When using BacDive for research please cite our paper
Agarivorans albus IAM 14998 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Omphalius pfeifferi pfeifferi Banda.
- Gram-negative
- motile
- rod-shaped
- aerobe
- mesophilic
- 16S sequence
- Bacteria
- genome sequence
-
Information on the name and the taxonomic classification.
Name and taxonomic classification
|
-
Information on morphological and physiological properties
Morphology
|
-
Information on culture and growth conditions
Culture and growth conditions
|
-
Information on physiology and metabolism
Physiology and metabolism
-
Information on isolation source, the sampling and environmental conditions
Isolation, sampling and environmental information
|
-
Information on possible application of the strain and its possible interaction with e.g. potential hosts
Safety information
|
-
Information on genomic background e.g. entries in nucleic sequence databass
Sequence information
|
-
Data predicted using genome information as a basis
Genome-based predictions
|
-
Availability in culture collections
External links
References
-
#20215 Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) -
#29979 Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26347 (see below) -
#32699 ; Curators of the CIP; -
#66792 Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . -
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM; -
#68382 Automatically annotated from API zym . -
#91546 Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID93908.1 ) -
#116196 Collection of Institut Pasteur ; Curators of the CIP; CIP 108457 -
#124043 Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . -
#125438 Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) -
#125439 Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . -
#26347 IJSEM 693 2004 ( DOI 10.1099/ijs.0.02778-0 , PubMed 15143010 ) - * These data were automatically processed and therefore are not curated
Change proposalYou found an error in BacDive? Please tell us about it! Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes. |