Christiangramia aestuarii (KACC 16188, JCM 17790, BS12)

Name: Christiangramia aestuarii (KACC 16188, JCM 17790, BS12)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133966

Type strain

Strain Designation BS12

Culture col. no. KACC 16188 JCM 17790 BS12

NCBI tax ID(s) 1028746

Special Collections JCM Literature strains

History JCM <-- C. O. Jeon BS12.

Links

Christiangramia aestuarii BS12 is an aerobe, Gram-negative, motile bacterium that was isolated from tidal flat.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 28059

JCM 17790

@ref 20215

Last LPSN update 2026-05-29 08:38:13

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Christiangramia

Species Christiangramia aestuarii

Full scientific name Christiangramia aestuarii (Jeong et al. 2013) Deshmukh and Oren 2023

Synonyms (1)

Gramella aestuarii

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
30970	negative	2.5 µm	0.6 µm	rod-shaped		gliding

Pigmentation

30970

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30970	positive	growth	05-40
30970	positive	optimum	25
67770	positive	growth	25

Culture pH

@ref	Ability	Type	PH	PH range
30970	positive	optimum	7.25
30970	positive	growth	5.5-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

30970

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
30970
125439		90.516

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30970	NaCl	positive	growth	1.0-11.0 %
30970	NaCl	positive	optimum	3 %

Observation

30970

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30970	28644 ChEBI	2-oxopentanoate	+	carbon source
30970	30089 ChEBI	acetate	+	carbon source
30970	16449 ChEBI	alanine	+	carbon source
30970	40585 ChEBI	alpha-cyclodextrin	+	carbon source
30970	35391 ChEBI	aspartate	+	carbon source
30970	17057 ChEBI	cellobiose	+	carbon source
30970	16947 ChEBI	citrate	+	carbon source
30970	23652 ChEBI	dextrin	+	carbon source
30970	28757 ChEBI	fructose	+	carbon source
30970	24148 ChEBI	galactonate	+	carbon source
30970	24175 ChEBI	galacturonate	+	carbon source
30970	24265 ChEBI	gluconate	+	carbon source
30970	17234 ChEBI	glucose	+	carbon source
30970	32323 ChEBI	glucuronamide	+	carbon source
30970	29987 ChEBI	glutamate	+	carbon source
30970	15428 ChEBI	glycine	+	carbon source
30970	28087 ChEBI	glycogen	+	carbon source
30970	21217 ChEBI	L-alaninamide	+	carbon source
30970	24996 ChEBI	lactate	+	carbon source
30970	17716 ChEBI	lactose	+	carbon source
30970	25017 ChEBI	leucine	+	carbon source
30970	15792 ChEBI	malonate	+	carbon source
30970	17306 ChEBI	maltose	+	carbon source
30970	37684 ChEBI	mannose	+	carbon source
30970	28053 ChEBI	melibiose	+	carbon source
30970	506227 ChEBI	N-acetylglucosamine	+	carbon source
30970	26271 ChEBI	proline	+	carbon source
30970	17272 ChEBI	propionate	+	carbon source
30970	16634 ChEBI	raffinose	+	carbon source
30970	26546 ChEBI	rhamnose	+	carbon source
30970	17822 ChEBI	serine	+	carbon source
30970	30031 ChEBI	succinate	+	carbon source
30970	17992 ChEBI	sucrose	+	carbon source
30970	27082 ChEBI	trehalose	+	carbon source
30970	16704 ChEBI	uridine	+	carbon source
30970	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30970	acid phosphatase	+	3.1.3.2
30970	alkaline phosphatase	+	3.1.3.1
30970	catalase	+	1.11.1.6
30970	cytochrome oxidase	+	1.9.3.1
30970	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Tidal flat

Isolation

@ref	Sample type
30970	tidal flat
67770	Surface tidal flat sediment of the Boseong-gun in South Korea

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3954149v1 assembly for Christiangramia aestuarii JCM 17790	scaffold	GCA_039541495			1028746	65.92
66792	ASM973558v1 assembly for Christiangramia aestuarii BS12	contig	GCA_009735585	1028746.3	2891820663	1028746	36.33

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30970	Gramella aestuarii strain BS12 16S ribosomal RNA gene, partial sequence	JF751047	1492		1028746

GC content

30970

GC-content (mol%)42.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3954149v1 assembly for Christiangramia aestuarii JCM 17790
NCBI: GCA_039541495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	81.16	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	80.19	no
125439	motility	BacteriaNetⓘ	no	70.74	no
125439	spore_formation	BacteriaNetⓘ	no	90.52	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Gramella bathymodioli sp. nov., isolated from a mussel inhabiting a hydrothermal field in the Okinawa Trough.	Liu L, Wang S, Zhou S, Sun W, Fu T, Zhang Y, Zhang XH, Yu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.004488	2020
Phylogeny	Gramella aestuarii sp. nov., isolated from a tidal flat, and emended description of Gramella echinicola.	Jeong SH, Jin HM, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijs.0.048694-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27300	IJSEM 2872 2013 ( DOI 10.1099/ijs.0.048694-0 , PubMed 23315405 )
#30970	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27300
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Christiangramia aestuarii (KACC 16188, JCM 17790, BS12)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039541495

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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