Name: Algoriphagus jejuensis KCTC 22647
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133687

Type strain:

Species: Algoriphagus jejuensis

Culture col. no.: KCTC 22647, JCM 16112, CNU 040

Strain history: <- DH Lee, Sunchon Natl. Univ.

NCBI tax ID(s): 419934 (species)

Special Collections

Section

Algoriphagus jejuensis KCTC 22647 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Algoriphagus*
	Species	**Algoriphagus jejuensis**
	Full Scientific Name (LPSN)	Algoriphagus jejuensis Lee et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30159]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #30159]	Cell length	0.5-3.0 µm

[Ref.: #30159]	Cell width	0.3-0.5 µm

[Ref.: #30159]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #30159]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #30159]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #30159]	growth	4-30 °C
[Ref.: #30159]	optimum	25 °C
[Ref.: #67770]	growth	30 °C
[Ref.: #67771]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #30159]			growth	5.5-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30159]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30159]		NaCl		growth	0-5	%

[Ref.: #67770]	Observation	quinones: MK-7
[Ref.: #67771]	Observation	quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30159]	esculin ChEBI	+	hydrolysis
[Ref.: #30159]	malate ChEBI	+	carbon source
[Ref.: #30159]	tween 20 ChEBI	+	carbon source
[Ref.: #30159]	tween 40 ChEBI	+	carbon source
[Ref.: #30159]	tween 60 ChEBI	+	carbon source
[Ref.: #30159]	tween 80 ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #30159]	acid phosphatase	+	3.1.3.2
[Ref.: #30159]	alkaline phosphatase	+	3.1.3.1
[Ref.: #30159]	catalase	+	1.11.1.6
[Ref.: #30159]	cytochrome oxidase	+	1.9.3.1
[Ref.: #30159]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #30159]	Sample type/isolated from	seawater

[Ref.: #67770]	Sample type/isolated from	Coastal seawater of Jeju Island
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From coastal seawater
[Ref.: #67771]	Geographic location (country and/or sea, region)	Jeju
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #30159]	Algoriphagus jejuensis strain CNU040 16S ribosomal RNA gene, partial sequence	EF217418	1519	GenBank ENA	419934 tax ID
[Ref.: #67770]	Erythrobacter sp. CNU108 16S ribosomal RNA gene, partial sequence	EF217416	1391	GenBank ENA	419935 tax ID

[Ref.: #30159]	GC-content	48.5 mol%
[Ref.: #67770]	GC-content	48.5 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #30159]

Culture collection no.

KCTC 22647, JCM 16112, CNU 040

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriphagus jejuensis sp. nov., isolated from seawater.	Lee DH, Kahng HY, Lee SB	Int J Syst Evol Microbiol	10.1099/ijs.0.030106-0	2011	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30159

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26510 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#26510

IJSEM 409 2012 ( DOI 10.1099/ijs.0.030106-0 , PubMed 21460141 )

* These data were automatically processed and therefore are not curated

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