Marinomonas hwangdonensis (KCTC 23661, CCUG 61321, HDW-15)

Name: Marinomonas hwangdonensis (KCTC 23661, CCUG 61321, HDW-15)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133771

Type strain

Strain Designation HDW-15

Culture col. no. KCTC 23661 CCUG 61321 HDW-15

NCBI tax ID(s) 1053647

Special Collections CCUG KCTC Literature strains

Links

Marinomonas hwangdonensis HDW-15 is an aerobe, Gram-negative, motile prokaryote that was isolated from seawater.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 408807

KCTC 23661,CCUG 61321

@ref 20215

Last LPSN update 2025-12-16 10:01:52

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Oceanospirillaceae

Genus Marinomonas

Species Marinomonas hwangdonensis

Full scientific name Marinomonas hwangdonensis Jung et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30460	negative	2 µm	0.35 µm	rod-shaped
67771	negative
125439	negative				97

Colony morphology

62614

Incubation period2 days

Pigmentation

30460

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
30460	positive	growth	04-37
30460	positive	optimum	25	mesophilic
62614	positive	growth	30	mesophilic
67771	positive	growth	25	mesophilic

Culture pH

@ref	Ability	Type	PH
30460	positive	optimum	7.5
30460	positive	growth	5.5-8

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30460	aerobe
62614	aerobe
67771	aerobe

Spore formation

@ref	Spore formation	Confidence
30460
125439		99.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30460	NaCl	positive	growth	0-13 %
30460	NaCl	positive	optimum	2 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30460	17057 ChEBI	cellobiose	+	carbon source
30460	28260 ChEBI	galactose	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
30460	seawater
62614	Sea water	2007	Hwang-do,Yellow Sea	Republic of Korea	KOR	Asia
67771	From seawater		Yellow Sea	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence JN087530 (>99% sequence identity) for Marinomonas from Microbeatlas

Aquatic Samples	273
Soil Samples	11
Animal Samples	10
Plant Samples	3
Total Samples	297

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM372124v1 assembly for Marinomonas hwangdonensis HDW-15	contig	GCA_003721245	1053647.3	2834262506	1053647	68.82

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30460	Marinomonas hwangdonensis strain HDW-15 16S ribosomal RNA gene, partial sequence	JN087530	1504		1053647

GC content

30460

GC-content (mol%)48.7

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Marinomonas hwangdonensis HDW-15
NCBI: GCA_003721245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.70	no
125439	motility	BacteriaNetⓘ	yes	52.30	no
125439	gram_stain	BacteriaNetⓘ	negative	97.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	79.80	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinomonas lutimaris sp. nov., isolated from a tidal flat sediment of the East China Sea.	Gao Y, Wei Y, Wang P	Int J Syst Evol Microbiol	10.1099/ijsem.0.005368	2022
Phylogeny	Marinomonas hwangdonensis sp. nov., isolated from seawater.	Jung YT, Oh TK, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.036582-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#30460	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26795 (see below)
#62614	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 61321
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Marinomonas hwangdonensis (KCTC 23661, CCUG 61321, HDW-15)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003721245

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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