Rhizobium alamii (CFBP 71465, LMG 24466, GBV016)

Name: Rhizobium alamii (CFBP 71465, LMG 24466, GBV016)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133420

Type strain

Strain Designation GBV016

Culture col. no. CFBP 71465 LMG 24466 GBV016

NCBI tax ID(s) 492774

Special Collections Literature strains

Links

Rhizobium alamii GBV016 is an aerobe, Gram-negative, motile bacterium that was isolated from soil.

Gram-negative motile rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 360717

CFBP 7146,LMG 24466

@ref 20215

Last LPSN update 2026-05-29 08:38:05

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Rhizobiaceae

Genus Rhizobium

Species Rhizobium alamii

Full scientific name Rhizobium alamii Berge et al. 2009

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
28886	negative	1 µm	0.7 µm	rod-shaped

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
28886	positive	growth	30

Physiology and metabolism

Oxygen tolerance

28886

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
28886	NaCl	positive	growth	<0.1 %

Observation

28886

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
28886	17126 ChEBI	DL-carnitine	+	carbon source
28886	15740 ChEBI	formate	+	carbon source
28886	33984 ChEBI	fucose	+	carbon source
28886	24148 ChEBI	galactonate	+	carbon source
28886	17234 ChEBI	glucose	+	carbon source
28886	17306 ChEBI	maltose	+	carbon source
28886	29864 ChEBI	mannitol	+	carbon source
28886	33942 ChEBI	ribose	+	carbon source
28886	17992 ChEBI	sucrose	+	carbon source
28886	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
28886	catalase	+	1.11.1.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

28886

Sample typesoil

Taxonmaps

69479

Global distribution of 16S sequence AM931436 (>99% sequence identity) for Rhizobium from Microbeatlas

Aquatic Samples	181
Soil Samples	1145
Animal Samples	198
Plant Samples	366
Total Samples	1890

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score
66792	Rhizobium alamii LMG 24466	complete	2739367696	492774	90.46

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
28886	Rhizobium alamii partial 16S rRNA gene, type strain GBV016T	AM931436	1381		492774
124043	Rhizobium alamii strain LMG 24466 16S ribosomal RNA gene, partial sequence.	MF977621	1376		492774

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Arthrobacter viscosus as Rhizobium viscosum comb. nov.	Flores-Felix JD, Ramirez-Bahena MH, Salazar S, Peix A, Velazquez E	Int J Syst Evol Microbiol	10.1099/ijsem.0.001864	2017
Phylogeny	Rhizobium alamii sp. nov., an exopolysaccharide-producing species isolated from legume and non-legume rhizospheres.	Berge O, Lodhi A, Brandelet G, Santaella C, Roncato MA, Christen R, Heulin T, Achouak W	Int J Syst Evol Microbiol	10.1099/ijs.0.000521-0	2009

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25326	IJSEM 367 2009 ( DOI 10.1099/ijs.0.000521-0 , PubMed 19196780 )
#28886	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25326
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhizobium alamii (CFBP 71465, LMG 24466, GBV016)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

16S sequences

Genome-based predictions

Literature

Literature

References

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