Novosphingobium bradum | Type strain | STM-24, BCRC 80925, LMG 29291, KCTC 42984

Strain identifier

BacDive ID: 133280

Type strain:

Species: Novosphingobium bradum

Culture col. no.: STM-24 , BCRC 80925, LMG 29291, KCTC 42984

Section

Name and taxonomic classification
Morphology
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Sequence information

External links

Novosphingobium bradum STM-24 is an aerobe, chemoheterotroph, gram-negative bacterium that forms circular colonies and was isolated from spring.

colony-forming
gram-negative
rod-shaped
aerobe
chemoheterotroph
16S sequence
Bacteria

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Alphaproteobacteria
	Order	Sphingomonadales
	Family	Erythrobacteraceae
	Genus	Novosphingobium
	Species	Novosphingobium bradum
	Full Scientific Name (PNU)	Novosphingobium bradum Sheu et al. 2016

Information on morphological and physiological propertiesMorphology

[Ref.: #25119]	Gram stain	negative
[Ref.: #25119]	Cell length	0.8-2.0 µm
[Ref.: #25119]	Cell width	0.5-0.8 µm
[Ref.: #25119]	Cell shape	rod-shaped
[Ref.: #25119]	Motility	no

[Ref.: #25119]	Colony size	0.3-0.5 mm
[Ref.: #25119]	Colony color	light yellow
[Ref.: #25119]	Colony shape	circular
[Ref.: #25119]	Cultivation medium used	R2A agar (Reasoner's 2A agar)

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #25119]

Culture medium

NA (Nutrient Agar)

[Ref.: #25119]

Culture medium growth

[Ref.: #25119]

Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #25119]			growth	15.0-30.0 ̊C
[Ref.: #25119]			optimum	20 ̊C

[Ref.: #25119]

Temperature range

psychrophilic

	pH	Kind of pH		pH
[Ref.: #25119]			optimum	6
[Ref.: #25119]			growth	5.0-9.0

Information on physiology and metabolismPhysiology and metabolism

[Ref.: #25119]

Oxygen tolerance

aerobe

[Ref.: #25119]

Nutrition type

chemoheterotroph

[Ref.: #25119]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25119]		NaCl		growth	0.0-0.5	%
[Ref.: #25119]		NaCl		optimum	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25119]	acetate ChEBI	-	carbon source
[Ref.: #25119]	adipate ChEBI	-	carbon source
[Ref.: #25119]	butyrate ChEBI	-	carbon source
[Ref.: #25119]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #25119]	casein	+	hydrolysis
[Ref.: #25119]	chitin ChEBI	-	hydrolysis
[Ref.: #25119]	citrate ChEBI	+	carbon source
[Ref.: #25119]	corn oil	-	hydrolysis
[Ref.: #25119]	D-fructose ChEBI	-	carbon source
[Ref.: #25119]	D-galactose ChEBI	-	carbon source
[Ref.: #25119]	D-glucose ChEBI	+	carbon source
[Ref.: #25119]	D-mannitol ChEBI	+	carbon source
[Ref.: #25119]	D-mannose ChEBI	-	carbon source
[Ref.: #25119]	D-rhamnose ChEBI	+	carbon source
[Ref.: #25119]	D-sorbitol ChEBI	+	carbon source
[Ref.: #25119]	dna ChEBI	-	hydrolysis
[Ref.: #25119]	esculin ChEBI	+	hydrolysis
[Ref.: #25119]	gelatin ChEBI	-	hydrolysis
[Ref.: #25119]	gluconate ChEBI	+	carbon source
[Ref.: #25119]	glucose ChEBI	-	fermentation
[Ref.: #25119]	L-alanine ChEBI	+	carbon source
[Ref.: #25119]	L-arabinose ChEBI	-	carbon source
[Ref.: #25119]	L-proline ChEBI	+	carbon source
[Ref.: #25119]	L-rhamnose ChEBI	+	carbon source
[Ref.: #25119]	malate ChEBI	-	carbon source
[Ref.: #25119]	maltose ChEBI	+	carbon source
[Ref.: #25119]	melibiose ChEBI	-	carbon source
[Ref.: #25119]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #25119]	nitrate ChEBI	-	reduction
[Ref.: #25119]	starch ChEBI	-	hydrolysis
[Ref.: #25119]	sucrose ChEBI	+	carbon source
[Ref.: #25119]	trehalose ChEBI	+	carbon source
[Ref.: #25119]	tryptophan ChEBI	-	energy source
[Ref.: #25119]	tween 20 ChEBI	-	hydrolysis
[Ref.: #25119]	tween 40 ChEBI	-	hydrolysis
[Ref.: #25119]	tween 60 ChEBI	-	hydrolysis
[Ref.: #25119]	tween 80 ChEBI	+	hydrolysis
[Ref.: #25119]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #25119]	ampicillin ChEBI	yes
[Ref.: #25119]	chloramphenicol ChEBI	yes
[Ref.: #25119]	gentamicin ChEBI	yes
[Ref.: #25119]	kanamycin ChEBI	yes
[Ref.: #25119]	nalidixic acid ChEBI		yes
[Ref.: #25119]	novobiocin ChEBI	yes
[Ref.: #25119]	penicillin g ChEBI	yes
[Ref.: #25119]	rifampicin ChEBI	yes
[Ref.: #25119]	streptomycin ChEBI		yes
[Ref.: #25119]	tetracycline ChEBI	yes

	Antibiotica	Group ID of combined antibiotics	Metabolite	Antibiotic sensitivity
[Ref.: #25119]		25	sulfamerazine ChEBI	yes
[Ref.: #25119]		25	trimethoprim ChEBI	yes

	Metabolite production	Metabolite	Production
[Ref.: #25119]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #25119]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #25119]	acid phosphatase	+	3.1.3.2
[Ref.: #25119]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25119]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #25119]	alpha-fucosidase	-	3.2.1.51
[Ref.: #25119]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25119]	alpha-glucosidase	+	3.2.1.20
[Ref.: #25119]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25119]	arginine dihydrolase	-	3.5.3.6
[Ref.: #25119]	beta-galactosidase	+	3.2.1.23
[Ref.: #25119]	beta-glucosidase	+	3.2.1.21
[Ref.: #25119]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25119]	catalase	-	1.11.1.6
[Ref.: #25119]	cystine arylamidase	-	3.4.11.3
[Ref.: #25119]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25119]	esterase (C 4)	+
[Ref.: #25119]	esterase Lipase (C 8)	+
[Ref.: #25119]	leucine arylamidase	+	3.4.11.1
[Ref.: #25119]	lipase (C 14)	+
[Ref.: #25119]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #25119]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25119]	trypsin	-	3.4.21.4
[Ref.: #25119]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25119]	urease	-	3.5.1.5
[Ref.: #25119]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #25119]	Sample type/isolated from	spring
[Ref.: #25119]	Geographic location (country and/or sea, region)	vicinity of Miaoli County
[Ref.: #25119]	Country	Taiwan
[Ref.: #25119]	Country ISO 3 Code	TWN
[Ref.: #25119]	Continent	Asia
[Ref.: #25119]	Geographic location	24.5600°/120.8200°

Isolation sources categories

#Environmental

#Aquatic

#Spring

What are isolation sources categories?

* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25119]	Novosphingobium sp. STM-24 partial 16S rRNA gene, strain STM-24	LN890294	1411	GenBank	1737444 tax ID

[Ref.: #25119]

GC-content

69.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collectionsExternal links

[Ref.: #25119]

Culture collection no.

STM-24 , BCRC 80925, LMG 29291, KCTC 42984

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#25119

S. Y. L. Sheu, L. P.,Chen, W. M.: Novosphingobium bradum sp. nov., isolated from a spring. IJSEM 66: 5083 - 5090 2016 ( DOI 10.1099/ijsem.0.001475 )

* These References are textmined

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