Name: Aquimarina versatilis CBA3207
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133335

Type strain:

Species: Aquimarina versatilis

Strain Designation: CBA3207

Culture col. no.: KACC 17666, JCM 19528

Strain history: S.-J. Lee CBA3207 <-- S. W. Roh.

NCBI tax ID(s): 1417658 (species)

Section

Aquimarina versatilis CBA3207 is an aerobe, chemoorganotroph, mesophilic bacterium that forms circular colonies and was isolated from seashore sand.

colony-forming
Gram-negative
rod-shaped
aerobe
chemoorganotroph
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Aquimarina*
	Species	**Aquimarina versatilis**
	Full Scientific Name (LPSN)	Aquimarina versatilis Lee et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25172]	Gram stain	negative

[Ref.: #25172]	Cell length	1.0-2.0 µm

[Ref.: #25172]	Cell width	0.2-0.4 µm

[Ref.: #25172]	Cell shape	rod-shaped

[Ref.: #25172]	Motility	no

[Ref.: #25172]	Colony size	0.5-2.0 mm
[Ref.: #25172]	Colony color	orange
[Ref.: #25172]	Colony shape	circular
[Ref.: #25172]	Incubation period	3 days
[Ref.: #25172]	Cultivation medium used	marine agar (MA)

[Ref.: #25172]	Pigment production	no
[Ref.: #25172]	Pigment name	Flexirubin

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25172]

Culture medium

marine agar (MA)

[Ref.: #25172]

Culture medium growth

		Temperature
[Ref.: #25172]	optimum	25.0-30.0 °C
[Ref.: #25172]	growth	10.0-40.0 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #25172]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25172]			optimum	7.0-7.5
[Ref.: #25172]			growth	6.5-10.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25172]

Oxygen tolerance

aerobe

[Ref.: #25172]

Nutrition type

chemoorganotroph

[Ref.: #25172]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25172]		NaCl		optimum	3.0-4.0	%(w/v)
[Ref.: #25172]		NaCl		growth	1.0-4.0	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25172]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #25172]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #25172]	amygdalin ChEBI	+	builds acid from
[Ref.: #25172]	arbutin ChEBI	-	builds acid from
[Ref.: #25172]	cellobiose ChEBI	+	builds acid from
[Ref.: #25172]	D-arabinose ChEBI	-	builds acid from
[Ref.: #25172]	D-arabitol ChEBI	-	builds acid from
[Ref.: #25172]	D-fructose ChEBI	-	builds acid from
[Ref.: #25172]	D-fucose ChEBI	-	builds acid from
[Ref.: #25172]	D-galactose ChEBI	+	builds acid from
[Ref.: #25172]	D-glucose ChEBI	+	builds acid from
[Ref.: #25172]	D-lyxose ChEBI	-	builds acid from
[Ref.: #25172]	D-mannitol ChEBI	-	builds acid from
[Ref.: #25172]	D-mannose ChEBI	+	builds acid from
[Ref.: #25172]	D-ribose ChEBI	-	builds acid from
[Ref.: #25172]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #25172]	D-tagatose ChEBI	-	builds acid from
[Ref.: #25172]	D-trehalose ChEBI	+	builds acid from
[Ref.: #25172]	D-xylose ChEBI	-	builds acid from
[Ref.: #25172]	erythritol ChEBI	-	builds acid from
[Ref.: #25172]	esculin ChEBI	+	builds acid from
[Ref.: #25172]	galactitol ChEBI	-	builds acid from
[Ref.: #25172]	gelatin ChEBI	+	hydrolysis
[Ref.: #25172]	gentiobiose ChEBI	-	builds acid from
[Ref.: #25172]	gluconate ChEBI	-	builds acid from
[Ref.: #25172]	glucose ChEBI	-	fermentation
[Ref.: #25172]	glycerol ChEBI	-	builds acid from
[Ref.: #25172]	glycogen ChEBI	+	builds acid from
[Ref.: #25172]	inulin ChEBI	-	builds acid from
[Ref.: #25172]	L-arabinose ChEBI	-	builds acid from
[Ref.: #25172]	L-arabitol ChEBI	-	builds acid from
[Ref.: #25172]	L-fucose ChEBI	-	builds acid from
[Ref.: #25172]	L-rhamnose ChEBI	+	builds acid from
[Ref.: #25172]	L-sorbose ChEBI	-	builds acid from
[Ref.: #25172]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #25172]	L-xylose ChEBI	-	builds acid from
[Ref.: #25172]	lactose ChEBI	-	builds acid from
[Ref.: #25172]	maltose ChEBI	+	builds acid from
[Ref.: #25172]	melezitose ChEBI	-	builds acid from
[Ref.: #25172]	melibiose ChEBI	-	builds acid from
[Ref.: #25172]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #25172]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #25172]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #25172]	myo-inositol ChEBI	-	builds acid from
[Ref.: #25172]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #25172]	nitrate ChEBI	-	reduction
[Ref.: #25172]	raffinose ChEBI	-	builds acid from
[Ref.: #25172]	ribitol ChEBI	-	builds acid from
[Ref.: #25172]	salicin ChEBI	-	builds acid from
[Ref.: #25172]	starch ChEBI	+	hydrolysis
[Ref.: #25172]	starch ChEBI	+	builds acid from
[Ref.: #25172]	sucrose ChEBI	+	builds acid from
[Ref.: #25172]	tryptophan ChEBI	-	energy source
[Ref.: #25172]	turanose ChEBI	-	builds acid from
[Ref.: #25172]	tween 20 ChEBI	+	hydrolysis
[Ref.: #25172]	tween 40 ChEBI	+	hydrolysis
[Ref.: #25172]	tween 80 ChEBI	+	hydrolysis
[Ref.: #25172]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25172]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #25172]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #25172]	acid phosphatase	+	3.1.3.2
[Ref.: #25172]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25172]	alpha-fucosidase	-	3.2.1.51
[Ref.: #25172]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25172]	alpha-glucosidase	-	3.2.1.20
[Ref.: #25172]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25172]	arginine dihydrolase	-	3.5.3.6
[Ref.: #25172]	beta-galactosidase	-	3.2.1.23
[Ref.: #25172]	beta-glucosidase	+	3.2.1.21
[Ref.: #25172]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25172]	catalase	+	1.11.1.6
[Ref.: #25172]	cystine arylamidase	-	3.4.11.3
[Ref.: #25172]	cytochrome oxidase	-	1.9.3.1
[Ref.: #25172]	esterase (C 4)	-
[Ref.: #25172]	esterase Lipase (C 8)	-
[Ref.: #25172]	leucine arylamidase	+	3.4.11.1
[Ref.: #25172]	lipase (C 14)	-
[Ref.: #25172]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #25172]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25172]	trypsin	-	3.4.21.4
[Ref.: #25172]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25172]	urease	-	3.5.1.5
[Ref.: #25172]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25172]

Fatty acid	Percentage
C15:0 iso	25.9
C17:0 iso 3OH	24.5
C15:1 iso G	12.4
10-Methyl C16:0 / iso-C17:1ω9c	10.9
C16:1ω7c / C16:1ω6c	6.6
C15:0 iso 3OH	4
C16:0 iso 3OH	2.8
C15:1ω6c	2.3
C16:0 iso	2.3
C17:1ω8c	1.3

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25172]	Sample type/isolated from	seashore sand
[Ref.: #25172]	Geographic location (country and/or sea, region)	Jeju island
[Ref.: #25172]	Country	Republic of Korea
[Ref.: #25172]	Country ISO 3 Code	KOR
[Ref.: #25172]	Continent	Asia
[Ref.: #25172]	Geographic location	33.0000°/126.0000°
[Ref.: #25172]	Enrichment culture	marine agar 2216 (MA; BD)
[Ref.: #25172]	Enrichment culture duration	14 days
[Ref.: #25172]	Enrichment culture temperature	25 ̊C

[Ref.: #67770]	Sample type/isolated from	Seashore sand of Jeju island
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sandy
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF612582 (>99% sequence identity) for Aquimarina versatilis subclade from Microbeatlas

Aquatic Samples	75
Soil Samples	10
Animal Samples	20
Plant Samples	1
Total Samples	106

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25172]	Aquimarina sp. CBA3207 16S ribosomal RNA gene, partial sequence	KF612582	1351	GenBank	1417658 tax ID

[Ref.: #25172]

GC-content

38.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #25172]

Culture collection no.

KACC 17666, JCM 19528

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquimarina versatilis sp. nov., isolated from seashore sand, and emended description of the genus Aquimarina.	Lee JK, Cha IT, Kim M, Choi BG, Song HS, Kim JY, Roh SW, Lee SJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001645	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25172

J. K. C. Lee, I. T.,Kim, M.,Choi, B. G.,Song, H. S.,Kim, J. Y.,Roh, S. W.,Lee, S. J.: Aquimarina versatilis sp. nov., isolated from seashore sand, and emended description of the genus Aquimarina. IJSEM 67: 411 - 416 2017 ( DOI 10.1099/ijsem.0.001645 , PubMed 27902250 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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