Algoriphagus jejuensis (KCTC 22647, JCM 16112, CNU 040)

Name: Algoriphagus jejuensis (KCTC 22647, JCM 16112, CNU 040)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133687

Type strain

Culture col. no. KCTC 22647 JCM 16112 CNU 040

NCBI tax ID(s) 419934

Special Collections JCM KCTC Literature strains

History JCM <-- D.-H. Lee CNU040. KCTC <- DH Lee, Sunchon Natl. Univ.

Links

Algoriphagus jejuensis KCTC 22647 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from seawater.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 287985

KCTC 22647,JCM 16112

@ref 20215

Last LPSN update 2026-05-29 08:38:09

Domain Bacteria

Phylum Bacteroidota

Class Cytophagia

Order Cytophagales

Family Cyclobacteriaceae

Genus Algoriphagus

Species Algoriphagus jejuensis

Full scientific name Algoriphagus jejuensis Lee et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
30159	negative	0.5-3.0 µm	0.3-0.5 µm	rod-shaped
67771				rod-shaped
67771	negative
125439	negative				96.861

Pigmentation

30159

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
30159	positive	growth	4-30
30159	positive	optimum	25
67770	positive	growth	30
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
30159	positive	growth	5.5-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
30159	aerobe
67771	aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.729

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30159	NaCl	positive	growth	0-5 %

Observation

@ref	Observation
67770	quinones: MK-7
67771	quinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30159	4853 ChEBI	esculin	+	hydrolysis
30159	25115 ChEBI	malate	+	carbon source
30159	53424 ChEBI	tween 20	+	carbon source
30159	53423 ChEBI	tween 40	+	carbon source
30159	53425 ChEBI	tween 60	+	carbon source
30159	53426 ChEBI	tween 80	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30159	acid phosphatase	+	3.1.3.2
30159	alkaline phosphatase	+	3.1.3.1
30159	catalase	+	1.11.1.6
30159	cytochrome oxidase	+	1.9.3.1
30159	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
30159	seawater
67770	Coastal seawater of Jeju Island		Republic of Korea	KOR	Asia
67771	From coastal seawater	Jeju	Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3952345v1 assembly for Algoriphagus jejuensis JCM 16112	contig	GCA_039523455	419934	66.18

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30159	Algoriphagus jejuensis strain CNU040 16S ribosomal RNA gene, partial sequence	EF217418	1519		419934
67770	Erythrobacter sp. CNU108 16S ribosomal RNA gene, partial sequence	EF217416	1391		419935

GC content

@ref	GC-content (mol%)	Method
30159	48.5
67770	48.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3952345v1 assembly for Algoriphagus jejuensis JCM 16112
NCBI: GCA_039523455

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	85.44	no
125439	gram_stain	BacteriaNetⓘ	negative	96.86	no
125439	spore_formation	BacteriaNetⓘ	no	99.73	no
125439	motility	BacteriaNetⓘ	no	74.95	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriphagus jejuensis sp. nov., isolated from seawater.	Lee DH, Kahng HY, Lee SB	Int J Syst Evol Microbiol	10.1099/ijs.0.030106-0	2011

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26510	IJSEM 409 2012 ( DOI 10.1099/ijs.0.030106-0 , PubMed 21460141 )
#30159	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26510
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Algoriphagus jejuensis (KCTC 22647, JCM 16112, CNU 040)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039523455

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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