Name: Ferrimonas pelagia CBA4601
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133937

Type strain:

Species: Ferrimonas pelagia

Strain Designation: CBA4601

Culture col. no.: KACC 16695, KCTC 32029, JCM 18401

Strain history: S. W. Roh CBA4601.

NCBI tax ID(s): 1177826 (species)

Section

Ferrimonas pelagia CBA4601 is an anaerobe, Gram-negative, motile bacterium that was isolated from seawater.

Gram-negative
motile
rod-shaped
anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Ferrimonadaceae*
	Genus	*Ferrimonas*
	Species	**Ferrimonas pelagia**
	Full Scientific Name (LPSN)	Ferrimonas pelagia Yim et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30913]	Gram stain	negative

[Ref.: #30913]	Cell length	1.5 µm

[Ref.: #30913]	Cell width	0.9 µm

[Ref.: #30913]	Cell shape	rod-shaped

[Ref.: #30913]	Motility	yes

[Ref.: #30913]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30913]	growth	20-35 °C
[Ref.: #30913]	optimum	25 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #30913]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30913]			optimum	8
[Ref.: #30913]			growth	7.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30913]

Oxygen tolerance

anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30913]		NaCl		growth	0-4	%
[Ref.: #30913]		NaCl		optimum	2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30913]	adipate ChEBI	+	carbon source
[Ref.: #30913]	arabinose ChEBI	+	carbon source
[Ref.: #30913]	decanoate ChEBI	+	carbon source
[Ref.: #30913]	esculin ChEBI	+	hydrolysis
[Ref.: #30913]	gluconate ChEBI	+	carbon source
[Ref.: #30913]	maltose ChEBI	+	carbon source
[Ref.: #30913]	mannitol ChEBI	+	carbon source
[Ref.: #30913]	mannose ChEBI	+	carbon source
[Ref.: #30913]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #30913]	phenylacetate ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30913]	acid phosphatase	+	3.1.3.2
[Ref.: #30913]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30913]	catalase	+	1.11.1.6
[Ref.: #30913]	gelatinase	+
[Ref.: #30913]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30913]	Sample type/isolated from	seawater

[Ref.: #67770]	Sample type/isolated from	Marine water off the coast of Jeju Island
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ780822 (>99% sequence identity) for Ferrimonas pelagia subclade from Microbeatlas

Aquatic Samples	197
Soil Samples
Animal Samples
Plant Samples
Total Samples	197

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30913]	Ferrimonas pelagia strain CBA4601 16S ribosomal RNA gene, partial sequence	JQ780822	1459	GenBank	1177826 tax ID

[Ref.: #30913]

GC-content

54.2 mol%

Availability in culture collections External links

[Ref.: #30913]

Culture collection no.

KACC 16695, KCTC 32029, JCM 18401

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ferrimonas lipolytica sp. nov., a facultatively anaerobic bacterium isolated from seawater.	Bae SS, Jung YH, Kwon YM, Chung D, Baek K	Int J Syst Evol Microbiol	10.1099/ijsem.0.004665	2021	*
Phylogeny	Ferrimonas pelagia sp. nov., isolated from seawater.	Yim KJ, Lee M, Lee HW, Kim KN, Yang HM, Kim MJ, Hyun DW, Bae JW, Nam YD, Yoon C, Kim MS, Roh SW, Kim D	Int J Syst Evol Microbiol	10.1099/ijs.0.047332-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30913

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27243 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#27243

IJSEM 3175 2013 ( DOI 10.1099/ijs.0.047332-0 , PubMed 23435251 )

* These data were automatically processed and therefore are not curated

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