Name: Algoriphagus aquatilis A8-7
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133458

Type strain:

Species: Algoriphagus aquatilis

Strain Designation: A8-7

Culture col. no.: CGMCC 1.7030, NBRC 104237

NCBI tax ID(s): 490186 (species)

Special Collections

Literature strains

Section

When using BacDive for research please cite our paper

Algoriphagus aquatilis A8-7 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from freshwater .

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Algoriphagus*
	Species	**Algoriphagus aquatilis**
	Full Scientific Name (LPSN)	Algoriphagus aquatilis Liu et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29061]	Gram stain	negative

[Ref.: #29061]	Cell length	2.8 µm

[Ref.: #29061]	Cell width	0.3 µm

[Ref.: #29061]	Cell shape	rod-shaped

[Ref.: #29061]	Motility	no

[Ref.: #29061]

Pigment production

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #29061]			growth	20-37 °C
[Ref.: #29061]			optimum	30 °C

	pH	Kind of pH		pH
[Ref.: #29061]			optimum	7.5
[Ref.: #29061]			growth	5.5-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29061]

Oxygen tolerance

aerobe

[Ref.: #29061]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29061]		NaCl		growth	0-3	%
[Ref.: #29061]		NaCl		optimum	0.75	%

[Ref.: #29061]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29061]	cellobiose ChEBI	+	carbon source
[Ref.: #29061]	esculin ChEBI	+	hydrolysis
[Ref.: #29061]	fructose ChEBI	+	carbon source
[Ref.: #29061]	galactose ChEBI	+	carbon source
[Ref.: #29061]	glycogen ChEBI	+	carbon source
[Ref.: #29061]	lactose ChEBI	+	carbon source
[Ref.: #29061]	leucine ChEBI	+	carbon source
[Ref.: #29061]	maltose ChEBI	+	carbon source
[Ref.: #29061]	mannose ChEBI	+	carbon source
[Ref.: #29061]	melibiose ChEBI	+	carbon source
[Ref.: #29061]	methyl D-glucoside ChEBI	+	carbon source
[Ref.: #29061]	raffinose ChEBI	+	carbon source
[Ref.: #29061]	ribitol ChEBI	+	carbon source
[Ref.: #29061]	salicin ChEBI	+	carbon source
[Ref.: #29061]	sucrose ChEBI	+	carbon source
[Ref.: #29061]	trehalose ChEBI	+	carbon source
[Ref.: #29061]	tween 20 ChEBI	+	carbon source
[Ref.: #29061]	tween 40 ChEBI	+	carbon source
[Ref.: #29061]	tween 60 ChEBI	+	carbon source
[Ref.: #29061]	tween 80 ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #29061]		hydrogen sulfide ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #29061]	acid phosphatase	+	3.1.3.2
[Ref.: #29061]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29061]	alpha-galactosidase	+	3.2.1.22
[Ref.: #29061]	catalase	+	1.11.1.6
[Ref.: #29061]	cytochrome oxidase	+	1.9.3.1
[Ref.: #29061]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29061]	Sample type/isolated from	freshwater (river, lake, pond)
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU313811 (>99% sequence identity) for Algoriphagus aquatilis from Microbeatlas

Aquatic Samples	204
Soil Samples	5
Animal Samples	6
Plant Samples	2
Total Samples	217

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29061]	Algoriphagus aquatilis strain A8-7 16S ribosomal RNA gene, partial sequence	EU313811	1484	GenBank ENA	490186 tax ID
[Ref.: #124043]	Algoriphagus aquatilis gene for 16S rRNA, partial sequence, strain: NBRC 104237.	AB682160	1448	GenBank ENA	490186 tax ID	*

[Ref.: #29061]

GC-content

43 mol%

Availability in culture collections External links

[Ref.: #29061]

Culture collection no.

CGMCC 1.7030, NBRC 104237

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriphagus sanaruensis sp. nov., a member of the family Cyclobacteriaceae, isolated from a brackish lake in Hamamatsu, Japan.	Maejima Y, Iino T, Muraguchi Y, Ohkuma M, Kimbara K, Shintani M	Int J Syst Evol Microbiol	10.1099/ijsem.0.003447	2019	*
Phylogeny	Algoriphagus shivajiensis sp. nov., isolated from Cochin back water, India.	Kumar PA, Bhumika V, Ritika C, Bhaskar YV, Priyashanth P, Aravind R, Bindu E, Srinivas TN	Syst Appl Microbiol	10.1016/j.syapm.2012.11.006	2013	*
Phylogeny	Algoriphagus aquaeductus sp. nov., isolated from a freshwater pipe.	Rau JE, Blotevogel KH, Fischer U	Int J Syst Evol Microbiol	10.1099/ijs.0.030809-0	2011	*
Phylogeny	Algoriphagus aquatilis sp. nov., isolated from a freshwater lake.	Liu Y, Li H, Jiang JT, Liu YH, Song XF, Xu CJ, Liu ZP	Int J Syst Evol Microbiol	10.1099/ijs.0.005215-0	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29061

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25491 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#124043

Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

#25491

IJSEM 1759 2009 ( DOI 10.1099/ijs.0.005215-0 , PubMed 19542135 )

* These data were automatically processed and therefore are not curated

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