Euzebyella marina CCTCC AB 2014348 is an aerobe, Gram-negative, rod-shaped prokaryote that forms circular colonies and was isolated from seawater from the Yellow Sea.
Gram-negative rod-shaped colony-forming aerobe genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Bacteroidota |
| Class Flavobacteriia |
| Order Flavobacteriales |
| Family Flavobacteriaceae |
| Genus Euzebyella |
| Species Euzebyella marina |
| Full scientific name Euzebyella marina Zhang et al. 2017 |
| @ref | Name | Growth | Composition | |
|---|---|---|---|---|
| 25271 | TYS agar | 0.5 % tryptone, 0.1 % yeast extract, 1.5 % agar and artificial sea water prepared according to another formula (designated ASW2: containing 0.0002 % NH4NO3, 0.0027 % H3BO3, 0.1 % CaCl2, 0.0001 % FePO4, 0.5 % MgCl2, 0.01 % KBr, 0.1 % KCl, 0.02 % NaHCO3, 2.4 % NaCl, 0.0003 % NaF, 0.0002 % Na2SiO3, 0.4 % Na2SO4, 0.0026 % SrCl and distilled water) |
| 67771 | Observationquinones: MK-6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 25271 | 16004 ChEBI | (R)-lactate | +/- | respiration | |
| 25271 | 16651 ChEBI | (S)-lactate | +/- | respiration | |
| 25271 | 64552 ChEBI | 2-hydroxybutyrate | +/- | respiration | |
| 25271 | 16763 ChEBI | 2-oxobutanoate | - | respiration | |
| 25271 | 2-oxogluconate | - | builds acid from | ||
| 25271 | 30916 ChEBI | 2-oxoglutarate | +/- | respiration | |
| 25271 | 37054 ChEBI | 3-hydroxybutyrate | +/- | respiration | |
| 25271 | 73918 ChEBI | 3-O-methyl-D-glucose | - | respiration | |
| 25271 | 18101 ChEBI | 4-hydroxyphenylacetic acid | - | respiration | |
| 25271 | 58143 ChEBI | 5-dehydro-D-gluconate | - | builds acid from | |
| 25271 | 30089 ChEBI | acetate | + | respiration | |
| 25271 | 13705 ChEBI | acetoacetate | +/- | respiration | |
| 25271 | 17128 ChEBI | adipate | - | assimilation | |
| 25271 | 17925 ChEBI | alpha-D-glucose | + | respiration | |
| 25271 | 36219 ChEBI | alpha-lactose | + | respiration | |
| 25271 | 36219 ChEBI | alpha-lactose | +/- | builds acid from | |
| 25271 | 27613 ChEBI | amygdalin | +/- | builds acid from | |
| 25271 | 22599 ChEBI | arabinose | - | assimilation | |
| 25271 | 18305 ChEBI | arbutin | +/- | builds acid from | |
| 25271 | 73706 ChEBI | bromosuccinate | - | respiration | |
| 25271 | 17968 ChEBI | butyrate | - | assimilation | |
| 25271 | casein | - | hydrolysis | ||
| 25271 | 17057 ChEBI | cellobiose | + | builds acid from | |
| 25271 | 17057 ChEBI | cellobiose | + | respiration | |
| 25271 | 16947 ChEBI | citrate | - | assimilation | |
| 25271 | 16947 ChEBI | citrate | +/- | respiration | |
| 25271 | 17108 ChEBI | D-arabinose | +/- | builds acid from | |
| 25271 | 18333 ChEBI | D-arabitol | +/- | builds acid from | |
| 25271 | 18333 ChEBI | D-arabitol | +/- | respiration | |
| 25271 | 29990 ChEBI | D-aspartate | +/- | respiration | |
| 25271 | 15824 ChEBI | D-fructose | + | builds acid from | |
| 25271 | 15824 ChEBI | D-fructose | + | respiration | |
| 25271 | 78697 ChEBI | D-fructose 6-phosphate | +/- | respiration | |
| 25271 | 28847 ChEBI | D-fucose | + | builds acid from | |
| 25271 | 28847 ChEBI | D-fucose | +/- | respiration | |
| 25271 | 12936 ChEBI | D-galactose | + | respiration | |
| 25271 | 12936 ChEBI | D-galactose | +/- | builds acid from | |
| 25271 | 18024 ChEBI | D-galacturonic acid | + | respiration | |
| 25271 | 30612 ChEBI | D-glucarate | - | respiration | |
| 25271 | 8391 ChEBI | D-gluconate | +/- | respiration | |
| 25271 | 17634 ChEBI | D-glucose | + | builds acid from | |
| 25271 | 14314 ChEBI | D-glucose 6-phosphate | +/- | respiration | |
| 25271 | 15748 ChEBI | D-glucuronate | + | respiration | |
| 25271 | 62318 ChEBI | D-lyxose | +/- | builds acid from | |
| 25271 | 15588 ChEBI | D-malate | +/- | respiration | |
| 25271 | 16899 ChEBI | D-mannitol | + | builds acid from | |
| 25271 | 16899 ChEBI | D-mannitol | +/- | respiration | |
| 25271 | 16024 ChEBI | D-mannose | + | builds acid from | |
| 25271 | 16024 ChEBI | D-mannose | + | respiration | |
| 25271 | 16988 ChEBI | D-ribose | +/- | builds acid from | |
| 25271 | 16523 ChEBI | D-serine | - | respiration | |
| 25271 | 17924 ChEBI | D-sorbitol | - | builds acid from | |
| 25271 | 17924 ChEBI | D-sorbitol | +/- | respiration | |
| 25271 | 16443 ChEBI | D-tagatose | +/- | builds acid from | |
| 25271 | 65327 ChEBI | D-xylose | + | builds acid from | |
| 25271 | 23652 ChEBI | dextrin | + | respiration | |
| 25271 | 17113 ChEBI | erythritol | - | builds acid from | |
| 25271 | 4853 ChEBI | esculin | + | hydrolysis | |
| 25271 | 4853 ChEBI | esculin | + | builds acid from | |
| 25271 | 15740 ChEBI | formate | - | respiration | |
| 25271 | 16537 ChEBI | galactarate | +/- | respiration | |
| 25271 | 16813 ChEBI | galactitol | - | builds acid from | |
| 25271 | 16865 ChEBI | gamma-aminobutyric acid | - | respiration | |
| 25271 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 25271 | 5291 ChEBI | gelatin | +/- | respiration | |
| 25271 | 28066 ChEBI | gentiobiose | + | respiration | |
| 25271 | 28066 ChEBI | gentiobiose | +/- | builds acid from | |
| 25271 | 24265 ChEBI | gluconate | - | builds acid from | |
| 25271 | 17234 ChEBI | glucose | - | builds acid from | |
| 25271 | 17234 ChEBI | glucose | - | assimilation | |
| 25271 | 32323 ChEBI | glucuronamide | +/- | respiration | |
| 25271 | 17754 ChEBI | glycerol | - | respiration | |
| 25271 | 17754 ChEBI | glycerol | + | builds acid from | |
| 25271 | 70744 ChEBI | glycine-proline | + | respiration | |
| 25271 | 28087 ChEBI | glycogen | + | builds acid from | |
| 25271 | 17596 ChEBI | inosine | - | respiration | |
| 25271 | 15443 ChEBI | inulin | - | builds acid from | |
| 25271 | 16977 ChEBI | L-alanine | - | respiration | |
| 25271 | 30849 ChEBI | L-arabinose | + | builds acid from | |
| 25271 | 18403 ChEBI | L-arabitol | +/- | builds acid from | |
| 25271 | 16467 ChEBI | L-arginine | + | respiration | |
| 25271 | 29991 ChEBI | L-aspartate | + | respiration | |
| 25271 | 18287 ChEBI | L-fucose | + | respiration | |
| 25271 | 18287 ChEBI | L-fucose | +/- | builds acid from | |
| 25271 | 17464 ChEBI | L-galactonic acid gamma-lactone | +/- | respiration | |
| 25271 | 29985 ChEBI | L-glutamate | + | respiration | |
| 25271 | 15971 ChEBI | L-histidine | - | respiration | |
| 25271 | 15589 ChEBI | L-malate | - | respiration | |
| 25271 | 18183 ChEBI | L-pyroglutamic acid | +/- | respiration | |
| 25271 | 62345 ChEBI | L-rhamnose | + | builds acid from | |
| 25271 | 62345 ChEBI | L-rhamnose | + | respiration | |
| 25271 | 17115 ChEBI | L-serine | - | respiration | |
| 25271 | 17266 ChEBI | L-sorbose | - | builds acid from | |
| 25271 | 65328 ChEBI | L-xylose | - | builds acid from | |
| 25271 | 25115 ChEBI | malate | - | assimilation | |
| 25271 | 17306 ChEBI | maltose | - | assimilation | |
| 25271 | 17306 ChEBI | maltose | + | builds acid from | |
| 25271 | 17306 ChEBI | maltose | + | respiration | |
| 25271 | 29864 ChEBI | mannitol | - | assimilation | |
| 25271 | 37684 ChEBI | mannose | - | assimilation | |
| 25271 | 6731 ChEBI | melezitose | +/- | builds acid from | |
| 25271 | 28053 ChEBI | melibiose | + | builds acid from | |
| 25271 | 28053 ChEBI | melibiose | + | respiration | |
| 25271 | 74611 ChEBI | methyl (R)-lactate | +/- | respiration | |
| 25271 | 320061 ChEBI | methyl alpha-D-glucopyranoside | +/- | builds acid from | |
| 25271 | 43943 ChEBI | methyl alpha-D-mannoside | +/- | builds acid from | |
| 25271 | 320055 ChEBI | methyl beta-D-glucopyranoside | + | respiration | |
| 25271 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | |
| 25271 | 51850 ChEBI | methyl pyruvate | +/- | respiration | |
| 25271 | 17268 ChEBI | myo-inositol | - | builds acid from | |
| 25271 | 17268 ChEBI | myo-inositol | +/- | respiration | |
| 25271 | 63154 ChEBI | N-acetyl-beta-D-mannosamine | +/- | respiration | |
| 25271 | 28037 ChEBI | N-acetylgalactosamine | + | respiration | |
| 25271 | 506227 ChEBI | N-acetylglucosamine | - | assimilation | |
| 25271 | 506227 ChEBI | N-acetylglucosamine | - | builds acid from | |
| 25271 | 506227 ChEBI | N-acetylglucosamine | + | respiration | |
| 25271 | 35418 ChEBI | n-acetylneuraminate | - | respiration | |
| 25271 | 17632 ChEBI | nitrate | - | reduction | |
| 25271 | 17309 ChEBI | pectin | + | respiration | |
| 25271 | 18401 ChEBI | phenylacetate | - | assimilation | |
| 25271 | 32032 ChEBI | potassium gluconate | - | assimilation | |
| 25271 | 17272 ChEBI | propionate | - | respiration | |
| 25271 | 26490 ChEBI | quinate | +/- | respiration | |
| 25271 | 16634 ChEBI | raffinose | + | respiration | |
| 25271 | 16634 ChEBI | raffinose | +/- | builds acid from | |
| 25271 | 15963 ChEBI | ribitol | - | builds acid from | |
| 25271 | 17814 ChEBI | salicin | + | respiration | |
| 25271 | 17814 ChEBI | salicin | +/- | builds acid from | |
| 25271 | 17164 ChEBI | stachyose | + | respiration | |
| 25271 | 28017 ChEBI | starch | - | hydrolysis | |
| 25271 | 28017 ChEBI | starch | + | builds acid from | |
| 25271 | 17992 ChEBI | sucrose | + | builds acid from | |
| 25271 | 17992 ChEBI | sucrose | + | respiration | |
| 25271 | 27082 ChEBI | trehalose | + | builds acid from | |
| 25271 | 27082 ChEBI | trehalose | + | respiration | |
| 25271 | 32528 ChEBI | turanose | + | builds acid from | |
| 25271 | 32528 ChEBI | turanose | + | respiration | |
| 25271 | 53423 ChEBI | tween 40 | - | hydrolysis | |
| 25271 | 53423 ChEBI | tween 40 | +/- | respiration | |
| 25271 | 53425 ChEBI | tween 60 | - | hydrolysis | |
| 25271 | 53426 ChEBI | tween 80 | - | hydrolysis | |
| 25271 | 17151 ChEBI | xylitol | - | builds acid from |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 25271 | acid phosphatase | + | 3.1.3.2 | |
| 25271 | alkaline phosphatase | + | 3.1.3.1 | |
| 25271 | alpha-chymotrypsin | - | 3.4.21.1 | |
| 25271 | alpha-fucosidase | + | 3.2.1.51 | |
| 25271 | alpha-galactosidase | +/- | 3.2.1.22 | |
| 25271 | alpha-glucosidase | +/- | 3.2.1.20 | |
| 25271 | alpha-mannosidase | +/- | 3.2.1.24 | |
| 25271 | arginine dihydrolase | - | 3.5.3.6 | |
| 25271 | beta-galactosidase | + | 3.2.1.23 | |
| 25271 | beta-glucosidase | +/- | 3.2.1.21 | |
| 25271 | beta-glucuronidase | - | 3.2.1.31 | |
| 25271 | catalase | + | 1.11.1.6 | |
| 25271 | cystine arylamidase | +/- | 3.4.11.3 | |
| 25271 | cytochrome oxidase | + | 1.9.3.1 | |
| 25271 | esterase (C 4) | +/- | ||
| 25271 | esterase Lipase (C 8) | + | ||
| 25271 | leucine arylamidase | + | 3.4.11.1 | |
| 25271 | lipase (C 14) | - | ||
| 25271 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | |
| 25271 | naphthol-AS-BI-phosphohydrolase | +/- | ||
| 25271 | trypsin | + | 3.4.21.4 | |
| 25271 | urease | - | 3.5.1.5 | |
| 25271 | valine arylamidase | + |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | quinate degradation | 100 | 2 of 2 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | CMP-KDO biosynthesis | 100 | 4 of 4 | ||
| 66794 | kanosamine biosynthesis II | 100 | 2 of 2 | ||
| 66794 | reductive acetyl coenzyme A pathway | 100 | 7 of 7 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | tetrahydrofolate metabolism | 92.86 | 13 of 14 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | Entner Doudoroff pathway | 90 | 9 of 10 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | phenylalanine metabolism | 84.62 | 11 of 13 | ||
| 66794 | metabolism of amino sugars and derivatives | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | heme metabolism | 78.57 | 11 of 14 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | ||
| 66794 | d-mannose degradation | 77.78 | 7 of 9 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | degradation of sugar acids | 76 | 19 of 25 | ||
| 66794 | ppGpp biosynthesis | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | lactate fermentation | 75 | 3 of 4 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | purine metabolism | 74.47 | 70 of 94 | ||
| 66794 | d-xylose degradation | 72.73 | 8 of 11 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | glutamate and glutamine metabolism | 71.43 | 20 of 28 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | degradation of pentoses | 71.43 | 20 of 28 | ||
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | alanine metabolism | 68.97 | 20 of 29 | ||
| 66794 | pyrimidine metabolism | 68.89 | 31 of 45 | ||
| 66794 | lysine metabolism | 66.67 | 28 of 42 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | flavin biosynthesis | 66.67 | 10 of 15 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | tryptophan metabolism | 65.79 | 25 of 38 | ||
| 66794 | methionine metabolism | 65.38 | 17 of 26 | ||
| 66794 | lipid metabolism | 64.52 | 20 of 31 | ||
| 66794 | glutathione metabolism | 64.29 | 9 of 14 | ||
| 66794 | citric acid cycle | 64.29 | 9 of 14 | ||
| 66794 | vitamin B6 metabolism | 63.64 | 7 of 11 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | arginine metabolism | 62.5 | 15 of 24 | ||
| 66794 | histidine metabolism | 62.07 | 18 of 29 | ||
| 66794 | urea cycle | 61.54 | 8 of 13 | ||
| 66794 | degradation of hexoses | 61.11 | 11 of 18 | ||
| 66794 | gallate degradation | 60 | 3 of 5 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | myo-inositol biosynthesis | 60 | 6 of 10 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | tyrosine metabolism | 57.14 | 8 of 14 | ||
| 66794 | polyamine pathway | 56.52 | 13 of 23 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | sulfate reduction | 53.85 | 7 of 13 | ||
| 66794 | isoprenoid biosynthesis | 53.85 | 14 of 26 | ||
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 50 | 5 of 10 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | oxidative phosphorylation | 47.25 | 43 of 91 | ||
| 66794 | ascorbate metabolism | 45.45 | 10 of 22 | ||
| 66794 | carotenoid biosynthesis | 45.45 | 10 of 22 | ||
| 66794 | daunorubicin biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | 4-hydroxymandelate degradation | 44.44 | 4 of 9 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | coenzyme M biosynthesis | 40 | 4 of 10 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | phenol degradation | 40 | 8 of 20 | ||
| 66794 | androgen and estrogen metabolism | 37.5 | 6 of 16 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | 3-phenylpropionate degradation | 33.33 | 5 of 15 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | arachidonic acid metabolism | 22.22 | 4 of 18 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 124043 | ASM1485551v1 assembly for Euzebyella marina CY01 | contig | 1761453 | 78.24 | |||
| 124043 | ASM4268478v1 assembly for Euzebyella marina KCTC 42440 | scaffold | 1761453 | 75.48 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 25271 | Euzebyella marina strain CY01 16S ribosomal RNA gene, partial sequence | KU174197 | 1489 | 1761453 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 97.20 | no |
| 125439 | motility | BacteriaNetⓘ | no | 66.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 69.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 95.33 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 96.14 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 91.33 | no |
| 125438 | aerobic | aerobicⓘ | yes | 86.92 | no |
| 125438 | thermophilic | thermophileⓘ | no | 99.38 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.53 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Pareuzebyella sediminis gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae, isolated from a tidal flat sediment. | Huang Z, Wei X, Lai Q, Chen S, Yuan J | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004606 | 2020 | |
| Phylogeny | Euzebyella algicola sp. nov., a marine bacterium of the family Flavobacteriaceae, isolated from green algae. | Kwon YM, Kim KW, Kim JYH, Choi TY, Yang SH, Oh CH, Kwon KK, Kim SJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002581 | 2018 | |
| Phylogeny | Euzebyella marina sp. nov., isolated from seawater. | Zhang YJ, Zhao JR, Zhang XY, Chen GZ, Zhou MY, Mo XH, He HL, Chen S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001712 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #25271 | Y. J. Z. Zhang, J. R.,Zhang, X. Y.,Chen, G. Z.,Zhou, M. Y.,Mo, X. H.,He, H. L.,Chen, S.: Euzebyella marina sp. nov., isolated from seawater. IJSEM 67: 920 - 924 2017 ( DOI 10.1099/ijsem.0.001712 , PubMed 27911255 ) |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67771 | Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC; |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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