Name: Carboxylicivirga flava Q15
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133257

Type strain:

Species: Carboxylicivirga flava

Strain Designation: Q15

Culture col. no.: CICC 23923, KCTC 42707

Strain history: <- Hui Wang, Yantai Institute of Costal Zone Research, Chinese Academy of Sciences

NCBI tax ID(s): 1740245 (species)

Section

Carboxylicivirga flava Q15 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from marine surface sediment.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Marinilabiliaceae*
	Genus	*Carboxylicivirga*
	Species	**Carboxylicivirga flava**
	Full Scientific Name (LPSN)	Carboxylicivirga flava Wang et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #25073]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #25073]	Cell length	2.5-18.7 µm

[Ref.: #25073]	Cell width	0.3-0.6 µm

[Ref.: #25073]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #25073]	Colony size	0.5-1.0 mm
[Ref.: #25073]	Colony color	orange
[Ref.: #25073]	Colony shape	circular
[Ref.: #25073]	Incubation period	3 days
[Ref.: #25073]	Cultivation medium used	MA plates

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25073]

Culture medium

MA plates

[Ref.: #25073]

Culture medium growth

		Temperature
[Ref.: #25073]	growth	20-37 °C
[Ref.: #25073]	optimum	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #25073]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25073]			optimum	7
[Ref.: #25073]			growth	5.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25073]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25073]		NaCl		growth	2.0-6.0	%(w/v)
[Ref.: #25073]		NaCl		optimum	2	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25073]	2,5-didehydro-D-gluconate ChEBI	-	carbon source
[Ref.: #25073]	amygdalin ChEBI	-	carbon source
[Ref.: #25073]	arbutin ChEBI	-	carbon source
[Ref.: #25073]	cellobiose ChEBI	+	carbon source
[Ref.: #25073]	D-arabinose ChEBI	-	carbon source
[Ref.: #25073]	D-fructose ChEBI	+	carbon source
[Ref.: #25073]	D-galactose ChEBI	-	carbon source
[Ref.: #25073]	D-mannose ChEBI	+	carbon source
[Ref.: #25073]	gentiobiose ChEBI	-	carbon source
[Ref.: #25073]	glucose ChEBI	+	carbon source
[Ref.: #25073]	inulin ChEBI	-	carbon source
[Ref.: #25073]	L-arabinose ChEBI	+	carbon source
[Ref.: #25073]	L-xylose ChEBI	-	carbon source
[Ref.: #25073]	lactose ChEBI	-	carbon source
[Ref.: #25073]	mannitol ChEBI	-	carbon source
[Ref.: #25073]	melezitose ChEBI	-	carbon source
[Ref.: #25073]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #25073]	raffinose ChEBI	-	carbon source
[Ref.: #25073]	salicin ChEBI	+	carbon source
[Ref.: #25073]	sucrose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #25073]	acid phosphatase	+	3.1.3.2
[Ref.: #25073]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25073]	alpha-galactosidase	+	3.2.1.22
[Ref.: #25073]	alpha-glucosidase	+	3.2.1.20
[Ref.: #25073]	beta-D-fucosidase	+	3.2.1.38
[Ref.: #25073]	beta-galactosidase	+	3.2.1.23
[Ref.: #25073]	beta-glucosidase	+	3.2.1.21
[Ref.: #25073]	chymotrypsin	+	3.4.4.5
[Ref.: #25073]	gelatinase	+
[Ref.: #25073]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #25073]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25073]	trypsin	+	3.4.21.4
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25073]	Sample type/isolated from	marine surface sediment
[Ref.: #25073]	Geographic location (country and/or sea, region)	Bohai Sea
[Ref.: #25073]	Country	China
[Ref.: #25073]	Country ISO 3 Code	CHN
[Ref.: #25073]	Continent	Asia
[Ref.: #25073]	Geographic location	37.0000°/120.0000°
[Ref.: #25073]	Enrichment culture duration	2 days
[Ref.: #25073]	Enrichment culture temperature	25 ̊C

[Ref.: #67771]	Sample type/isolated from	From sediment
[Ref.: #67771]	Geographic location (country and/or sea, region)	Bohai Sea
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KR809872 (>99% sequence identity) for Carboxylicivirga flava subclade from Microbeatlas

Aquatic Samples	80
Soil Samples
Animal Samples	9
Plant Samples
Total Samples	89

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25073]	Marinilabiliaceae bacterium Q15 16S ribosomal RNA gene, partial sequence	KR809872	1409	GenBank	1740245 tax ID

[Ref.: #25073]	GC-content	44.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	44.7 mol%

Availability in culture collections External links

[Ref.: #25073]

Culture collection no.

CICC 23923, KCTC 42707

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Carboxylicivirga flava sp. nov., isolated from marine surface sediment.	Wang H, Qi C, Chen W, Dong W, Tang H, Hu X	Int J Syst Evol Microbiol	10.1099/ijsem.0.001533	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25073

H. Q. Wang, C.,Chen, W.,Dong, W.,Tang, H.,Hu, X.: Carboxylicivirga flava sp. nov., isolated from marine surface sediment. IJSEM 66: 5412 - 5416 2016 ( DOI 10.1099/ijsem.0.001533 , PubMed 27692034 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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