Name: Saccharopolyspora aidingensis CCTCC AA 2012014
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133357

Type strain:

Species: Saccharopolyspora aidingensis

Culture col. no.: CCTCC AA 2012014, JCM 30185, TRM 46074

Strain history: L.-L. Zhang; Tarim Univ., China; TRM 46074.

NCBI tax ID(s): 1224632 (species)

Section

Saccharopolyspora aidingensis CCTCC AA 2012014 is an aerobe, halophilic, spore-forming bacterium that builds a substrate mycelium and was isolated from sediment sample.

Gram-positive
spore-forming
aerobe
halophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Saccharopolyspora*
	Species	**Saccharopolyspora aidingensis**
	Full Scientific Name (LPSN)	Saccharopolyspora aidingensis Xia et al. 2017

	Synonym	Salinifilum aidingense
	Synonym	Salinifilum aidingensis

Information on morphological and physiological properties Morphology

[Ref.: #25236]	Gram stain	positive
[Ref.: #43930]	Gram stain	positive

[Ref.: #25236]	Motility	no

[Ref.: #25236]	Multicellular complex forming ability	yes
[Ref.: #25236]	Multicellular complex name	substrate mycelium
[Ref.: #25236]	Multicellular complex color	colorless or light-yellow
[Ref.: #25236]	Medium Name (multicellularity)	Czapek’s agar medium
[Ref.: #25236]	Multicellular complex further description	branched and well developed

[Ref.: #25236]	Multicellular complex forming ability	yes
[Ref.: #25236]	Multicellular complex name	aerial mycelium
[Ref.: #25236]	Multicellular complex color	white
[Ref.: #25236]	Medium Name (multicellularity)	Czapek’s agar medium
[Ref.: #25236]	Multicellular complex further description	sparse, fewer branches

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25236]

Culture medium

ISP medium 6

[Ref.: #25236]

Culture medium growth

[Ref.: #25236]

Culture medium

ISP medium 7

[Ref.: #25236]

Culture medium growth

[Ref.: #25236]

Culture medium

ISP medium 1

[Ref.: #25236]

Culture medium growth

		Temperature
[Ref.: #25236]	growth	25-45 °C
[Ref.: #25236]	optimum	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #25236]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25236]			optimum	7
[Ref.: #25236]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25236]	Oxygen tolerance	aerobe
[Ref.: #43930]	Oxygen tolerance	aerobe

[Ref.: #25236]	Spore description	long chains of spores, non-motile, oval or spherical in shape, rough or smooth surface
[Ref.: #25236]	Ability of spore formation	yes

[Ref.: #25236]	Halophily / tolerance level	halophilic
[Ref.: #43930]	Halophily / tolerance level	halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25236]		NaCl		growth	8-18	%(w/v)
[Ref.: #25236]		NaCl		optimum	12	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-10(H₈), MK-10(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25236]	alpha-lactose ChEBI	+	carbon source
[Ref.: #25236]	calcium malate	-	assimilation
[Ref.: #25236]	casein	-	hydrolysis
[Ref.: #25236]	cellobiose ChEBI	-	assimilation
[Ref.: #25236]	cellulose ChEBI	-	degradation
[Ref.: #25236]	chitin ChEBI	-	hydrolysis
[Ref.: #25236]	D-arabinose ChEBI	-	assimilation
[Ref.: #25236]	esculin ChEBI	-	hydrolysis
[Ref.: #25236]	fructose ChEBI	+	carbon source
[Ref.: #25236]	galactose ChEBI	+	carbon source
[Ref.: #25236]	gelatin ChEBI	-	degradation
[Ref.: #25236]	glucose ChEBI	+	carbon source
[Ref.: #25236]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #25236]	maltose ChEBI	+	carbon source
[Ref.: #25236]	mannose ChEBI	-	assimilation
[Ref.: #25236]	myo-inositol ChEBI	+	carbon source
[Ref.: #25236]	nitrate ChEBI	-	reduction
[Ref.: #25236]	raffinose ChEBI	-	assimilation
[Ref.: #25236]	rhamnose ChEBI	+	carbon source
[Ref.: #25236]	skimmed milk	-	fermentation
[Ref.: #25236]	sodium succinate ChEBI	-	assimilation
[Ref.: #25236]	sorbose ChEBI	+	carbon source
[Ref.: #25236]	starch ChEBI	-	hydrolysis
[Ref.: #25236]	starch ChEBI	+	carbon source
[Ref.: #25236]	urea ChEBI	+	degradation
[Ref.: #25236]	xanthine ChEBI	-	hydrolysis
[Ref.: #25236]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25236]		hydrogen sulfide ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #25236]	catalase	+	1.11.1.6
[Ref.: #25236]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25236]	lipase	+

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25236]

Fatty acid	Percentage
C17:0 anteiso	28.8
C15:0 iso	20.3
C16:0 iso	12
C17:0 iso	10.2
C15:0 anteiso	6.6
C17:1 iso ω9c	4.3
C16:1 iso	3.5
C15:1 iso	2
C17:1 anteiso	1.6
C17:0	1.4
C14:0 iso	1.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25236]	Sample type/isolated from	sediment sample
[Ref.: #25236]	Geographic location (country and/or sea, region)	Aiding Lake, Gobi desert, Xinjiang province
[Ref.: #25236]	Country	China
[Ref.: #25236]	Country ISO 3 Code	CHN
[Ref.: #25236]	Continent	Asia
[Ref.: #25236]	Geographic location	42.6590°/89.2660°
[Ref.: #25236]	Enrichment culture	chitin-asparagine medium
[Ref.: #25236]	Enrichment culture composition	supplemented with 15 % NaCl
[Ref.: #25236]	Enrichment culture duration	15 days
[Ref.: #25236]	Enrichment culture temperature	37 ̊C
[Ref.: #25236]	Isolation/enrichment procedure	standard dilution plate method

[Ref.: #43930]	Sample type/isolated from	Aiding salt lake, China
[Ref.: #43930]	Country	China
[Ref.: #43930]	Country ISO 3 Code	CHN
[Ref.: #43930]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Sediment of Aiding salt lake in Turpan Basin
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sediment
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX193858 (>99% sequence identity) for Salinifilum from Microbeatlas

Aquatic Samples	45
Soil Samples	74
Animal Samples	455
Plant Samples	14
Total Samples	588

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25236]	Saccharomonospora sp. 46074 16S ribosomal RNA gene, partial sequence	JX193858	1516	GenBank	1224632 tax ID

[Ref.: #25236]

GC-content

70.9 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #25236]

Culture collection no.

CCTCC AA 2012014, JCM 30185, TRM 46074

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Saccharopolyspora aidingensis sp. nov., an actinomycete isolated from a salt lake.	Xia ZF, Luo XX, Wan CX, Zhang LL	Int J Syst Evol Microbiol	10.1099/ijsem.0.001696	2017	*
Phylogeny	Salinifilum gen. nov., with description of Salinifilum proteinilyticum sp. nov., an extremely halophilic actinomycete isolated from Meighan wetland, Iran, and reclassification of Saccharopolyspora aidingensis as Salinifilum aidingensis comb. nov. and Saccharopolyspora ghardaiensis as Salinifilum ghardaiensis comb. nov.	Moshtaghi Nikou M, Ramezani M, Harirchi S, Makzoom S, Amoozegar MA, Shahzadeh Fazeli SA, Schumann P, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijsem.0.002286	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25236

Z.-F. L. Xia, Xiao-Xia,Wan, Chuan-Xing,Zhang, Li-Li: Saccharopolyspora aidingensis sp. nov., an actinomycete isolated from a salt lake. IJSEM 67: 687 - 691 2017 ( DOI 10.1099/ijsem.0.001696 , PubMed 29144232 )

#43930

Mahdi Moshtaghi Nikou, Mohaddaseh Ramezani, Sharareh Harirchi, Somayyeh Makzoom, Mohammad Ali Amoozegar, Seyed Abolhassan Shahzadeh Fazeli, Peter Schumann, Antonio Ventosa: Salinifilum gen. nov., with description of Salinifilum proteinilyticum sp. nov., an extremely halophilic actinomycete isolated from Meighan wetland, Iran, and reclassification of Saccharopolyspora aidingensis as Salinifilum aidingensis comb. nov. and Saccharopolyspora ghardaiensis as Salinifilum ghardaiensis comb. nov. IJSEM 67: 4221 - 4227 2017 ( DOI 10.1099/ijsem.0.002286 , PubMed 28920832 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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