Name: Marinimicrobium locisalis ISL-43
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133497

Type strain:

Species: Marinimicrobium locisalis

Strain Designation: ISL-43

Culture col. no.: KCTC 22484, CCUG 56757, ISL -43

Strain history: <- JH Yoon, KRIBB

NCBI tax ID(s): 546022 (species)

SI-ID 410843

CCUG 56757

Section

Marinimicrobium locisalis ISL-43 is an aerobe, Gram-negative, motile bacterium that was isolated from hypersaline environment.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Cellvibrionales*
	Family	*Cellvibrionaceae*
	Genus	*Marinimicrobium*
	Species	**Marinimicrobium locisalis**
	Full Scientific Name (LPSN)	Marinimicrobium locisalis Yoon et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29200]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #29200]	Cell length	0.7-3.5 µm

[Ref.: #29200]	Cell width	0.2-0.4 µm

[Ref.: #29200]	Cell shape	rod-shaped

[Ref.: #29200]	Motility	yes

[Ref.: #61079]

Incubation period

5 days

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #29200]	growth	04-40 °C
[Ref.: #29200]	optimum	30 °C
[Ref.: #61079]	growth	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #29200]	Temperature range	mesophilic
[Ref.: #61079]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29200]			optimum	7.5
[Ref.: #29200]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #61079]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #29200]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29200]		NaCl		growth	01-18	%
[Ref.: #29200]		NaCl		optimum	2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29200]	arabinose ChEBI	+	carbon source
[Ref.: #29200]	cellobiose ChEBI	+	carbon source
[Ref.: #29200]	esculin ChEBI	+	hydrolysis
[Ref.: #29200]	galactose ChEBI	+	carbon source
[Ref.: #29200]	glucose ChEBI	+	carbon source
[Ref.: #29200]	maltose ChEBI	+	carbon source
[Ref.: #29200]	salicin ChEBI	+	carbon source
[Ref.: #29200]	xylose ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #29200]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29200]	catalase	+	1.11.1.6
[Ref.: #29200]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29200]	Sample type/isolated from	hypersaline environment

[Ref.: #61079]	Sample type/isolated from	Marine solar saltern sediment
[Ref.: #61079]	Sampling date	2006
[Ref.: #61079]	Geographic location (country and/or sea, region)	Yellow Sea
[Ref.: #61079]	Country	Republic of Korea
[Ref.: #61079]	Country ISO 3 Code	KOR
[Ref.: #61079]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From salten field
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Condition

#Saline

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU874388 (>99% sequence identity) for Marinimicrobium locisalis from Microbeatlas

Aquatic Samples	41
Soil Samples	9
Animal Samples
Plant Samples	1
Total Samples	51

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29200]	Marinimicrobium sp. ISL-43 16S ribosomal RNA gene, partial sequence	EU874388	1486	GenBank	546022 tax ID

[Ref.: #29200]

GC-content

58.4 mol%

Availability in culture collections External links

[Ref.: #29200]

Culture collection no.

KCTC 22484, CCUG 56757, ISL -43

[Ref.: #91471]

SI-ID 410843

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinimicrobium locisalis sp. nov., isolated from a marine solar saltern, and emended description of the genus Marinimicrobium.	Yoon JH, Kang SJ, Jung YT, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.008458-0	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29200

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25622 (see below)

#61079 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56757
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91471

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID410843.1 )

#25622

IJSEM 2260 2009 ( DOI 10.1099/ijs.0.008458-0 , PubMed 19620360 )

* These data were automatically processed and therefore are not curated

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