Flavivirga jejuensis (KACC 14158, JCM 17113, JC2682)

Name: Flavivirga jejuensis (KACC 14158, JCM 17113, JC2682)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133735

Type strain

Strain Designation JC2682

Culture col. no. KACC 14158 JCM 17113 JC2682

NCBI tax ID(s) 870487

Special Collections JCM Literature strains

History J. Chun JC2682.

Links

Flavivirga jejuensis JC2682 is an aerobe, Gram-negative, motile bacterium that was isolated from seawater.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 133387

JCM 17113

@ref 20215

Last LPSN update 2026-02-09 11:32:01

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavivirga

Species Flavivirga jejuensis

Full scientific name Flavivirga jejuensis Yi et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
30330	negative	5.3 µm	0.35 µm	rod-shaped		gliding

Pigmentation

30330

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30330	positive	growth	4-30
30330	positive	optimum	25
67770	positive	growth	25

Physiology and metabolism

Oxygen tolerance

30330

Oxygen toleranceaerobe

Spore formation

30330

Spore formationno

Observation

67770

Observationquinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30330	22599 ChEBI	arabinose	+	carbon source
30330	17057 ChEBI	cellobiose	+	carbon source
30330	4853 ChEBI	esculin	+	hydrolysis
30330	28757 ChEBI	fructose	+	carbon source
30330	33984 ChEBI	fucose	+	carbon source
30330	28260 ChEBI	galactose	+	carbon source
30330	17234 ChEBI	glucose	+	carbon source
30330	17716 ChEBI	lactose	+	carbon source
30330	29864 ChEBI	mannitol	+	carbon source
30330	37684 ChEBI	mannose	+	carbon source
30330	17632 ChEBI	nitrate	+	reduction
30330	16634 ChEBI	raffinose	+	carbon source
30330	27082 ChEBI	trehalose	+	carbon source
30330	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30330	acid phosphatase	+	3.1.3.2
30330	alkaline phosphatase	+	3.1.3.1
30330	catalase	+	1.11.1.6
30330	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
30330	seawater
67770	Seawater of Jeju Island	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence HM475139 (>99% sequence identity) for Flavivirga jejuensis subclade from Microbeatlas

Aquatic Samples	85
Soil Samples	1
Animal Samples	1
Plant Samples
Total Samples	87

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3054076v1 assembly for Flavivirga jejuensis KACC 14158	scaffold	GCA_030540765	870487.5	8055229159	870487	71.54
124043	ASM3953938v1 assembly for Flavivirga jejuensis JCM 17113	scaffold	GCA_039539385			870487	54.46

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30330	Flavivirga jejuensis strain JC2682 from South Korea 16S ribosomal RNA gene, partial sequence	HM475139	1439		870487

GC content

@ref	GC-content (mol%)	Method
30330	27
67770	27	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavivirga rizhaonensis sp. nov., a marine bacterium isolated from intertidal sand.	Liu A, Liu HM, Du F, Wang S, Zhao LY, Zhang HH, Li YQ, Xue QJ, Li XZ	Antonie Van Leeuwenhoek	10.1007/s10482-019-01291-7	2019
Phylogeny	Flavivirga jejuensis gen. nov., sp. nov., and Flavivirga amylovorans sp. nov., new members of the family Flavobacteriaceae isolated from seawater, and emended descriptions of the genera Psychroserpens and Lacinutrix.	Yi H, Cho JC, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.033605-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26671	IJSEM 1061 2012 ( DOI 10.1099/ijs.0.033605-0 , PubMed 21705445 )
#30330	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26671
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Flavivirga jejuensis (KACC 14158, JCM 17113, JC2682)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_030540765

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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