Marinimicrobium locisalis (KCTC 22484, CCUG 56757, ISL-43)

Name: Marinimicrobium locisalis (KCTC 22484, CCUG 56757, ISL-43)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133497

Type strain

Strain Designation ISL-43

Culture col. no. KCTC 22484 CCUG 56757 ISL-43 ISL -43

NCBI tax ID(s) 546022

Special Collections CCUG KCTC Literature strains

History KCTC <- JH Yoon, KRIBB

Links

Marinimicrobium locisalis ISL-43 is an aerobe, Gram-negative, motile bacterium that was isolated from hypersaline environment.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 410843

KCTC 22484,CCUG 56757

@ref 20215

Last LPSN update 2026-05-29 08:38:06

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Cellvibrionales

Family Cellvibrionaceae

Genus Marinimicrobium

Species Marinimicrobium locisalis

Full scientific name Marinimicrobium locisalis Yoon et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
29200	negative	0.7-3.5 µm	0.2-0.4 µm	rod-shaped
67771	negative

Colony morphology

61079

Incubation period5 days

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
29200	positive	growth	04-40
29200	positive	optimum	30
61079	positive	growth	30
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH
29200	positive	optimum	7.5
29200	positive	growth	6.0-8.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
61079	aerobe
67771	aerobe

Spore formation

@ref	Spore formation	Confidence
29200
125439		99.382

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29200	NaCl	positive	growth	01-18 %
29200	NaCl	positive	optimum	2 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29200	22599 ChEBI	arabinose	+	carbon source
29200	17057 ChEBI	cellobiose	+	carbon source
29200	4853 ChEBI	esculin	+	hydrolysis
29200	28260 ChEBI	galactose	+	carbon source
29200	17234 ChEBI	glucose	+	carbon source
29200	17306 ChEBI	maltose	+	carbon source
29200	17814 ChEBI	salicin	+	carbon source
29200	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
29200	alkaline phosphatase	+	3.1.3.1
29200	catalase	+	1.11.1.6
29200	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Condition	#Saline

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
29200	hypersaline environment
61079	Marine solar saltern sediment	2006	Yellow Sea	Republic of Korea	KOR	Asia
67771	From salten field			Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence EU874388 (>99% sequence identity) for Marinimicrobium locisalis from Microbeatlas

Aquatic Samples	41
Soil Samples	9
Animal Samples	0
Plant Samples	1
Total Samples	51

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3982262v1 assembly for Marinimicrobium locisalis ISL-43	contig	GCA_039822625	546022	61.8

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
29200	Marinimicrobium sp. ISL-43 16S ribosomal RNA gene, partial sequence	EU874388	1486		546022

GC content

29200

GC-content (mol%)58.4

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3982262v1 assembly for Marinimicrobium locisalis ISL-43
NCBI: GCA_039822625

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	80.06	no
125439	motility	BacteriaNetⓘ	yes	50.30	no
125439	gram_stain	BacteriaNetⓘ	negative	83.23	no
125439	spore_formation	BacteriaNetⓘ	no	99.38	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Isolation and characterization of cellulose-mineralizing haloalkaliphilic bacteria from Siberian soda lakes.	Sorokin DY, Merkel AY, Khizhniak TV.	Front Microbiol	10.3389/fmicb.2024.1523074	2024
Enzymology	Inhabited subsurface wet smectites in the hyperarid core of the Atacama Desert as an analog for the search for life on Mars.	Azua-Bustos A, Fairen AG, Silva CG, Carrizo D, Fernandez-Martinez MA, Arenas-Fajardo C, Fernandez-Sampedro M, Gil-Lozano C, Sanchez-Garcia L, Ascaso C, Wierzchos J, Rampe EB.	Sci Rep	10.1038/s41598-020-76302-z	2020
Phylogeny	Marinimicrobium locisalis sp. nov., isolated from a marine solar saltern, and emended description of the genus Marinimicrobium.	Yoon JH, Kang SJ, Jung YT, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.008458-0	2009

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25622	IJSEM 2260 2009 ( DOI 10.1099/ijs.0.008458-0 , PubMed 19620360 )
#29200	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25622
#61079	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56757
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Marinimicrobium locisalis (KCTC 22484, CCUG 56757, ISL-43)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_039822625

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media