Name: Mesorhizobium opportunistum LMG 24607
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133468

Type strain:

Species: Mesorhizobium opportunistum

Culture col. no.: LMG 24607, HAMBI 3007, WSM 2075

NCBI tax ID(s): 593909 (species)

SI-ID 364156

HAMBI 3007, LMG 24607

Section

Mesorhizobium opportunistum LMG 24607 is a Gram-negative, rod-shaped bacterium that was isolated from plant associated.

Gram-negative
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Phyllobacteriaceae*
	Genus	*Mesorhizobium*
	Species	**Mesorhizobium opportunistum**
	Full Scientific Name (LPSN)	Mesorhizobium opportunistum Nandasena et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29081]	Gram stain	negative

[Ref.: #29081]	Cell shape	rod-shaped

Information on culture and growth conditions Culture and growth conditions

	pH	Kind of pH		pH
[Ref.: #29081]			optimum	7.25
[Ref.: #29081]			growth	5.5-9.0

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29081]	arabinose ChEBI	+	carbon source
[Ref.: #29081]	lactose ChEBI	+	carbon source
[Ref.: #29081]	maltose ChEBI	+	carbon source
[Ref.: #29081]	melibiose ChEBI	+	carbon source
[Ref.: #29081]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #29081]	sucrose ChEBI	+	carbon source
[Ref.: #29081]	trehalose ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29081]	Sample type/isolated from	plant associated
* marker position based on {}

Isolation sources categories

#Host

#Plants

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY601515 (>99% sequence identity) for Mesorhizobium from Microbeatlas

Aquatic Samples	8865
Soil Samples	28701
Animal Samples	7451
Plant Samples	4030
Total Samples	49047

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29081]	Mesorhizobium sp. WSM2075 16S ribosomal RNA gene, partial sequence	AY601515	1441	GenBank	536019 tax ID

[Ref.: #29081]

GC-content

63.22 mol%

Availability in culture collections External links

[Ref.: #29081]

Culture collection no.

LMG 24607, HAMBI 3007, WSM 2075

[Ref.: #91451]

SI-ID 364156

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Revision of the taxonomic status of type strains of Mesorhizobium loti and reclassification of strain USDA 3471T as the type strain of Mesorhizobiumerdmanii sp. nov. and ATCC 33669T as the type strain of Mesorhizobiumjarvisii sp. nov.	Martinez-Hidalgo P, Ramirez-Bahena MH, Flores-Felix JD, Rivas R, Igual JM, Mateos PF, Martinez-Molina E, Leon-Barrios M, Peix A, Velazquez E	Int J Syst Evol Microbiol	10.1099/ijs.0.000164	2015	*
Genetics	Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.).	Reeve W, Nandasena K, Yates R, Tiwari R, O'Hara G, Ninawi M, Chertkov O, Goodwin L, Bruce D, Detter C, Tapia R, Han S, Woyke T, Pitluck S, Nolan M, Land M, Copeland A, Liolios K, Pati A, Mavromatis K, Markowitz V, Kyrpides N, Ivanova N, Goodwin L, Meenakshi U, Howieson J	Stand Genomic Sci	10.4056/sigs.4538264	2013	*
Phylogeny	Mesorhizobium australicum sp. nov. and Mesorhizobium opportunistum sp. nov., isolated from Biserrula pelecinus L. in Australia.	Nandasena KG, O'Hara GW, Tiwari RP, Willems A, Howieson JG	Int J Syst Evol Microbiol	10.1099/ijs.0.005728-0	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29081

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25511 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91451

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID364156.1 )

#25511

IJSEM 2140 2009 ( DOI 10.1099/ijs.0.005728-0 , PubMed 19605705 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Mesorhizobium opportunistum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF