Komagataeibacter medellinensis | Type strain | NBRC 3288, Kondo 51, LMG 1693

Strain identifier

BacDive ID: 133875

Type strain:

Species: Komagataeibacter medellinensis

Culture col. no.: NBRC 3288, Kondo 51, LMG 1693

Section

Name and taxonomic classification
Morphology
Physiology and metabolism
Isolation, sampling and environmental information
Sequence information

External links

Komagataeibacter medellinensis NBRC 3288 is a gram-negative, rod-shaped bacterium that was isolated from food product.

gram-negative
rod-shaped
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Alphaproteobacteria
	Order	Rhodospirillales
	Family	Acetobacteraceae
	Genus	Komagataeibacter
	Species	Komagataeibacter medellinensis
	Full Scientific Name (PNU)	Komagataeibacter medellinensis (Castro et al. 2013) Yamada 2014

Synonym

Gluconacetobacter medellinensis

Information on morphological and physiological propertiesMorphology

[Ref.: #30737]	Gram stain	negative
[Ref.: #30737]	Cell length	2 µm
[Ref.: #30737]	Cell width	0.65 µm
[Ref.: #30737]	Cell shape	rod-shaped
[Ref.: #30737]	Motility	no

[Ref.: #30737]

Pigment production

yes

Information on physiology and metabolismPhysiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30737]	ethanol ChEBI	+	carbon source
[Ref.: #30737]	fructose ChEBI	+	carbon source
[Ref.: #30737]	gluconate ChEBI	+	carbon source
[Ref.: #30737]	maltose ChEBI	+	carbon source
[Ref.: #30737]	mannitol ChEBI	+	carbon source
[Ref.: #30737]	ribose ChEBI	+	carbon source
[Ref.: #30737]	sorbitol ChEBI	+	carbon source
[Ref.: #30737]	sucrose ChEBI	+	carbon source
[Ref.: #30737]	xylose ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30737]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #30737]

Sample type/isolated from

food product

Isolation sources categories

#Engineered

#Food production

#Food

What are isolation sources categories?

* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30737]	Gluconacetobacter medellensis strain LMG 1693 16S ribosomal RNA gene, partial sequence	JX013852	1443	GenBank	634177 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	GCA_000182745	complete	GenBank	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis ID13488	GCA_009268135	contig	GenBank	1177712 tax ID	*
[Ref.: #66792]	Gluconacetobacter xylinus NBRC 3288	634177.7	complete	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.18	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.15	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.14	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.16	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.17	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.12	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis NBRC 3288	634177.13	plasmid	PATRIC	634177 tax ID	*
[Ref.: #66792]	Komagataeibacter medellinensis strain ID13488	1177712.4	wgs	PATRIC	1177712 tax ID	*

[Ref.: #30737]

GC-content

60.7 mol%

Availability in culture collectionsExternal links

[Ref.: #30737]

Culture collection no.

NBRC 3288, Kondo 51, LMG 1693

[Ref.: #20218]

Associated Passport(s) in StrainInfo

887554, 65

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30737

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 ) - originally annotated from #27068 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#27068

IJSEM 1119 2013 ( DOI 10.1099/ijs.0.043414-0 )

* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Komagataeibacter medellinensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF