Name: Jannaschia cystaugens CFPB-A9T
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133693

Type strain:

Species: Jannaschia cystaugens

Strain Designation: CFPB-A9T

Culture col. no.: LMG 22015, NBRC 100362

NCBI tax ID(s): 266809 (species)

SI-ID 126108

LMG 22015, NBRC 100362

Other strains from Jannaschia cystaugens

J. cystaugens 5SM22, DSM 16310, CECT 5294, DSM ...

Section

Jannaschia cystaugens CFPB-A9T is an aerobe, Gram-negative, motile bacterium that was isolated from seawater.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Jannaschia*
	Species	**Jannaschia cystaugens**
	Full Scientific Name (LPSN)	Jannaschia cystaugens Adachi et al. 2004

Synonym

Thalassobacter stenotrophicus

Information on morphological and physiological properties Morphology

[Ref.: #30175]	Gram stain	negative

[Ref.: #30175]	Cell length	1.75 µm

[Ref.: #30175]	Cell width	0.65 µm

[Ref.: #30175]	Cell shape	rod-shaped

[Ref.: #30175]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #30175]			growth	05-30 °C
[Ref.: #30175]			optimum	27.5 °C

[Ref.: #30175]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #30175]			optimum	7
[Ref.: #30175]			growth	07-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30175]

Oxygen tolerance

aerobe

[Ref.: #30175]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30175]		NaCl		growth	02-07	%
[Ref.: #30175]		NaCl		optimum	4.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30175]	gluconate ChEBI	+	carbon source
[Ref.: #30175]	glucose ChEBI	+	carbon source
[Ref.: #30175]	glycerol ChEBI	+	carbon source
[Ref.: #30175]	L-arabitol ChEBI	+	carbon source
[Ref.: #30175]	mannitol ChEBI	+	carbon source
[Ref.: #30175]	sorbitol ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30175]		catalase	+	1.11.1.6
[Ref.: #30175]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30175]	Sample type/isolated from	seawater
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB121782 (>99% sequence identity) for Thalassobacter stenotrophicus subclade from Microbeatlas

Aquatic Samples	1595
Soil Samples	50
Animal Samples	73
Plant Samples	6
Total Samples	1724

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30175]	Jannaschia cystaugens gene for 16S rRNA, partial sequence, strain:CFPB-A9	AB121782	1340	GenBank	266809 tax ID

[Ref.: #30175]

GC-content

59.1 mol%

Availability in culture collections External links

[Ref.: #30175]

Culture collection no.

LMG 22015, NBRC 100362

[Ref.: #91559]

SI-ID 126108

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Jannaschia cystaugens sp. nov., an Alexandrium (Dinophyceae) cyst formation-promoting bacterium from Hiroshima Bay, Japan.	Adachi M, Kanno T, Okamoto R, Shinozaki A, Fujikawa-Adachi K, Nishijima T	Int J Syst Evol Microbiol	10.1099/ijs.0.03029-0	2004	*
Phylogeny	Thalassobacter stenotrophicus Macian et al. 2005 is a later synonym of Jannaschia cystaugens Adachi et al. 2004, with emended description of the genus Thalassobacter.	Pujalte MJ, Macian MC, Arahal DR, Garay E	Int J Syst Evol Microbiol	10.1099/ijs.0.63617-0	2005	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30175

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26524 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91559

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID126108.1 )

#26524

IJSEM 1687 2004 ( DOI 10.1099/ijs.0.03029-0 , PubMed 15388729 )

* These data were automatically processed and therefore are not curated

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