Name: Aureimonas rubiginis CC-CFT034
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133941

Type strain:

Species: Aureimonas rubiginis

Strain Designation: CC-CFT034

Culture col. no.: BCRC 80440, JCM 18445

Strain history: C.-C. Young CC-CFT034.

NCBI tax ID(s): 1198455 (species)

Section

Aureimonas rubiginis CC-CFT034 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from rusty iron plate.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Aurantimonadaceae*
	Genus	*Aureimonas*
	Species	**Aureimonas rubiginis**
	Full Scientific Name (LPSN)	Aureimonas rubiginis Lin et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30916]	Gram stain	negative

[Ref.: #30916]	Cell length	2.3 µm

[Ref.: #30916]	Cell width	1.3 µm

[Ref.: #30916]	Cell shape	rod-shaped

[Ref.: #30916]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #30916]			growth	20-30 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #30916]			growth	5.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30916]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30916]		NaCl		growth	0-2	%

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30916]	alanine ChEBI	+	carbon source
[Ref.: #30916]	arabinose ChEBI	+	carbon source
[Ref.: #30916]	fructose ChEBI	+	carbon source
[Ref.: #30916]	fucose ChEBI	+	carbon source
[Ref.: #30916]	galactose ChEBI	+	carbon source
[Ref.: #30916]	galacturonate ChEBI	+	carbon source
[Ref.: #30916]	glucose ChEBI	+	carbon source
[Ref.: #30916]	glycerol ChEBI	+	carbon source
[Ref.: #30916]	L-arabitol ChEBI	+	carbon source
[Ref.: #30916]	maltose ChEBI	+	carbon source
[Ref.: #30916]	mannitol ChEBI	+	carbon source
[Ref.: #30916]	proline ChEBI	+	carbon source
[Ref.: #30916]	rhamnose ChEBI	+	carbon source
[Ref.: #30916]	sorbitol ChEBI	+	carbon source
[Ref.: #30916]	sucrose ChEBI	+	carbon source
[Ref.: #30916]	trehalose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #30916]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30916]	catalase	+	1.11.1.6
[Ref.: #30916]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30916]	Sample type/isolated from	rusty iron plate

[Ref.: #67770]	Sample type/isolated from	Rusty iron plate
* marker position based on {}

Isolation sources categories

#Engineered

#Industrial

#Engineered product

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30916]	Aureimonas rubiginis strain CC-CFT034 16S ribosomal RNA gene, partial sequence	JQ864241	1473	GenBank	1198455 tax ID

[Ref.: #30916]	GC-content	67.7 mol%
[Ref.: #67770]	GC-content	67.7 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #30916]

Culture collection no.

BCRC 80440, JCM 18445

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aureimonas leprariae sp. nov., Isolated from a Lepraria sp. Lichen.	Zhang K, Jiang LQ, Wang LS, An DF, Lang L, Li GD, Wang XY, Shi SB, Li QY, Jiang CL, Jiang Y	Curr Microbiol	10.1007/s00284-019-01826-1	2019	*
Phylogeny	Aureimonas ferruginea sp. nov. and Aureimonas rubiginis sp. nov., two siderophore-producing bacteria isolated from rusty iron plates.	Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Shen FT, Young LS, Tsai CF, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.047431-0	2012	*
Phylogeny	Aureimonas psammosilene sp. nov., isolated from the roots of Psammosilene tunicoides.	Huang MJ, Huang WL, Narsing Rao MP, Xiao M, Huang HQ, Li WJ	Arch Microbiol	10.1007/s00203-020-01872-5	2020	*
Phylogeny	Aureimonas endophytica sp. nov., a novel endophytic bacterium isolated from Aegiceras corniculatum.	Li FN, Tuo L, Pan Z, Guo M, Lee SM, Chen L, Hu L, Sun CH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002046	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30916

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27246 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#27246

IJSEM 2430 2013 ( DOI 10.1099/ijs.0.047431-0 , PubMed 23203620 )

* These data were automatically processed and therefore are not curated

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