Sphingobacterium caeni (CCTCC AB 2012020, KACC 16850, DC-8)

Name: Sphingobacterium caeni (CCTCC AB 2012020, KACC 16850, DC-8)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133928

Type strain

Strain Designation DC-8

Culture col. no. CCTCC AB 2012020 KACC 16850 DC-8

NCBI tax ID(s) 1204554

Special Collections Literature strains

Sphingobacterium caeni DC-8 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from activated sludge.

Gram-negative rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

CCTCC AB 2012020 KACC 16850 DC-8

@ref 20215

Last LPSN update 2026-02-09 11:32:04

Domain Bacteria

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Sphingobacterium

Species Sphingobacterium caeni

Full scientific name Sphingobacterium caeni Sun et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30897	negative	1 µm	0.35 µm	rod-shaped

Pigmentation

30897

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30897	positive	growth	10-40
30897	positive	optimum	32.5

Culture pH

@ref	Ability	Type	PH	PH range
30897	positive	optimum	7.25
30897	positive	growth	5.0-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

30897

Oxygen toleranceaerobe

Spore formation

30897

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30897	NaCl	positive	growth	0-5 %
30897	NaCl	positive	optimum	0.5 %

Observation

30897

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30897	22599 ChEBI	arabinose	+	carbon source
30897	17234 ChEBI	glucose	+	carbon source
30897	17306 ChEBI	maltose	+	carbon source
30897	37684 ChEBI	mannose	+	carbon source
30897	28053 ChEBI	melibiose	+	carbon source
30897	506227 ChEBI	N-acetylglucosamine	+	carbon source
30897	17992 ChEBI	sucrose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30897	catalase	+	1.11.1.6
30897	cytochrome oxidase	+	1.9.3.1
30897	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Waste	#Activated sludge

Isolation

30897

Sample typeactivated sludge

Taxonmaps

69479

Global distribution of 16S sequence JX046042 (>99% sequence identity) for Sphingobacterium from Microbeatlas

Aquatic Samples	288
Soil Samples	208
Animal Samples	1040
Plant Samples	110
Total Samples	1646

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30897	Sphingobacterium caeni strain DC-8 16S ribosomal RNA gene, partial sequence	JX046042	1451		1204554

GC content

30897

GC-content (mol%)39.8

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphingobacterium caeni sp. nov., isolated from activated sludge.	Sun LN, Zhang J, Chen Q, He J, Li SP	Int J Syst Evol Microbiol	10.1099/ijs.0.046987-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27227	IJSEM 2260 2013 ( DOI 10.1099/ijs.0.046987-0 , PubMed 23148100 )
#30897	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27227
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

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Sphingobacterium caeni (CCTCC AB 2012020, KACC 16850, DC-8)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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