. | Nat Chem Biol | 10.1038/nchembio.2232 | 2017 | |
| Abundance and diversity of soybean-nodulating rhizobia in black soil are impacted by land use and crop management. | Yan J, Han XZ, Ji ZJ, Li Y, Wang ET, Xie ZH, Chen WF. | Appl Environ Microbiol | 10.1128/aem.01135-14 | 2014 | | |
| Metabolism | The Paracoccus denitrificans NarK-like nitrate and nitrite transporters-probing nitrate uptake and nitrate/nitrite exchange mechanisms. | Goddard AD, Bali S, Mavridou DA, Luque-Almagro VM, Gates AJ, Dolores Roldan M, Newstead S, Richardson DJ, Ferguson SJ. | Mol Microbiol | 10.1111/mmi.13546 | 2017 | |
| The Modification of Regulatory Circuits Involved in the Control of Polyhydroxyalkanoates Metabolism to Improve Their Production. | Velazquez-Sanchez C, Espin G, Pena C, Segura D. | Front Bioeng Biotechnol | 10.3389/fbioe.2020.00386 | 2020 | | |
| Genetics | Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome. | Anda M, Ohtsubo Y, Okubo T, Sugawara M, Nagata Y, Tsuda M, Minamisawa K, Mitsui H. | Proc Natl Acad Sci U S A | 10.1073/pnas.1514326112 | 2015 | |
| Sinorhizobium fredii Strains HH103 and NGR234 Form Nitrogen Fixing Nodules With Diverse Wild Soybeans (Glycine soja) From Central China but Are Ineffective on Northern China Accessions. | Temprano-Vera F, Rodriguez-Navarro DN, Acosta-Jurado S, Perret X, Fossou RK, Navarro-Gomez P, Zhen T, Yu D, An Q, Buendia-Claveria AM, Moreno J, Lopez-Baena FJ, Ruiz-Sainz JE, Vinardell JM. | Front Microbiol | 10.3389/fmicb.2018.02843 | 2018 | | |
| Enzymology | Generation of a rabbit single-chain fragment variable (scFv) antibody for specific detection of Bradyrhizobium sp. DOA9 in both free-living and bacteroid forms. | Vu NX, Pruksametanan N, Srila W, Yuttavanichakul W, Teamtisong K, Teaumroong N, Boonkerd N, Tittabutr P, Yamabhai M. | PLoS One | 10.1371/journal.pone.0179983 | 2017 | |
| Proteome | The Wolbachia WO bacteriophage proteome in the Aedes albopictus C/wStr1 cell line: evidence for lytic activity? | Baldridge GD, Markowski TW, Witthuhn BA, Higgins L, Baldridge AS, Fallon AM. | In Vitro Cell Dev Biol Anim | 10.1007/s11626-015-9949-0 | 2016 | |
| Enzymology | Endophytic Microbial Consortia of Phytohormones-Producing Fungus Paecilomyces formosus LHL10 and Bacteria Sphingomonas sp. LK11 to Glycine max L. Regulates Physio-hormonal Changes to Attenuate Aluminum and Zinc Stresses. | Bilal S, Shahzad R, Khan AL, Kang SM, Imran QM, Al-Harrasi A, Yun BW, Lee IJ. | Front Plant Sci | 10.3389/fpls.2018.01273 | 2018 | |
| Metabolism | Most Sinorhizobium meliloti Extracytoplasmic Function Sigma Factors Control Accessory Functions. | Lang C, Barnett MJ, Fisher RF, Smith LS, Diodati ME, Long SR. | mSphere | 10.1128/mspheredirect.00454-18 | 2018 | |
| Gene network analysis identifies a central post-transcriptional regulator of cellular stress survival. | Tien M, Fiebig A, Crosson S. | Elife | 10.7554/elife.33684 | 2018 | | |
| Transcriptome Analysis of Polyhydroxybutyrate Cycle Mutants Reveals Discrete Loci Connecting Nitrogen Utilization and Carbon Storage in Sinorhizobium meliloti. | D'Alessio M, Nordeste R, Doxey AC, Charles TC. | mSystems | 10.1128/msystems.00035-17 | 2017 | | |
| Genetics | Comparative Genomics Reveal a Flagellar System, a Type VI Secretion System and Plant Growth-Promoting Gene Clusters Unique to the Endophytic Bacterium Kosakonia radicincitans. | Becker M, Patz S, Becker Y, Berger B, Drungowski M, Bunk B, Overmann J, Sproer C, Reetz J, Tchuisseu Tchakounte GV, Ruppel S. | Front Microbiol | 10.3389/fmicb.2018.01997 | 2018 | |
| Molecular evolution of cytochrome bd oxidases across proteobacterial genomes. | Degli Esposti M, Rosas-Perez T, Servin-Garciduenas LE, Bolanos LM, Rosenblueth M, Martinez-Romero E. | Genome Biol Evol | 10.1093/gbe/evv032 | 2015 | | |
| The complete genome of Burkholderia phenoliruptrix strain BR3459a, a symbiont of Mimosa flocculosa: highlighting the coexistence of symbiotic and pathogenic genes. | Zuleta LF, Cunha Cde O, de Carvalho FM, Ciapina LP, Souza RC, Mercante FM, de Faria SM, Baldani JI, Straliotto R, Hungria M, de Vasconcelos AT. | BMC Genomics | 10.1186/1471-2164-15-535 | 2014 | | |
| Stress | Whole-Genome Resequencing of Spontaneous Oxidative Stress-Resistant Mutants Reveals an Antioxidant System of Bradyrhizobium japonicum Involved in Soybean Colonization. | Liebrenz K, Gomez C, Brambilla S, Frare R, Stritzler M, Maguire V, Ruiz O, Soldini D, Pascuan C, Soto G, Ayub N | Microb Ecol | 10.1007/s00248-021-01925-2 | 2021 | |
| Transcriptome | Transposon sequencing analysis of Bradyrhizobium diazoefficiens 110spc4. | Baraquet C, Dai W, Mendiola J, Pechter K, Harwood CS | Sci Rep | 10.1038/s41598-021-92534-z | 2021 | |
| Root Nodule Rhizobia From Undomesticated Shrubs of the Dry Woodlands of Southern Africa Can Nodulate Angolan Teak Pterocarpus angolensis, an Important Source of Timber. | Bunger W, Sarkar A, Gronemeyer JL, Zielinski J, Revermann R, Hurek T, Reinhold-Hurek B | Front Microbiol | 10.3389/fmicb.2021.611704 | 2021 | | |
| Dual-luciferase assay and siRNA silencing for nodD1 to study the competitiveness of Bradyrhizobium diazoefficiens USDA110 in soybean nodulation. | Ramongolalaina C | Microbiol Res | 10.1016/j.micres.2020.126488 | 2020 | | |
| Co-Inoculation of Bacillus velezensis Strain S141 and Bradyrhizobium Strains Promotes Nodule Growth and Nitrogen Fixation. | Sibponkrung S, Kondo T, Tanaka K, Tittabutr P, Boonkerd N, Yoshida KI, Teaumroong N | Microorganisms | 10.3390/microorganisms8050678 | 2020 | | |
| Phylogeny | Novel rhizobia exhibit superior nodulation and biological nitrogen fixation even under high nitrate concentrations. | Nguyen HP, Miwa H, Obirih-Opareh J, Suzaki T, Yasuda M, Okazaki S | FEMS Microbiol Ecol | 10.1093/femsec/fiz184 | 2020 | |
| Metabolism | An Alkane Sulfonate Monooxygenase Is Required for Symbiotic Nitrogen Fixation by Bradyrhizobium diazoefficiens (syn. Bradyrhizobium japonicum) USDA110(T). | Speck JJ, James EK, Sugawara M, Sadowsky MJ, Gyaneshwar P | Appl Environ Microbiol | 10.1128/AEM.01552-19 | 2019 | |
| [Biological characteristics of bacteriophages infecting three typic rhizobia of legume]. | Liu JJ, Liu ZX, Yu H, Yao Q, Yu ZH, Wang GH | Ying Yong Sheng Tai Xue Bao | 10.13287/j.1001-9332.201908.029 | 2019 | | |
| Metabolism | Brazilian-adapted soybean Bradyrhizobium strains uncover IS elements with potential impact on biological nitrogen fixation. | Barros-Carvalho GA, Hungria M, Lopes FM, Van Sluys MA | FEMS Microbiol Lett | 10.1093/femsle/fnz046 | 2019 | |
| Metabolism | Classical Soybean (Glycine max (L.) Merr) Symbionts, Sinorhizobium fredii USDA191 and Bradyrhizobium diazoefficiens USDA110, Reveal Contrasting Symbiotic Phenotype on Pigeon Pea (Cajanus cajan (L.) Millsp). | Alaswad AA, Oehrle NW, Krishnan HB | Int J Mol Sci | 10.3390/ijms20051091 | 2019 | |
| Metabolism | Analysis of the denitrification pathway and greenhouse gases emissions in Bradyrhizobium sp. strains used as biofertilizers in South America. | Obando M, Correa-Galeote D, Castellano-Hinojosa A, Gualpa J, Hidalgo A, Alche JD, Bedmar E, Cassan F | J Appl Microbiol | 10.1111/jam.14233 | 2019 | |
| Metabolism | An Amidase Gene, ipaH, Is Responsible for the Initial Step in the Iprodione Degradation Pathway of Paenarthrobacter sp. Strain YJN-5. | Yang Z, Jiang W, Wang X, Cheng T, Zhang D, Wang H, Qiu J, Cao L, Wang X, Hong Q | Appl Environ Microbiol | 10.1128/AEM.01150-18 | 2018 | |
| Stress | The genomes of three Bradyrhizobium sp. isolated from root nodules of Lupinus albescens grown in extremely poor soils display important genes for resistance to environmental stress. | Granada CE, Vargas LK, Sant'Anna FH, Balsanelli E, Baura VA, Oliveira Pedrosa F, Souza EM, Falcon T, Passaglia LMP | Genet Mol Biol | 10.1590/1678-4685-GMB-2017-0098 | 2018 | |
| Metabolism | Characterization of a novel MIIA domain-containing protein (MdcE) in Bradyrhizobium spp. | Duran D, Imperial J, Palacios J, Ruiz-Argueso T, Gottfert M, Zehner S, Rey L | FEMS Microbiol Lett | 10.1093/femsle/fnx276 | 2018 | |
| Genetics | Genome Sequence of Bacillus velezensis S141, a New Strain of Plant Growth-Promoting Rhizobacterium Isolated from Soybean Rhizosphere. | Sibponkrung S, Kondo T, Tanaka K, Tittabutr P, Boonkerd N, Teaumroong N, Yoshida KI | Genome Announc | 10.1128/genomeA.01312-17 | 2017 | |
| Nonspecific Symbiosis Between Sophora flavescens and Different Rhizobia. | Liu YH, Jiao YS, Liu LX, Wang D, Tian CF, Wang ET, Wang L, Chen WX, Wu SY, Guo BL, Guan ZG, Poinsot V, Chen WF | Mol Plant Microbe Interact | 10.1094/MPMI-05-17-0117-R | 2017 | | |
| Bradyrhizobium elkanii nod regulon: insights through genomic analysis. | Passaglia LMP | Genet Mol Biol | 10.1590/1678-4685-GMB-2016-0228 | 2017 | | |
| Metabolism | Improvement in nitrogen fixation capacity could be part of the domestication process in soybean. | Munoz N, Qi X, Li MW, Xie M, Gao Y, Cheung MY, Wong FL, Lam HM | Heredity (Edinb) | 10.1038/hdy.2016.27 | 2016 | |
| Metabolism | Stable Fluorescent and Enzymatic Tagging of Bradyrhizobium diazoefficiens to Analyze Host-Plant Infection and Colonization. | Ledermann R, Bartsch I, Remus-Emsermann MN, Vorholt JA, Fischer HM | Mol Plant Microbe Interact | 10.1094/MPMI-03-15-0054-TA | 2015 | |
| Enzymology | Preferential association of endophytic bradyrhizobia with different rice cultivars and its implications for rice endophyte evolution. | Piromyou P, Greetatorn T, Teamtisong K, Okubo T, Shinoda R, Nuntakij A, Tittabutr P, Boonkerd N, Minamisawa K, Teaumroong N | Appl Environ Microbiol | 10.1128/AEM.04253-14 | 2015 | |
| Genetics | Comparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7: elite model strains for understanding symbiotic performance with soybean. | Siqueira AF, Ormeno-Orrillo E, Souza RC, Rodrigues EP, Almeida LG, Barcellos FG, Batista JS, Nakatani AS, Martinez-Romero E, Vasconcelos AT, Hungria M | BMC Genomics | 10.1186/1471-2164-15-420 | 2014 | |
| Biotechnological potential of rhizobial metabolites to enhance the performance of Bradyrhizobium spp. and Azospirillum brasilense inoculants with soybean and maize. | Marks BB, Megias M, Nogueira MA, Hungria M | AMB Express | 10.1186/2191-0855-3-21 | 2013 | | |
| Identification of an Exopolysaccharide Biosynthesis Gene in Bradyrhizobium diazoefficiens USDA110. | Xu C, Ruan H, Cai W, Staehelin C, Dai W | Microorganisms | 10.3390/microorganisms9122490 | 2021 | | |
| Rhizobium Symbiotic Capacity Shapes Root-Associated Microbiomes in Soybean. | Liu Y, Ma B, Chen W, Schlaeppi K, Erb M, Stirling E, Hu L, Wang E, Zhang Y, Zhao K, Lu Z, Ye S, Xu J | Front Microbiol | 10.3389/fmicb.2021.709012 | 2021 | | |
| Metabolism | Computationally Reconstructed Interactome of Bradyrhizobium diazoefficiens USDA110 Reveals Novel Functional Modules and Protein Hubs for Symbiotic Nitrogen Fixation. | Ma JX, Yang Y, Li G, Ma BG | Int J Mol Sci | 10.3390/ijms222111907 | 2021 | |
| Genetics | Comparative Analysis of Three Bradyrhizobium diazoefficiens Genomes Show Specific Mutations Acquired during Selection for a Higher Motility Phenotype and Adaption to Laboratory Conditions. | Lozano MJ, Redondo-Nieto M, Garrido-Sanz D, Mongiardini E, Quelas JI, Mengucci F, Dardis C, Lodeiro A, Althabegoiti MJ | Microbiol Spectr | 10.1128/Spectrum.00569-21 | 2021 | |
| Transcriptome | The Bradyrhizobium diazoefficiens type III effector NopE modulates the regulation of plant hormones towards nodulation in Vigna radiata. | Piromyou P, Nguyen HP, Songwattana P, Boonchuen P, Teamtisong K, Tittabutr P, Boonkerd N, Alisha Tantasawat P, Gottfert M, Okazaki S, Teaumroong N | Sci Rep | 10.1038/s41598-021-95925-4 | 2021 | |
| Stress | Enhancing the Efficiency of Soybean Inoculant for Nodulation under Multi-Environmental Stress Conditions. | Wongdee J, Yuttavanichakul W, Longthonglang A, Teamtisong K, Boonkerd N, Teaumroong N, Tittabutr P | Pol J Microbiol | 10.33073/pjm-2021-024 | 2021 | |
| Metabolism | The inhibitory mechanism of natural soil colloids on the biodegradation of polychlorinated biphenyls by a degrading bacterium. | Li R, Ren W, Teng Y, Sun Y, Xu Y, Zhao L, Wang X, Christie P, Luo Y | J Hazard Mater | 10.1016/j.jhazmat.2021.125687 | 2021 | |
| Bradyrhizobium diazoefficiens USDA110 Nodulation of Aeschynomene afraspera Is Associated with Atypical Terminal Bacteroid Differentiation and Suboptimal Symbiotic Efficiency. | Nicoud Q, Lamouche F, Chaumeret A, Balliau T, Le Bars R, Bourge M, Pierre F, Guerard F, Sallet E, Tuffigo S, Pierre O, Dessaux Y, Gilard F, Gakiere B, Nagy I, Kereszt A, Zivy M, Mergaert P, Gourion B, Alunni B | mSystems | 10.1128/mSystems.01237-20 | 2021 | | |
| Site-directed mutagenesis of Bradyrhizobium diazoefficiens USDA 110 aroA improves bacterial growth and competitiveness for soybean nodulation in the presence of glyphosate. | Quelas JI, Lastra RA, Lorenze C, Escobar M, Lepek VC | Environ Microbiol Rep | 10.1111/1758-2229.12917 | 2020 | | |
| Pathogenicity | Whole-Genome Sequencing of Bradyrhizobium diazoefficiens 113-2 and Comparative Genomic Analysis Provide Molecular Insights Into Species Specificity and Host Specificity. | Li R, Feng Y, Chen H, Zhang C, Huang Y, Chen L, Hao Q, Cao D, Yuan S, Zhou X | Front Microbiol | 10.3389/fmicb.2020.576800 | 2020 | |
| Metabolism | Involvement of a Novel TetR-Like Regulator (BdtR) of Bradyrhizobium diazoefficiens in the Efflux of Isoflavonoid Genistein. | Han F, He X, Chen W, Gai H, Bai X, He Y, Takeshima K, Ohwada T, Wei M, Xie F | Mol Plant Microbe Interact | 10.1094/MPMI-08-20-0243-R | 2020 | |
| Mycorrhizal networks facilitate the colonization of legume roots by a symbiotic nitrogen-fixing bacterium. | de Novais CB, Sbrana C, da Conceicao Jesus E, Rouws LFM, Giovannetti M, Avio L, Siqueira JO, Saggin Junior OJ, da Silva EMR, de Faria SM | Mycorrhiza | 10.1007/s00572-020-00948-w | 2020 | | |
| Metabolism | Divergent metabolic adjustments in nodules are indispensable for efficient N2 fixation of soybean under phosphate stress. | Sulieman S, Kusano M, Ha CV, Watanabe Y, Abdalla MA, Abdelrahman M, Kobayashi M, Saito K, Muhling KH, Tran LP | Plant Sci | 10.1016/j.plantsci.2019.110249 | 2019 | |
| Enzymology | Lanthanide-dependent methanol dehydrogenase from the legume symbiotic nitrogen-fixing bacterium Bradyrhizobium diazoefficiens strain USDA110. | Wang L, Suganuma S, Hibino A, Mitsui R, Tani A, Matsumoto T, Ebihara A, Fitriyanto NA, Pertiwiningrum A, Shimada M, Hayakawa T, Nakagawa T | Enzyme Microb Technol | 10.1016/j.enzmictec.2019.109371 | 2019 | |
| Metabolism | Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants. | Chekan JR, Ongpipattanakul C, Wright TR, Zhang B, Bollinger JM Jr, Rajakovich LJ, Krebs C, Cicchillo RM, Nair SK | Proc Natl Acad Sci U S A | 10.1073/pnas.1900711116 | 2019 | |
| An Integrated Systems Approach Unveils New Aspects of Microoxia-Mediated Regulation in Bradyrhizobium diazoefficiens. | Fernandez N, Cabrera JJ, Varadarajan AR, Lutz S, Ledermann R, Roschitzki B, Eberl L, Bedmar EJ, Fischer HM, Pessi G, Ahrens CH, Mesa S | Front Microbiol | 10.3389/fmicb.2019.00924 | 2019 | | |
| Phylogenomic Analyses of Bradyrhizobium Reveal Uneven Distribution of the Lateral and Subpolar Flagellar Systems, Which Extends to Rhizobiales. | Garrido-Sanz D, Redondo-Nieto M, Mongiardini E, Blanco-Romero E, Duran D, Quelas JI, Martin M, Rivilla R, Lodeiro AR, Althabegoiti MJ | Microorganisms | 10.3390/microorganisms7020050 | 2019 | | |
| Evaluation of Immune Responses Induced by Simultaneous Inoculations of Soybean (Glycine max [L.] Merr.) with Soil Bacteria and Rhizobia. | Hashami SZ, Nakamura H, Ohkama-Ohtsu N, Kojima K, Djedidi S, Fukuhara I, Haidari MD, Sekimoto H, Yokoyama T | Microbes Environ | 10.1264/jsme2.ME18110 | 2019 | | |
| Metabolism | Bradyrhizobium diazoefficiens USDA110 PhaR functions for pleiotropic regulation of cellular processes besides PHB accumulation. | Nishihata S, Kondo T, Tanaka K, Ishikawa S, Takenaka S, Kang CM, Yoshida KI | BMC Microbiol | 10.1186/s12866-018-1317-2 | 2018 | |
| Metabolism | Bradyrhizobium diazoefficiens USDA 110- Glycine max Interactome Provides Candidate Proteins Associated with Symbiosis. | Zhang L, Liu JY, Gu H, Du Y, Zuo JF, Zhang Z, Zhang M, Li P, Dunwell JM, Cao Y, Zhang Z, Zhang YM | J Proteome Res | 10.1021/acs.jproteome.8b00209 | 2018 | |
| Enzymology | Symbiotic characteristics of Bradyrhizobium diazoefficiens USDA 110 mutants associated with shrubby sophora (Sophora flavescens) and soybean (Glycine max). | Liu YH, Wang ET, Jiao YS, Tian CF, Wang L, Wang ZJ, Guan JJ, Singh RP, Chen WX, Chen WF | Microbiol Res | 10.1016/j.micres.2018.05.012 | 2018 | |
| Metabolism | Integrated roles of BclA and DD-carboxypeptidase 1 in Bradyrhizobium differentiation within NCR-producing and NCR-lacking root nodules. | Barriere Q, Guefrachi I, Gully D, Lamouche F, Pierre O, Fardoux J, Chaintreuil C, Alunni B, Timchenko T, Giraud E, Mergaert P | Sci Rep | 10.1038/s41598-017-08830-0 | 2017 | |
| Metabolism | Construction and simulation of the Bradyrhizobium diazoefficiens USDA110 metabolic network: a comparison between free-living and symbiotic states. | Yang Y, Hu XP, Ma BG | Mol Biosyst | 10.1039/c6mb00553e | 2017 | |
| Metabolism | Mitigation of soil N2O emission by inoculation with a mixed culture of indigenous Bradyrhizobium diazoefficiens. | Akiyama H, Hoshino YT, Itakura M, Shimomura Y, Wang Y, Yamamoto A, Tago K, Nakajima Y, Minamisawa K, Hayatsu M | Sci Rep | 10.1038/srep32869 | 2016 | |
| Growth Rate of and Gene Expression in Bradyrhizobium diazoefficiens USDA110 due to a Mutation in blr7984, a TetR Family Transcriptional Regulator Gene. | Ohkama-Ohtsu N, Honma H, Nakagome M, Nagata M, Yamaya-Ito H, Sano Y, Hiraoka N, Ikemi T, Suzuki A, Okazaki S, Minamisawa K, Yokoyama T | Microbes Environ | 10.1264/jsme2.ME16056 | 2016 | | |
| Metabolism | Identification of the Hydrogen Uptake Gene Cluster for Chemolithoautotrophic Growth and Symbiosis Hydrogen Uptake in Bradyrhizobium Diazoefficiens. | Masuda S, Saito M, Sugawara C, Itakura M, Eda S, Minamisawa K | Microbes Environ | 10.1264/jsme2.ME15182 | 2016 | |
| Phylogeny | The tight-adhesion proteins TadGEF of Bradyrhizobium diazoefficiens USDA 110 are involved in cell adhesion and infectivity on soybean roots. | Mongiardini EJ, Parisi GD, Quelas JI, Lodeiro AR | Microbiol Res | 10.1016/j.micres.2015.10.001 | 2015 | |
| Genetic and Physiological Characterization of Soybean-Nodule-Derived Isolates from Bangladeshi Soils Revealed Diverse Array of Bacteria with Potential Bradyrhizobia for Biofertilizers. | Mortuza MF, Djedidi S, Ito T, Agake SI, Sekimoto H, Yokoyama T, Okazaki S, Ohkama-Ohtsu N | Microorganisms | 10.3390/microorganisms10112282 | 2022 | | |
| Transcriptome | Identification of sigma factor 54-regulated small non-coding RNAs by employing genome-wide and transcriptome-based methods in rhizobium strains. | Rajendran K, Kumar V, Raja I, Kumariah M, Tennyson J | 3 Biotech | 10.1007/s13205-022-03394-x | 2022 | |
| Genetics | Bradyrhizobium tunisiense sp. nov., a novel rhizobial species isolated from Acacia saligna nodules. | Hsouna J, Zouagui H, Gritli T, Ilahi H, Han JC, Sulman M, Ellouze W, Zhang XX, Mansouri M, Missbah El Idrissi M, Alami S, Courty PE, Wipf D, Bekki A, Tambong JT, Mnasri B. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006807 | 2025 | |
| Phylogeny | Bradyrhizobium niftali sp. nov., an effective nitrogen-fixing symbiont of partridge pea [Chamaecrista fasciculata (Michx.) Greene], a native caesalpinioid legume broadly distributed in the USA. | Klepa MS, Urquiaga MCO, Somasegaran P, Delamuta JRM, Ribeiro RA, Hungria M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003640 | 2019 | |
| Phylogeny | Strains of Bradyrhizobium cosmicum sp. nov., isolated from contrasting habitats in Japan and Canada possess photosynthesis gene clusters with the hallmark of genomic islands. | Wasai-Hara S, Minamisawa K, Cloutier S, Bromfield ESP. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004380 | 2020 | |
| Transcriptome | Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea. | Muema EK, van Lill M, Venter SN, Chan WY, Claassens R, Steenkamp ET. | Antonie Van Leeuwenhoek | 10.1007/s10482-025-02063-2 | 2025 | |
| Phylogeny | Polyphasic evidence supporting the reclassification of Bradyrhizobium japonicum group Ia strains as Bradyrhizobium diazoefficiens sp. nov. | Delamuta JRM, Ribeiro RA, Ormeno-Orrillo E, Melo IS, Martinez-Romero E, Hungria M | Int J Syst Evol Microbiol | 10.1099/ijs.0.049130-0 | 2013 | |
| Phylogeny | Bradyrhizobium septentrionale sp. nov. (sv. septentrionale) and Bradyrhizobium quebecense sp. nov. (sv. septentrionale) associated with legumes native to Canada possess rearranged symbiosis genes and numerous insertion sequences. | Bromfield ESP, Cloutier S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004831 | 2021 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive133983.20260601.11
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
License