Name: Halomonas xinjiangensis CCTCC AB 208329
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133533

Type strain:

Species: Halomonas xinjiangensis

Culture col. no.: CCTCC AB 208329, KCTC 22608, TRM 0175

NCBI tax ID(s): 1166948 (species)

Section

Halomonas xinjiangensis CCTCC AB 208329 is an aerobe, Gram-negative, motile bacterium that was isolated from soil.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Species	**Halomonas xinjiangensis**
	Full Scientific Name (PNU)	Halomonas xinjiangensis Guan et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29363]	Gram stain	negative
[Ref.: #29363]	Cell length	1.6 µm
[Ref.: #29363]	Cell width	0.8 µm
[Ref.: #29363]	Cell shape	rod-shaped
[Ref.: #29363]	Motility	yes

[Ref.: #29363]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #29363]			growth	15-50 °C
[Ref.: #29363]			optimum	37 °C

[Ref.: #29363]

Temperature range

mesophilic

	pH	Kind of pH		pH	pH range
[Ref.: #29363]			optimum	7
[Ref.: #29363]			growth	06-09	alkaliphile

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29363]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29363]		NaCl		growth	0-20	%
[Ref.: #29363]		NaCl		optimum	11.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29363]	asparagine ChEBI	+	carbon source
[Ref.: #29363]	esculin ChEBI	+	hydrolysis
[Ref.: #29363]	fructose ChEBI	+	carbon source
[Ref.: #29363]	galactose ChEBI	+	carbon source
[Ref.: #29363]	mannose ChEBI	+	carbon source
[Ref.: #29363]	nitrate ChEBI	+	reduction
[Ref.: #29363]	rhamnose ChEBI	+	carbon source
[Ref.: #29363]	serine ChEBI	+	carbon source
[Ref.: #29363]	trehalose ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29363]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29363]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU822512 (>99% sequence identity) for Halomonas xinjiangensis subclade from Microbeatlas

Aquatic Samples	427
Soil Samples	73
Animal Samples	97
Plant Samples	20
Total Samples	617

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29363]	Halomonas xinjiangensis strain TRM 0175 16S ribosomal RNA gene, complete sequence	EU822512	1420	GenBank	1166948 tax ID

[Ref.: #29363]

GC-content

60 mol%

Availability in culture collections External links

[Ref.: #29363]

Culture collection no.

CCTCC AB 208329, KCTC 22608, TRM 0175

[Ref.: #20218]

Associated Passport(s) in StrainInfo

852625, 852626

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halomonas xinjiangensis sp. nov., a halotolerant bacterium isolated from a salt lake.	Guan TW, Xiao J, Zhao K, Luo XX, Zhang XP, Zhang LL	Int J Syst Evol Microbiol	10.1099/ijs.0.011593-0	2009	*
Phylogeny	Halomonas zincidurans sp. nov., a heavy-metal-tolerant bacterium isolated from the deep-sea environment.	Xu L, Xu XW, Meng FX, Huo YY, Oren A, Yang JY, Wang CS	Int J Syst Evol Microbiol	10.1099/ijs.0.051656-0	2013	*
Genetics	Investigation of mercury tolerance in Chromohalobacter israelensis DSM 6768T and Halomonas zincidurans B6T by comparative genomics with Halomonas xinjiangensis TRM 0175T.	Zhou P, Huo YY, Xu L, Wu YH, Meng FX, Wang CS, Xu XW	Mar Genomics	10.1016/j.margen.2014.11.008	2014	*
Phylogeny	Halomonas radicis sp. nov., isolated from Arthrocnemum macrostachyum growing in the Odiel marshes(Spain) and emended descriptions of Halomonas xinjiangensis and Halomonas zincidurans.	Navarro-Torre S, Carro L, Rodriguez-Llorente ID, Pajuelo E, Caviedes MA, Igual JM, Klenk HP, Montero-Calasanz MDC	Int J Syst Evol Microbiol	10.1099/ijsem.0.003742	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#29363

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25774 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#25774

IJSEM 349 2010 ( DOI 10.1099/ijs.0.011593-0 , PubMed 19651733 )

* These data were automatically processed and therefore are not curated

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