Name: Mariniflexile jejuense SSK2-3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133866

Type strain:

Species: Mariniflexile jejuense

Strain Designation: SSK2-3

Culture col. no.: KCTC 23958, CCUG 62414

NCBI tax ID(s): 1173582 (species)

SI-ID 408398

CCUG 62414

Section

Mariniflexile jejuense SSK2-3 is an aerobe, Gram-negative, motile bacterium that was isolated from freshwater .

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Mariniflexile*
	Species	**Mariniflexile jejuense**
	Full Scientific Name (LPSN)	Mariniflexile jejuense Jung and Yoon 2013

Information on morphological and physiological properties Morphology

[Ref.: #30712]	Gram stain	negative

[Ref.: #30712]	Cell length	6 µm

[Ref.: #30712]	Cell width	0.35 µm

[Ref.: #30712]	Cell shape	rod-shaped

[Ref.: #30712]	Motility	yes

[Ref.: #30712]	Flagellum arrangement	gliding

[Ref.: #62830]

Incubation period

3 days

[Ref.: #30712]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30712]	growth	04-37 °C
[Ref.: #30712]	optimum	27.5 °C
[Ref.: #62830]	growth	30 °C

[Ref.: #30712]	Temperature range	mesophilic
[Ref.: #62830]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30712]			optimum	7.25
[Ref.: #30712]			growth	5.5-7.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30712]	Oxygen tolerance	aerobe
[Ref.: #62830]	Oxygen tolerance	aerobe

[Ref.: #30712]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30712]		NaCl		growth	0-6	%
[Ref.: #30712]		NaCl		optimum	2	%

[Ref.: #30712]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30712]	arabinose ChEBI	+	carbon source
[Ref.: #30712]	esculin ChEBI	+	hydrolysis
[Ref.: #30712]	fructose ChEBI	+	carbon source
[Ref.: #30712]	glucose ChEBI	+	carbon source
[Ref.: #30712]	maltose ChEBI	+	carbon source
[Ref.: #30712]	mannose ChEBI	+	carbon source
[Ref.: #30712]	succinate ChEBI	+	carbon source
[Ref.: #30712]	sucrose ChEBI	+	carbon source
[Ref.: #30712]	xylose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30712]	acid phosphatase	+	3.1.3.2
[Ref.: #30712]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30712]	catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30712]	Sample type/isolated from	freshwater (river, lake, pond)

[Ref.: #62830]	Sample type/isolated from	Junction of seawater and freshwater
[Ref.: #62830]	Geographic location (country and/or sea, region)	Geoje Island
[Ref.: #62830]	Country	Republic of Korea
[Ref.: #62830]	Country ISO 3 Code	KOR
[Ref.: #62830]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ739457 (>99% sequence identity) for Mariniflexile jejuense from Microbeatlas

Aquatic Samples	264
Soil Samples	5
Animal Samples	5
Plant Samples	4
Total Samples	278

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30712]	Mariniflexile jejuense strain SSK2-3 16S ribosomal RNA gene, partial sequence	JQ739457	1436	GenBank	1173582 tax ID

[Ref.: #30712]

GC-content

32.4 mol%

Availability in culture collections External links

[Ref.: #30712]

Culture collection no.

KCTC 23958, CCUG 62414

[Ref.: #91620]

SI-ID 408398

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mariniflexile jejuense sp. nov., isolated from the junction between seawater and a freshwater spring, and emended description of the genus Mariniflexile.	Jung YT, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.042796-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30712

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27043 (see below)

#62830 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 62414

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91620

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408398.1 )

#27043

IJSEM 1329 2013 ( DOI 10.1099/ijs.0.042796-0 , PubMed 22798650 )

* These data were automatically processed and therefore are not curated

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