Name: Aliiglaciecola litoralis NRIC 0754
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133538

Type strain:

Species: Aliiglaciecola litoralis

Culture col. no.: NRIC 0754, JCM 15896, KMM 3894

Strain history: N. Tanaka <-- L. A. Romanenko Sd 2-38 (=KMM 3894).

NCBI tax ID(s): 582857 (species)

Other strains from Aliiglaciecola litoralis

A. litoralis

Section

Aliiglaciecola litoralis NRIC 0754 is an aerobe, Gram-negative, motile bacterium that was isolated from marine sediment.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Aliiglaciecola*
	Species	**Aliiglaciecola litoralis**
	Full Scientific Name (LPSN)	Aliiglaciecola litoralis (Tanaka et al. 2010) Jean et al. 2013

Synonym

Aestuariibacter litoralis

Information on morphological and physiological properties Morphology

[Ref.: #29404]	Gram stain	negative

[Ref.: #29404]	Cell length	2 µm

[Ref.: #29404]	Cell shape	rod-shaped

[Ref.: #29404]	Motility	yes

[Ref.: #29404]

Pigment production

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #29404]	growth	04-40 °C
[Ref.: #29404]	optimum	30 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #29404]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29404]			optimum	7.25
[Ref.: #29404]			growth	5.5-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29404]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29404]		NaCl		growth	0.5-6	%

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29404]		esculin ChEBI	+	hydrolysis
[Ref.: #29404]		nitrate ChEBI	+	reduction

	Enzyme	Enzyme activity	EC number
[Ref.: #29404]	catalase	+	1.11.1.6
[Ref.: #29404]	cytochrome oxidase	+	1.9.3.1
[Ref.: #29404]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29404]	Sample type/isolated from	marine sediment

[Ref.: #67770]	Sample type/isolated from	Marine sandy sample collected off shore of the Sea of Japan,at a depth of 3 m
[Ref.: #67770]	Country	Russia
[Ref.: #67770]	Country ISO 3 Code	RUS
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB473549 (>99% sequence identity) for Aliiglaciecola litoralis subclade from Microbeatlas

Aquatic Samples	116
Soil Samples
Animal Samples	2
Plant Samples	2
Total Samples	120

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29404]	Aestuariibacter litoralis gene for 16S ribosomal RNA, partial sequence, strain: Sd 2-38 (= KMM 3894)	AB473549	1504	GenBank	582857 tax ID

[Ref.: #29404]	GC-content	43 mol%
[Ref.: #67770]	GC-content	43 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #29404]

Culture collection no.

NRIC 0754, JCM 15896, KMM 3894

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aestuariibacter litoralis sp. nov., isolated from a sandy sediment of the Sea of Japan.	Tanaka N, Romanenko LA, Frolova GM, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/ijs.0.012435-0	2009	*
Phylogeny	Aliiglaciecola coringensis sp. nov., isolated from a water sample collected from mangrove forest in Coringa, Andhra Pradesh, India.	Gupta V, Sharma G, Srinivas TN, Anil Kumar P	Antonie Van Leeuwenhoek	10.1007/s10482-014-0279-0	2014	*
Phylogeny	Reclassification of [Glaciecola] lipolytica and [Aestuariibacter] litoralis in Aliiglaciecola gen. nov., as Aliiglaciecola lipolytica comb. nov. and Aliiglaciecola litoralis comb. nov., respectively.	Jean WD, Hsu CY, Huang SP, Chen JS, Lin S, Su MH, Shieh WY	Int J Syst Evol Microbiol	10.1099/ijs.0.045625-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29404

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25811 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#25811

IJSEM 317 2010 ( DOI 10.1099/ijs.0.012435-0 , PubMed 19651716 )

* These data were automatically processed and therefore are not curated

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