Name: Nocardia pigrifrangens 7031
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133695

Type strain:

Species: Nocardia pigrifrangens

Strain Designation: 7031

Culture col. no.: AS 4.1808, JCM 11884

NCBI tax ID(s): 113618 (species)

SI-ID 134300

AS 4.1808, JCM 11884, CIP 108549, DSM 44957, CGMCC 4.1808

Special Collections

Section

When using BacDive for research please cite our paper

Nocardia pigrifrangens 7031 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from contaminated agar plate.

Gram-positive
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia pigrifrangens**
	Full Scientific Name (LPSN)	Nocardia pigrifrangens Wang et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30181]	Gram stain	positive

[Ref.: #30181]	Cell shape	rod-shaped

[Ref.: #30181]	Motility	no

[Ref.: #30181]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #30181]			growth	18-35 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30181]

Oxygen tolerance

aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30181]	3-hydroxybenzoate ChEBI	+	carbon source
[Ref.: #30181]	acetate ChEBI	+	carbon source
[Ref.: #30181]	arabinose ChEBI	+	carbon source
[Ref.: #30181]	cellobiose ChEBI	+	carbon source
[Ref.: #30181]	ethanol ChEBI	+	carbon source
[Ref.: #30181]	fructose ChEBI	+	carbon source
[Ref.: #30181]	gluconate ChEBI	+	carbon source
[Ref.: #30181]	glucose ChEBI	+	carbon source
[Ref.: #30181]	glycerol ChEBI	+	carbon source
[Ref.: #30181]	glycogen ChEBI	+	carbon source
[Ref.: #30181]	mannose ChEBI	+	carbon source
[Ref.: #30181]	nitrate ChEBI	+	reduction
[Ref.: #30181]	pyruvate ChEBI	+	carbon source
[Ref.: #30181]	ribose ChEBI	+	carbon source
[Ref.: #30181]	salicin ChEBI	+	carbon source
[Ref.: #30181]	succinate ChEBI	+	carbon source
[Ref.: #30181]	sucrose ChEBI	+	carbon source
[Ref.: #30181]	trehalose ChEBI	+	carbon source
[Ref.: #30181]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30181]		catalase	+	1.11.1.6
[Ref.: #30181]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30181]	Sample type/isolated from	contaminated agar plate
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Engineered	#Laboratory	#Lab enrichment

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30181]	Nocardia pigrifrangens strain 7031 16S ribosomal RNA gene, partial sequence	AF219974	1424	GenBank ENA	113618 tax ID

[Ref.: #30181]

GC-content

68.7 mol%

Availability in culture collections External links

[Ref.: #30181]

Culture collection no.

AS 4.1808, JCM 11884

[Ref.: #91561]

SI-ID 134300

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia pigrifrangens sp. nov., a novel actinomycete isolated from a contaminated agar plate.	Wang L, Zhang Y, Huang Y, Maldonado LA, Liu Z, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.03035-0	2004	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30181

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26529 (see below)

#91561

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID134300.1 )

#26529

IJSEM 1683 2004 ( DOI 10.1099/ijs.0.03035-0 , PubMed 15388728 )

* These data were automatically processed and therefore are not curated

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