Name: Flavobacterium luticocti xz20
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133332

Type strain:

Species: Flavobacterium luticocti

Strain Designation: xz20

Culture col. no.: CCTCC AB 2015421, JCM 31174

Strain history: H. Liu; Anhui Normal Univ., China; xz20.

NCBI tax ID(s): 1852971 (species)

Section

Flavobacterium luticocti xz20 is a Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from municipal wastewater treatment plant.

colony-forming
Gram-negative
rod-shaped
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium luticocti**
	Full Scientific Name (PNU)	Flavobacterium luticocti Liu et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25182]	Gram stain	negative
[Ref.: #25182]	Cell length	1.3-1.7 µm
[Ref.: #25182]	Cell width	0.4-0.6 µm
[Ref.: #25182]	Cell shape	rod-shaped
[Ref.: #25182]	Motility	no

[Ref.: #25182]	Colony color	pale yellow
[Ref.: #25182]	Colony shape	circular
[Ref.: #25182]	Cultivation medium used	LB agar

[Ref.: #25182]	Pigment production	no
[Ref.: #25182]	Pigment name	Flexirubin-type

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25182]

Culture medium

tryptic soy agar (TSA)

[Ref.: #25182]

Culture medium growth

[Ref.: #25182]

Culture medium

LB (Luria-Bertani) MEDIUM

[Ref.: #25182]

Culture medium growth

	Kind of temperature		Temperature
[Ref.: #25182]		growth	15.0-40.0 °C
[Ref.: #25182]		optimum	25.0-37.0 °C
[Ref.: #25182]	no	growth	10 °C
[Ref.: #25182]	no	growth	42 °C
[Ref.: #67770]		growth	30 °C

[Ref.: #25182]	Temperature range	mesophilic
[Ref.: #25182]	Temperature range	psychrophilic
[Ref.: #25182]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25182]			optimum	7
[Ref.: #25182]			growth	6.0-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25182]

Ability of spore formation

	Salt	Tested relation		Salt conc.
[Ref.: #25182]	NaCl		optimum	1.0-2.0	%
[Ref.: #25182]	NaCl	no	growth	4	%
[Ref.: #25182]	NaCl		growth	0.0-3.0	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25182]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #25182]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #25182]	adipate ChEBI	-	assimilation
[Ref.: #25182]	amygdalin ChEBI	-	builds acid from
[Ref.: #25182]	arbutin ChEBI	-	builds acid from
[Ref.: #25182]	cellobiose ChEBI	-	builds acid from
[Ref.: #25182]	D-arabinose ChEBI	-	builds acid from
[Ref.: #25182]	D-arabitol ChEBI	-	builds acid from
[Ref.: #25182]	D-fructose ChEBI	-	builds acid from
[Ref.: #25182]	D-fucose ChEBI	-	builds acid from
[Ref.: #25182]	D-galactose ChEBI	-	builds acid from
[Ref.: #25182]	D-glucose ChEBI	-	fermentation
[Ref.: #25182]	D-glucose ChEBI	-	assimilation
[Ref.: #25182]	D-glucose ChEBI	-	builds acid from
[Ref.: #25182]	D-lyxose ChEBI	-	builds acid from
[Ref.: #25182]	D-mannitol ChEBI	-	assimilation
[Ref.: #25182]	D-mannitol ChEBI	-	builds acid from
[Ref.: #25182]	D-mannose ChEBI	-	assimilation
[Ref.: #25182]	D-mannose ChEBI	-	builds acid from
[Ref.: #25182]	D-ribose ChEBI	-	builds acid from
[Ref.: #25182]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #25182]	D-tagatose ChEBI	-	builds acid from
[Ref.: #25182]	D-trehalose ChEBI	-	builds acid from
[Ref.: #25182]	D-xylose ChEBI	-	builds acid from
[Ref.: #25182]	decanoate ChEBI	-	assimilation
[Ref.: #25182]	erythritol ChEBI	-	builds acid from
[Ref.: #25182]	esculin ChEBI	-	builds acid from
[Ref.: #25182]	esculin ChEBI	+	hydrolysis
[Ref.: #25182]	galactitol ChEBI	-	builds acid from
[Ref.: #25182]	gelatin ChEBI	+	hydrolysis
[Ref.: #25182]	gentiobiose ChEBI	-	builds acid from
[Ref.: #25182]	gluconate ChEBI	-	builds acid from
[Ref.: #25182]	glycerol ChEBI	-	builds acid from
[Ref.: #25182]	glycogen ChEBI	-	builds acid from
[Ref.: #25182]	inulin ChEBI	-	builds acid from
[Ref.: #25182]	L-arabinose ChEBI	-	assimilation
[Ref.: #25182]	L-arabinose ChEBI	-	builds acid from
[Ref.: #25182]	L-arabitol ChEBI	-	builds acid from
[Ref.: #25182]	L-fucose ChEBI	-	builds acid from
[Ref.: #25182]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #25182]	L-sorbose ChEBI	-	builds acid from
[Ref.: #25182]	L-xylose ChEBI	-	builds acid from
[Ref.: #25182]	lactose ChEBI	-	builds acid from
[Ref.: #25182]	malate ChEBI	-	assimilation
[Ref.: #25182]	maltose ChEBI	-	builds acid from
[Ref.: #25182]	maltose ChEBI	-	assimilation
[Ref.: #25182]	melezitose ChEBI	-	builds acid from
[Ref.: #25182]	melibiose ChEBI	-	builds acid from
[Ref.: #25182]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #25182]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #25182]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #25182]	myo-inositol ChEBI	-	builds acid from
[Ref.: #25182]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #25182]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #25182]	nitrate ChEBI	-	reduction
[Ref.: #25182]	phenylacetate ChEBI	-	assimilation
[Ref.: #25182]	potassium gluconate ChEBI	-	assimilation
[Ref.: #25182]	raffinose ChEBI	-	builds acid from
[Ref.: #25182]	ribitol ChEBI	-	builds acid from
[Ref.: #25182]	salicin ChEBI	-	builds acid from
[Ref.: #25182]	sodium citrate ChEBI	-	assimilation
[Ref.: #25182]	starch ChEBI	-	builds acid from
[Ref.: #25182]	sucrose ChEBI	-	builds acid from
[Ref.: #25182]	tryptophan ChEBI	-	energy source
[Ref.: #25182]	turanose ChEBI	-	builds acid from
[Ref.: #25182]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #25182]		indole ChEBI

	Physiological tests	Metabolite	Indole test
[Ref.: #25182]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #25182]	acid phosphatase	+	3.1.3.2
[Ref.: #25182]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25182]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #25182]	alpha-fucosidase	-	3.2.1.51
[Ref.: #25182]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25182]	alpha-glucosidase	-	3.2.1.20
[Ref.: #25182]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25182]	arginine dihydrolase	+	3.5.3.6
[Ref.: #25182]	beta-galactosidase	-	3.2.1.23
[Ref.: #25182]	beta-glucosidase	-	3.2.1.21
[Ref.: #25182]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25182]	catalase	+	1.11.1.6
[Ref.: #25182]	cystine arylamidase	+	3.4.11.3
[Ref.: #25182]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25182]	esterase (C 4)	+
[Ref.: #25182]	esterase Lipase (C 8)	+
[Ref.: #25182]	leucine arylamidase	+	3.4.11.1
[Ref.: #25182]	lipase (C 14)	+
[Ref.: #25182]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #25182]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25182]	trypsin	+	3.4.21.4
[Ref.: #25182]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25182]	urease	-	3.5.1.5
[Ref.: #25182]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25182]

Fatty acid	Percentage
C15:0 iso	46.6
C15:1 iso G	20.5
C17:1 iso ω9c / C16:0 10-methyl	8.2
C15:0 iso 3OH	4.6
C15:0 anteiso	3.6
C17:0 iso 3OH	3.5
C16:0 iso 3OH	2.7
C16:0 iso	2
C13:0 iso	1.7
C16:0	0.8
C14:0 iso	0.7
C16:1ω7c / C16:1ω6c	0.7
C16:1 iso G	0.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25182]	Sample type/isolated from	municipal wastewater treatment plant
[Ref.: #25182]	Geographic location (country and/or sea, region)	Xuzhou, Jiangsu
[Ref.: #25182]	Country	China
[Ref.: #25182]	Country ISO 3 Code	CHN
[Ref.: #25182]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Wastewater of a municipal wastewater treatment plant in Xuzhou
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Water treatment plant

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KU746271 (>99% sequence identity) for Flavobacterium luticocti subclade from Microbeatlas

Aquatic Samples	4208
Soil Samples	314
Animal Samples	763
Plant Samples	62
Total Samples	5347

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25182]	Flavobacterium sp. xz20 16S ribosomal RNA gene, partial sequence	KU746271	1479	GenBank	1852971 tax ID

[Ref.: #25182]

GC-content

32.9 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #25182]

Culture collection no.

CCTCC AB 2015421, JCM 31174

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium luticocti sp. nov., isolated from wastewater.	Liu H, Lu P, Jin L, Zhu G	Int J Syst Evol Microbiol	10.1099/ijsem.0.001634	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25182

H. L. Liu, P.,Jin, L.,Zhu, G.: Flavobacterium luticocti sp. nov., isolated from wastewater. IJSEM 67: 369 - 373 2017 ( DOI 10.1099/ijsem.0.001634 , PubMed 27902260 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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